RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 LTB4RQ15722 352 aa18.45■□□□□ 0.54
COL9A3-202ENST00000452372 INAQ16352 499 aa18.45■□□□□ 0.54
COL9A3-202ENST00000452372 TRMT12Q53H54 448 aaKnown RBP18.45■□□□□ 0.54
COL9A3-202ENST00000452372 ZNF628Q5EBL2 1059 aa18.45■□□□□ 0.54
COL9A3-202ENST00000452372 IL23RQ5VWK5 629 aa18.45■□□□□ 0.54
COL9A3-202ENST00000452372 GPALPP1Q8IXQ4 340 aa18.45■□□□□ 0.54
COL9A3-202ENST00000452372 LIX1Q8N485 282 aa18.45■□□□□ 0.54
COL9A3-202ENST00000452372 TMEM178AQ8NBL3 297 aa18.45■□□□□ 0.54
COL9A3-202ENST00000452372 CLHC1Q8NHS4 586 aa18.45■□□□□ 0.54
COL9A3-202ENST00000452372 ASB15Q8WXK1 588 aa18.45■□□□□ 0.54
COL9A3-202ENST00000452372 ERP27Q96DN0 273 aa18.45■□□□□ 0.54
COL9A3-202ENST00000452372 MTERF3Q96E29 417 aa18.45■□□□□ 0.54
COL9A3-202ENST00000452372 PPP1R36Q96LQ0 422 aa18.45■□□□□ 0.54
COL9A3-202ENST00000452372 C5orf34Q96MH7 638 aa18.45■□□□□ 0.54
COL9A3-202ENST00000452372 C1orf50Q9BV19 199 aa18.45■□□□□ 0.54
COL9A3-202ENST00000452372 NUF2Q9BZD4 464 aa18.45■□□□□ 0.54
COL9A3-202ENST00000452372 ACBD3Q9H3P7 528 aa18.45■□□□□ 0.54
COL9A3-202ENST00000452372 ERRFI1Q9UJM3 462 aaPredicted RBP18.45■□□□□ 0.54
COL9A3-202ENST00000452372 C2orf92A0A1B0GVN3 265 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 A8MVJ9 347 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 AKAP10O43572 662 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 ZNF354AO60765 605 aaPredicted RBP18.44■□□□□ 0.54
COL9A3-202ENST00000452372 SLC25A12O75746 678 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 OR6B1O95007 311 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 LRATO95237 230 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 CBX7O95931 251 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 PCSK2P16519 638 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 SOX3P41225 446 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 MRPS35P82673 323 aaKnown RBP18.44■□□□□ 0.54
COL9A3-202ENST00000452372 OPN5Q6U736 354 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 R3HCC1LQ7Z5L2 792 aaKnown RBP18.44■□□□□ 0.54
COL9A3-202ENST00000452372 LRRC34Q8IZ02 419 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 FAM9CQ8IZT9 166 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 CYP4Z2PQ8N1L4 340 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 SLC15A4Q8N697 577 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 ZNF441Q8N8Z8 693 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 OR9A2Q8NGT5 310 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 C16orf52Q8NHV5 167 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 TP53INP1Q96A56 240 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 TMEM125Q96AQ2 219 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 GAL3ST4Q96RP7 486 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 HES7Q9BYE0 225 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 MEAF6Q9HAF1 191 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 AGPAT4Q9NRZ5 378 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 HPF1Q9NWY4 346 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 ASIC5Q9NY37 505 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 BCAP29Q9UHQ4 241 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 EIF3LQ9Y262 564 aaKnown RBP18.44■□□□□ 0.54
COL9A3-202ENST00000452372 CFL2Q9Y281 166 aa18.44■□□□□ 0.54
COL9A3-202ENST00000452372 UQCRHLA0A096LP55 91 aa18.43■□□□□ 0.54
COL9A3-202ENST00000452372 SLCO1B7G3V0H7 640 aa18.43■□□□□ 0.54
COL9A3-202ENST00000452372 BCAS2O75934 225 aaPredicted RBP18.43■□□□□ 0.54
COL9A3-202ENST00000452372 RASAL1O95294 804 aa18.43■□□□□ 0.54
COL9A3-202ENST00000452372 NADKO95544 446 aaPredicted RBP18.43■□□□□ 0.54
COL9A3-202ENST00000452372 NTSP30990 170 aa18.43■□□□□ 0.54
COL9A3-202ENST00000452372 NCBP2P52298 156 aaKnown RBP eCLIP18.43■□□□□ 0.54
COL9A3-202ENST00000452372 DUSP8Q13202 625 aa18.43■□□□□ 0.54
COL9A3-202ENST00000452372 PTGR1Q14914 329 aa18.43■□□□□ 0.54
COL9A3-202ENST00000452372 EXOSC7Q15024 291 aaKnown RBP18.43■□□□□ 0.54
COL9A3-202ENST00000452372 HLA-DQA1Q5Y7H0 255 aa18.43■□□□□ 0.54
COL9A3-202ENST00000452372 IL20RBQ6UXL0 311 aa18.43■□□□□ 0.54
COL9A3-202ENST00000452372 SIMC1Q8NDZ2 872 aa18.43■□□□□ 0.54
COL9A3-202ENST00000452372 C17orf47Q8NEP4 570 aa18.43■□□□□ 0.54
COL9A3-202ENST00000452372 SLC22A8Q8TCC7 542 aa18.43■□□□□ 0.54
COL9A3-202ENST00000452372 GRHL3Q8TE85 626 aa18.43■□□□□ 0.54
COL9A3-202ENST00000452372 KAT2AQ92830 837 aa18.43■□□□□ 0.54
COL9A3-202ENST00000452372 ADIPOR1Q96A54 375 aa18.43■□□□□ 0.54
COL9A3-202ENST00000452372 PPCDCQ96CD2 204 aa18.43■□□□□ 0.54
COL9A3-202ENST00000452372 TAAR6Q96RI8 345 aa18.43■□□□□ 0.54
COL9A3-202ENST00000452372 GLIPR2Q9H4G4 154 aa18.43■□□□□ 0.54
COL9A3-202ENST00000452372 KLHL1Q9NR64 748 aa18.43■□□□□ 0.54
COL9A3-202ENST00000452372 SH3BP4Q9P0V3 963 aa18.43■□□□□ 0.54
COL9A3-202ENST00000452372 ATP6V1HQ9UI12 483 aa18.43■□□□□ 0.54
COL9A3-202ENST00000452372 ERVK-11Q9UQG0 969 aa18.43■□□□□ 0.54
COL9A3-202ENST00000452372 HDAC3O15379 428 aa18.42■□□□□ 0.54
COL9A3-202ENST00000452372 NME2P1O60361 137 aa18.42■□□□□ 0.54
COL9A3-202ENST00000452372 PLOD3O60568 738 aa18.42■□□□□ 0.54
COL9A3-202ENST00000452372 SLITRK5O94991 958 aa18.42■□□□□ 0.54
COL9A3-202ENST00000452372 LDLRP01130 860 aa18.42■□□□□ 0.54
COL9A3-202ENST00000452372 NME2P22392 152 aa18.42■□□□□ 0.54
COL9A3-202ENST00000452372 RPL3P39023 403 aaKnown RBP18.42■□□□□ 0.54
COL9A3-202ENST00000452372 MAPKAPK3Q16644 382 aa18.42■□□□□ 0.54
COL9A3-202ENST00000452372 ANKRD26P1Q6NSI1 321 aa18.42■□□□□ 0.54
COL9A3-202ENST00000452372 FAM180AQ6UWF9 173 aa18.42■□□□□ 0.54
COL9A3-202ENST00000452372 LARP4Q71RC2 724 aaKnown RBP eCLIP18.42■□□□□ 0.54
COL9A3-202ENST00000452372 GALNTL5Q7Z4T8 443 aa18.42■□□□□ 0.54
COL9A3-202ENST00000452372 MDGA2Q7Z553 956 aa18.42■□□□□ 0.54
COL9A3-202ENST00000452372 WDR75Q8IWA0 830 aaKnown RBP18.42■□□□□ 0.54
COL9A3-202ENST00000452372 TAGAPQ8N103 731 aa18.42■□□□□ 0.54
COL9A3-202ENST00000452372 OR52R1Q8NGF1 315 aa18.42■□□□□ 0.54
COL9A3-202ENST00000452372 FAR1Q8WVX9 515 aa18.42■□□□□ 0.54
COL9A3-202ENST00000452372 AMDHD1Q96NU7 426 aa18.42■□□□□ 0.54
COL9A3-202ENST00000452372 INTS9Q9NV88 658 aaKnown RBP18.42■□□□□ 0.54
COL9A3-202ENST00000452372 NOP53Q9NZM5 478 aaKnown RBP18.42■□□□□ 0.54
COL9A3-202ENST00000452372 ANKUB1A6NFN9 424 aa18.41■□□□□ 0.54
COL9A3-202ENST00000452372 TRPC5OSA6NMA1 111 aa18.41■□□□□ 0.54
COL9A3-202ENST00000452372 PLOD2O00469 737 aa18.41■□□□□ 0.54
COL9A3-202ENST00000452372 PDPK1O15530 556 aa18.41■□□□□ 0.54
COL9A3-202ENST00000452372 KITP10721 976 aa18.41■□□□□ 0.54
COL9A3-202ENST00000452372 G6PDP11413 515 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms