RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 CIDECQ96AQ7 238 aaPredicted RBP13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 SPATA9Q9BWV2 254 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 B3GAT2Q9NPZ5 323 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 TIGARQ9NQ88 270 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 ADAM30Q9UKF2 790 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 NPIPA1Q9UND3 350 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 A0A0G2JMZ2 1700 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 TRBV11-1A0A0K0K1C0 115 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 LILRA5A6NI73 299 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 OR7A17O14581 309 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 DBIP07108 87 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 ETFAP13804 333 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 DNAJA1P31689 397 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 CD47Q08722 323 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 TIMM50Q3ZCQ8 353 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 CARM1Q86X55 608 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 UBE2J2Q8N2K1 259 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 TOR1AIP2Q8NFQ8 470 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 RFKQ969G6 155 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 BMFQ96LC9 184 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 FER1L6-AS2Q96M78 137 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 MAPKAP1Q9BPZ7 522 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 SLC6A16Q9GZN6 736 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 HMGN1P05114 100 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 EPHA8P29322 1005 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 BCL6P41182 706 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 RNF220Q5VTB9 566 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 KIAA1614Q5VZ46 1190 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 ISLR2Q6UXK2 745 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 ESX1Q8N693 406 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 CCNB1IP1Q9NPC3 277 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 C11orf16Q9NQ32 467 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 UBAP1Q9NZ09 502 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 KCMF1Q9P0J7 381 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 WDR37Q9Y2I8 494 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 GSTK1Q9Y2Q3 226 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 LOXL2Q9Y4K0 774 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 RFPL3O75679 317 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 AIFM1O95831 613 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 ST6GAL1P15907 406 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 KDELR2P33947 212 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 RNF144AP50876 292 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 MERTKQ12866 999 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 NKAIN1Q4KMZ8 207 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 COQ5Q5HYK3 327 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 SPANXN2Q5MJ10 180 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 ZCCHC12Q6PEW1 402 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 BTNL2Q9UIR0 455 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 CSNK1G3Q9Y6M4 447 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 CDC14CA4D256 554 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 RNASET2O00584 256 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 TP73O15350 636 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 TRIM3O75382 744 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 IFI30P13284 250 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 MYF5P13349 255 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 KCNAB1Q14722 419 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 TMEM71Q6P5X7 295 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 WASH2PQ6VEQ5 465 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 HMGN2P46Q86SG4 172 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 UBQLNLQ8IYU4 475 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 CRIPAKQ8N1N5 446 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 ISL2Q96A47 359 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 CCDC106Q9BWC9 280 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 TOR4AQ9NXH8 423 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 TVP23BQ9NYZ1 205 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 PTGFRNQ9P2B2 879 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 TMEM5Q9Y2B1 443 aa13.32□□□□□ -0.28
SMARCA4-204ENST00000444061 A0A1W2PQF6 199 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 SOX1O00570 391 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 TAPBPO15533 448 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 STARD6P59095 220 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 RPS3AP61247 264 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 TNFRSF17Q02223 184 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 ZNF846Q147U1 533 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 LCN1P1Q5VSP4 162 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 YOD1Q5VVQ6 348 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 OPN5Q6U736 354 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 C6orf15Q6UXA7 325 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 UBE2Q1Q7Z7E8 422 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 OR14A16Q8NHC5 309 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 TMEM19Q96HH6 336 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 DPH2Q9BQC3 489 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 DGCR6LQ9BY27 220 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 TRIM8Q9BZR9 551 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 TWSG1Q9GZX9 223 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 MTHFD2LQ9H903 347 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 MPZL2O60487 215 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 TRIM23P36406 574 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 CDK9P50750 372 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 TMEM225Q6GV28 225 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 PRR22Q8IZ63 422 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 EGLN2Q96KS0 407 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 FCRL4Q96PJ5 515 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 WDR12Q9GZL7 423 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 RPRD1BQ9NQG5 326 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 TMEM45AQ9NWC5 275 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 MICAL3Q7RTP6 2002 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 GABRR3A8MPY1 467 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 BLOC1S5-TXNDC5H3BN57 136 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms