RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 PTX3P26022 381 aaPredicted RBP16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 MEOX1P50221 254 aa16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 GPR143P51810 404 aa16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 ACSM2AQ08AH3 577 aa16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 KRT72Q14CN4 511 aa16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 KIAA0040Q15053 153 aa16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 PDCD4Q53EL6 469 aaKnown RBP16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 KHDRBS2Q5VWX1 349 aaKnown RBP16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 ACSM2BQ68CK6 577 aa16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 HSDL2Q6YN16 418 aa16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 ZNF227Q86WZ6 799 aa16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 SIAH3Q8IW03 269 aa16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 SULF2Q8IWU5 870 aa16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 FAM9CQ8IZT9 166 aa16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 RNF175Q8N4F7 328 aa16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 ZNF808Q8N4W9 903 aaPredicted RBP16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 POGLUT1Q8NBL1 392 aa16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 MORN4Q8NDC4 146 aa16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 OR14A16Q8NHC5 309 aa16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 ITLN2Q8WWU7 325 aaPredicted RBP16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 MARK4Q96L34 752 aa16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 C1orf50Q9BV19 199 aa16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 CCDC106Q9BWC9 280 aa16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 OR8D2Q9GZM6 311 aa16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 LIN28AQ9H9Z2 209 aaKnown RBP16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 SDR39U1Q9NRG7 319 aaPredicted RBP16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 TMEM45AQ9NWC5 275 aa16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 HPF1Q9NWY4 346 aa16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 SIRT5Q9NXA8 310 aa16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 ARMCX1Q9P291 453 aa16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 ENTPD4Q9Y227 616 aa16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 POLR3HQ9Y535 204 aaPredicted RBP16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 CELSR2Q9HCU4 2923 aa16.71■□□□□ 0.27
SQSTM1-204ENST00000453046 TFECO14948 347 aaPredicted RBP16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 HNRNPRO43390 633 aaKnown RBP16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 PEX1O43933 1283 aa16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 SEC22BO75396 215 aa16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 OR2J2O76002 312 aa16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 UBOX5O94941 541 aa16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 PRPS2P11908 318 aa16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 PRDX6P30041 224 aa16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 ARFIP1P53367 373 aa16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 ID2Q02363 134 aa16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 TBL3Q12788 808 aaKnown RBP16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 KLF10Q13118 480 aa16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 SLAMF1Q13291 335 aa16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 ART3Q13508 389 aa16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 RFTN2Q52LD8 501 aaPredicted RBP16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 DEPDC1Q5TB30 811 aa16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 OR4C11Q6IEV9 310 aa16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 CCDC121Q6ZUS5 278 aa16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 YTHDF3Q7Z739 585 aaKnown RBP16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 MIER2Q8N344 545 aa16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 C7orf57Q8NEG2 295 aa16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 PTPMT1Q8WUK0 201 aaPredicted RBP16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 ASB15Q8WXK1 588 aa16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 RGMAQ96B86 450 aa16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 C11orf24Q96F05 449 aaPredicted RBP16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 APIPQ96GX9 242 aa16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 TIMMDC1Q9NPL8 285 aa16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 AHSPQ9NZD4 102 aa16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 ZIM2Q9NZV7 527 aa16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 ZNF835Q9Y2P0 537 aa16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 GPR45Q9Y5Y3 372 aa16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 ITPR2Q14571 2701 aa16.7■□□□□ 0.26
SQSTM1-204ENST00000453046 C17orf105B2RV13 164 aa16.69■□□□□ 0.26
SQSTM1-204ENST00000453046 WWP2O00308 870 aa16.69■□□□□ 0.26
SQSTM1-204ENST00000453046 PRKNO60260 465 aaPredicted RBP16.69■□□□□ 0.26
SQSTM1-204ENST00000453046 COX7A2P14406 83 aa16.69■□□□□ 0.26
SQSTM1-204ENST00000453046 TIA1P31483 386 aaKnown RBP eCLIP16.69■□□□□ 0.262e-7■■□□□ 14.2
SQSTM1-204ENST00000453046 RFC3P40938 356 aa16.69■□□□□ 0.26
SQSTM1-204ENST00000453046 SMSP52788 366 aa16.69■□□□□ 0.26
SQSTM1-204ENST00000453046 DIO3P55073 304 aa16.69■□□□□ 0.26
SQSTM1-204ENST00000453046 HSF1Q00613 529 aa16.69■□□□□ 0.26
SQSTM1-204ENST00000453046 MAPRE2Q15555 327 aa16.69■□□□□ 0.26
SQSTM1-204ENST00000453046 RNFT1Q5M7Z0 435 aa16.69■□□□□ 0.26
SQSTM1-204ENST00000453046 IL23RQ5VWK5 629 aa16.69■□□□□ 0.26
SQSTM1-204ENST00000453046 GALNT18Q6P9A2 607 aa16.69■□□□□ 0.26
SQSTM1-204ENST00000453046 IL20RBQ6UXL0 311 aa16.69■□□□□ 0.26
SQSTM1-204ENST00000453046 C16orf47Q6ZP98 133 aaPredicted RBP16.69■□□□□ 0.26
SQSTM1-204ENST00000453046 MDGA2Q7Z553 956 aa16.69■□□□□ 0.26
SQSTM1-204ENST00000453046 TREML1Q86YW5 311 aa16.69■□□□□ 0.26
SQSTM1-204ENST00000453046 METTL4Q8N3J2 472 aa16.69■□□□□ 0.26
SQSTM1-204ENST00000453046 CHTF18Q8WVB6 975 aa16.69■□□□□ 0.26
SQSTM1-204ENST00000453046 MARVELD3Q96A59 401 aa16.69■□□□□ 0.26
SQSTM1-204ENST00000453046 RUBCNLQ9H714 662 aa16.69■□□□□ 0.26
SQSTM1-204ENST00000453046 MS4A12Q9NXJ0 267 aa16.69■□□□□ 0.26
SQSTM1-204ENST00000453046 MYOTQ9UBF9 498 aa16.69■□□□□ 0.26
SQSTM1-204ENST00000453046 COPS7AQ9UBW8 275 aa16.69■□□□□ 0.26
SQSTM1-204ENST00000453046 KLF2Q9Y5W3 355 aaPredicted RBP16.69■□□□□ 0.26
SQSTM1-204ENST00000453046 PRRG2O14669 202 aa16.68■□□□□ 0.26
SQSTM1-204ENST00000453046 DYRK3O43781 588 aa16.68■□□□□ 0.26
SQSTM1-204ENST00000453046 CDC40O60508 579 aaKnown RBP eCLIP16.68■□□□□ 0.263e-6■□□□□ 9.5
SQSTM1-204ENST00000453046 SCELO95171 688 aa16.68■□□□□ 0.26
SQSTM1-204ENST00000453046 PIK3R1P27986 724 aa16.68■□□□□ 0.26
SQSTM1-204ENST00000453046 TLX1P31314 330 aaPredicted RBP16.68■□□□□ 0.26
SQSTM1-204ENST00000453046 GPR85P60893 370 aa16.68■□□□□ 0.26
SQSTM1-204ENST00000453046 RPS6KA2Q15349 733 aa16.68■□□□□ 0.26
SQSTM1-204ENST00000453046 XKRXQ6PP77 449 aa16.68■□□□□ 0.26
SQSTM1-204ENST00000453046 CYP20A1Q6UW02 462 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms