RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 SLC38A5Q8WUX1 472 aa5.61□□□□□ -1.51
SDC4P-201ENST00000453285 HOXB13Q92826 284 aaPredicted RBP5.61□□□□□ -1.51
SDC4P-201ENST00000453285 FAM162AQ96A26 154 aa5.61□□□□□ -1.51
SDC4P-201ENST00000453285 RNF31Q96EP0 1072 aa5.61□□□□□ -1.51
SDC4P-201ENST00000453285 SLC35A4Q96G79 324 aa5.61□□□□□ -1.51
SDC4P-201ENST00000453285 PYURFQ96I23 114 aa5.61□□□□□ -1.51
SDC4P-201ENST00000453285 MAGED4Q96JG8 741 aa5.61□□□□□ -1.51
SDC4P-201ENST00000453285 OR1F2PQ96R84 312 aa5.61□□□□□ -1.51
SDC4P-201ENST00000453285 OR7D2Q96RA2 312 aa5.61□□□□□ -1.51
SDC4P-201ENST00000453285 CDC6Q99741 560 aa5.61□□□□□ -1.51
SDC4P-201ENST00000453285 YIPF4Q9BSR8 244 aa5.61□□□□□ -1.51
SDC4P-201ENST00000453285 ALOXE3Q9BYJ1 711 aa5.61□□□□□ -1.51
SDC4P-201ENST00000453285 TGIF2Q9GZN2 237 aa5.61□□□□□ -1.51
SDC4P-201ENST00000453285 CXorf21Q9HAI6 301 aa5.61□□□□□ -1.51
SDC4P-201ENST00000453285 C3orf14Q9HBI5 128 aa5.61□□□□□ -1.51
SDC4P-201ENST00000453285 FBXO8Q9NRD0 319 aa5.61□□□□□ -1.51
SDC4P-201ENST00000453285 PTGFRNQ9P2B2 879 aa5.61□□□□□ -1.51
SDC4P-201ENST00000453285 NCDNQ9UBB6 729 aa5.61□□□□□ -1.51
SDC4P-201ENST00000453285 TRPC4Q9UBN4 977 aa5.61□□□□□ -1.51
SDC4P-201ENST00000453285 MED13Q9UHV7 2174 aa5.61□□□□□ -1.51
SDC4P-201ENST00000453285 ANAPC2Q9UJX6 822 aa5.61□□□□□ -1.51
SDC4P-201ENST00000453285 ANGPTL2Q9UKU9 493 aa5.61□□□□□ -1.51
SDC4P-201ENST00000453285 SRPK3Q9UPE1 567 aa5.61□□□□□ -1.51
SDC4P-201ENST00000453285 MRPS33Q9Y291 106 aaKnown RBP5.61□□□□□ -1.51
SDC4P-201ENST00000453285 MMACHCQ9Y4U1 282 aa5.61□□□□□ -1.51
SDC4P-201ENST00000453285 FREM3P0C091 2139 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 A0A1W2PNU3 283 aaPredicted RBP5.6□□□□□ -1.51
SDC4P-201ENST00000453285 TCRBV16S1A1N1A0A5B0 115 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 VSTM2BA6NLU5 285 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 B4E171 279 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 M0QX08 132 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 HRKO00198 91 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 POLR1CO15160 346 aaPredicted RBP5.6□□□□□ -1.51
SDC4P-201ENST00000453285 HNRNPRO43390 633 aaKnown RBP5.6□□□□□ -1.51
SDC4P-201ENST00000453285 ASNA1O43681 348 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 CNOT3O75175 753 aaKnown RBP5.6□□□□□ -1.51
SDC4P-201ENST00000453285 GMNNO75496 209 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 TIPRLO75663 272 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 RFPL3O75679 317 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 PRKD3O94806 890 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 DKK1O94907 266 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 PGM3O95394 542 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 CLPSP04118 112 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 HBQ1P09105 142 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 ACP2P11117 423 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 ZNF28P17035 718 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 ETV5P41161 510 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 TSPAN7P41732 249 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 PTDSS1P48651 473 aaKnown RBP5.6□□□□□ -1.51
SDC4P-201ENST00000453285 PRIM2P49643 509 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 KHKP50053 298 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 CLCN2P51788 898 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 CLDN6P56747 220 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 SELENOWP63302 87 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 TXNL4AP83876 142 aaKnown RBP5.6□□□□□ -1.51
SDC4P-201ENST00000453285 FUT7Q11130 342 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 STX4Q12846 297 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 SERTAD2Q14140 314 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 ELOAQ14241 798 aaKnown RBP5.6□□□□□ -1.51
SDC4P-201ENST00000453285 MAP7Q14244 749 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 EXOSC7Q15024 291 aaKnown RBP5.6□□□□□ -1.51
SDC4P-201ENST00000453285 SYPL1Q16563 259 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 ISXQ2M1V0 245 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.6□□□□□ -1.51
SDC4P-201ENST00000453285 NKAIN1Q4KMZ8 207 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 CYBRD1Q53TN4 286 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 TBCELQ5QJ74 424 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 ARHGAP40Q5TG30 622 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 STPG1Q5TH74 334 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 AP1ARQ63HQ0 302 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 LPCAT4Q643R3 524 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 HEPHL1Q6MZM0 1159 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 REEP3Q6NUK4 255 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 MFSD12Q6NUT3 480 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 CDC73Q6P1J9 531 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 ZCCHC12Q6PEW1 402 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 BHLHB9Q6PI77 547 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 LRRC74BQ6ZQY2 392 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 EIF3MQ7L2H7 374 aaKnown RBP5.6□□□□□ -1.51
SDC4P-201ENST00000453285 OLIG3Q7RTU3 272 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 OVCH1Q7RTY7 1134 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 ERMP1Q7Z2K6 904 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 WDR53Q7Z5U6 358 aaPredicted RBP5.6□□□□□ -1.51
SDC4P-201ENST00000453285 TSEN54Q7Z6J9 526 aaKnown RBP5.6□□□□□ -1.51
SDC4P-201ENST00000453285 AMIGO2Q86SJ2 522 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 GLRX5Q86SX6 157 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 SLCO6A1Q86UG4 719 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 TMEM126BQ8IUX1 230 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 SLC30A8Q8IWU4 369 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 EID3Q8N140 333 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 METTL25Q8N6Q8 603 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 ANKFN1Q8N957 763 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 SLC16A11Q8NCK7 471 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 OR10Q1Q8NGQ4 319 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 FBXO30Q8TB52 745 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 PTPMT1Q8WUK0 201 aaPredicted RBP5.6□□□□□ -1.51
SDC4P-201ENST00000453285 XAGE5Q8WWM1 108 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 LRTOMTQ8WZ04 291 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 TSLPQ969D9 159 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 NCLNQ969V3 563 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms