RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 PFDN4Q9NQP4 134 aa14.46□□□□□ -0.09
CHCHD3-204ENST00000457942 RYDENQ9NUL5 291 aaKnown RBP14.46□□□□□ -0.09
CHCHD3-204ENST00000457942 NMRK1Q9NWW6 199 aa14.46□□□□□ -0.09
CHCHD3-204ENST00000457942 BCAP29Q9UHQ4 241 aa14.46□□□□□ -0.09
CHCHD3-204ENST00000457942 CNOT11Q9UKZ1 510 aaKnown RBP14.46□□□□□ -0.09
CHCHD3-204ENST00000457942 FAM215AQ9Y5M1 114 aa14.46□□□□□ -0.09
CHCHD3-204ENST00000457942 NPFFR2Q9Y5X5 522 aa14.46□□□□□ -0.09
CHCHD3-204ENST00000457942 C1orf226A1L170 272 aa14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 FAM47E-STBD1D6RA91 191 aa14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 SUPT7LO94864 414 aa14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 TOXO94900 526 aa14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 OR4F21O95013 312 aa14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 GABRA1P14867 456 aa14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 ENDOUP21128 410 aaKnown RBP14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 ECHS1P30084 290 aa14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 FEN1P39748 380 aaKnown RBP14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 PRRC2AP48634 2157 aaKnown RBP14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 SNTB1Q13884 538 aaKnown RBP14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 BICRALQ6AI39 1079 aa14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 WDR53Q7Z5U6 358 aaPredicted RBP14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 PACS2Q86VP3 889 aa14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 DMRTC2Q8IXT2 367 aaPredicted RBP14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 CLYBLQ8N0X4 340 aa14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 LRRC25Q8N386 305 aaPredicted RBP14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 VWA5B2Q8N398 1253 aa14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 ZNF441Q8N8Z8 693 aa14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 OR7G1Q8NGA0 311 aa14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 TP53INP1Q96A56 240 aa14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 RILPQ96NA2 401 aa14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 FAIM2Q9BWQ8 316 aa14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 QPCTLQ9NXS2 382 aa14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 DNAJB12Q9NXW2 375 aaKnown RBP14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 TRPS1Q9UHF7 1281 aa14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 NFU1Q9UMS0 254 aa14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 PCDHA9Q9Y5H5 950 aa14.45□□□□□ -0.1
CHCHD3-204ENST00000457942 A0A0G2JNJ9 132 aa14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 PPP6CO00743 305 aa14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 KRT6AP02538 564 aa14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 KRT6BP04259 564 aa14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 HMOX2P30519 316 aa14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 KRT6CP48668 564 aa14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 CLCQ05315 142 aa14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 FUT7Q11130 342 aa14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 CES4AQ5XG92 561 aa14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 RTL6Q6ICC9 239 aa14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 SLC48A1Q6P1K1 146 aa14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 GSPT2Q8IYD1 628 aaKnown RBP14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 C1orf52Q8N6N3 182 aaKnown RBP14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 CDYL2Q8N8U2 506 aa14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 MYRIPQ8NFW9 859 aa14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 NEIL3Q8TAT5 605 aa14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 SPPL2AQ8TCT8 520 aa14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 FOXC2Q99958 501 aa14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 METTL7AQ9H8H3 244 aa14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 BRF2Q9HAW0 419 aa14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 PROK2Q9HC23 129 aa14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 Q9UFV3 132 aa14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 PSME2Q9UL46 239 aa14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 CFL2Q9Y281 166 aa14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 PLEKHA6Q9Y2H5 1048 aa14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 ZNF780BQ9Y6R6 833 aa14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 VPS13CQ709C8 3753 aa14.44□□□□□ -0.1
CHCHD3-204ENST00000457942 HOXD4P09016 255 aaPredicted RBP14.43□□□□□ -0.1
CHCHD3-204ENST00000457942 CSNK2A2P19784 350 aaPredicted RBP14.43□□□□□ -0.1
CHCHD3-204ENST00000457942 GPX3P22352 226 aa14.43□□□□□ -0.1
CHCHD3-204ENST00000457942 ADH7P40394 386 aa14.43□□□□□ -0.1
CHCHD3-204ENST00000457942 GALNT1Q10472 559 aaPredicted RBP14.43□□□□□ -0.1
CHCHD3-204ENST00000457942 DUSP8Q13202 625 aa14.43□□□□□ -0.1
CHCHD3-204ENST00000457942 EXOSC7Q15024 291 aaKnown RBP14.43□□□□□ -0.1
CHCHD3-204ENST00000457942 RASA2Q15283 850 aa14.43□□□□□ -0.1
CHCHD3-204ENST00000457942 TCHHL1Q5QJ38 904 aaPredicted RBP14.43□□□□□ -0.1
CHCHD3-204ENST00000457942 FAM219BQ5XKK7 198 aa14.43□□□□□ -0.1
CHCHD3-204ENST00000457942 FAM111BQ6SJ93 734 aa14.43□□□□□ -0.1
CHCHD3-204ENST00000457942 ZNF615Q8N8J6 731 aa14.43□□□□□ -0.1
CHCHD3-204ENST00000457942 ADCY4Q8NFM4 1077 aa14.43□□□□□ -0.1
CHCHD3-204ENST00000457942 MTBPQ96DY7 904 aa14.43□□□□□ -0.1
CHCHD3-204ENST00000457942 SMR3AQ99954 134 aa14.43□□□□□ -0.1
CHCHD3-204ENST00000457942 ITPAQ9BY32 194 aa14.43□□□□□ -0.1
CHCHD3-204ENST00000457942 CXXC4Q9H2H0 198 aa14.43□□□□□ -0.1
CHCHD3-204ENST00000457942 ACKR4Q9NPB9 350 aa14.43□□□□□ -0.1
CHCHD3-204ENST00000457942 ANKRD33BA6NCL7 494 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 GNB5O14775 395 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 TRIM3O75382 744 aaPredicted RBP14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 SNX4O95219 450 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 ABHD2P08910 425 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 SBK3P0C264 359 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 ABCD3P28288 659 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 PLCXD2Q0VAA5 305 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 SLC25A35Q3KQZ1 300 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 FAM180BQ6P0A1 224 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 GPRIN3Q6ZVF9 776 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 IFT20Q8IY31 132 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 ZZZ3Q8IYH5 903 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 ULK2Q8IYT8 1036 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 C17orf47Q8NEP4 570 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 ADIPOR1Q96A54 375 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 TM4SF18Q96CE8 201 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 TMEM237Q96Q45 408 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 SECISBP2Q96T21 854 aaKnown RBP14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 GPATCH1Q9BRR8 931 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms