RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 GOLGA5Q8TBA6 731 aa4.34□□□□□ -1.71
HMGB1P26-201ENST00000452520 BRSK1Q8TDC3 778 aa4.34□□□□□ -1.71
HMGB1P26-201ENST00000452520 NT5C3BQ969T7 300 aa4.34□□□□□ -1.71
HMGB1P26-201ENST00000452520 VSTM2LQ96N03 204 aa4.34□□□□□ -1.71
HMGB1P26-201ENST00000452520 ACCSQ96QU6 501 aa4.34□□□□□ -1.71
HMGB1P26-201ENST00000452520 LPAR4Q99677 370 aa4.34□□□□□ -1.71
HMGB1P26-201ENST00000452520 FUCA2Q9BTY2 467 aa4.34□□□□□ -1.71
HMGB1P26-201ENST00000452520 RBM4Q9BWF3 364 aaKnown RBP4.34□□□□□ -1.71
HMGB1P26-201ENST00000452520 KAT8Q9H7Z6 458 aaKnown RBP4.34□□□□□ -1.71
HMGB1P26-201ENST00000452520 MEAF6Q9HAF1 191 aa4.34□□□□□ -1.71
HMGB1P26-201ENST00000452520 C3orf14Q9HBI5 128 aa4.34□□□□□ -1.71
HMGB1P26-201ENST00000452520 GDF3Q9NR23 364 aa4.34□□□□□ -1.71
HMGB1P26-201ENST00000452520 C6orf203Q9P0P8 240 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P26-201ENST00000452520 RNF14Q9UBS8 474 aa4.34□□□□□ -1.71
HMGB1P26-201ENST00000452520 CAB39Q9Y376 341 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P26-201ENST00000452520 KIF7Q2M1P5 1343 aa4.34□□□□□ -1.71
HMGB1P26-201ENST00000452520 KIF16BQ96L93 1317 aa4.34□□□□□ -1.71
HMGB1P26-201ENST00000452520 SPATA31D1Q6ZQQ2 1576 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 A0A087X002 238 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 LMO7DNF2Z398 122 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 H0Y8G0 127 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 PRRG1O14668 218 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 ZNF208O43345 1280 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 LYNP07948 512 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 SLC2A2P11168 524 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 TSPAN8P19075 237 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 HNF1AP20823 631 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 CYLC1P35663 651 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 LEPRP48357 1165 aaKnown RBP4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 BACE1P56817 501 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 PPIAP62937 165 aaKnown RBP4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 ZNF74Q16587 644 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 ACSF3Q4G176 576 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 ATF7IP2Q5U623 682 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 GFI1BQ5VTD9 330 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 PYHIN1Q6K0P9 492 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 BHLHB9Q6PI77 547 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 LEKR1Q6ZMV7 388 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 ASRGL1Q7L266 308 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 PTAR1Q7Z6K3 402 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 GPBP1Q86WP2 473 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 EFCAB13Q8IY85 973 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 RDH11Q8TC12 318 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 CASP10Q92851 521 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 TPD52L3Q96J77 140 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 LURAP1Q96LR2 239 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 IL12RB2Q99665 862 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 NKX3-1Q99801 234 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 KRTAP17-1Q9BYP8 105 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 BARHL1Q9BZE3 327 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 CRNKL1Q9BZJ0 848 aaKnown RBP4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 MAGT1Q9H0U3 335 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 METTL7AQ9H8H3 244 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 MAN2C1Q9NTJ4 1040 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 MED17Q9NVC6 651 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 HYPKQ9NX55 129 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 PLCL2Q9UPR0 1127 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 NIP7Q9Y221 180 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 MRPS28Q9Y2Q9 187 aaKnown RBP4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 OR10H1Q9Y4A9 318 aa4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 KLF2Q9Y5W3 355 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P26-201ENST00000452520 MEIOCA2RUB1 952 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 MFSD2BA6NFX1 497 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 LRRC30A6NM36 301 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 CCSO14618 274 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 EDIL3O43854 480 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 BCAS1O75363 584 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 ANXA9O76027 345 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 STK17BO94768 372 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 SEC24AO95486 1093 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 IGLV1-44P01699 117 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 UQCRFS1P1P0C7P4 283 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 GZMAP12544 262 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 UQCRC2P22695 453 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 MATKP42679 507 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 RPS4XP62701 263 aaKnown RBP4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 PJVKQ0ZLH3 352 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 IDI1Q13907 227 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 HNRNPDQ14103 355 aaKnown RBP4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 CAMK4Q16566 473 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 LINC01620Q4KN68 170 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 SPANXN4Q5MJ08 99 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 PHYHD1Q5SRE7 291 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 ADAMTSL4-AS1Q5T5F5 129 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 ATP1A1-AS1Q5TC04 95 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 ZNF841Q6ZN19 808 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 DPY19L2P2Q6ZN68 376 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 CENPUQ71F23 418 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 EFL1Q7Z2Z2 1120 aaKnown RBP4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 HOGA1Q86XE5 327 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 UBQLNLQ8IYU4 475 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 DND1Q8IYX4 353 aaKnown RBP4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 RAET1EQ8TD07 263 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 NR4A3Q92570 626 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 MRPL24Q96A35 216 aaKnown RBP4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 DCTN5Q9BTE1 182 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 RAB11FIP5Q9BXF6 653 aa4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 FNDC4Q9H6D8 234 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 RPAP3Q9H6T3 665 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P26-201ENST00000452520 SLC25A19Q9HC21 320 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms