RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 MRPS35P82673 323 aaKnown RBP21.8■■□□□ 1.08
VARS-217ENST00000440048 RBPJQ06330 500 aa21.8■■□□□ 1.08
VARS-217ENST00000440048 MPP2Q14168 576 aa21.8■■□□□ 1.08
VARS-217ENST00000440048 CEBPEQ15744 281 aa21.8■■□□□ 1.08
VARS-217ENST00000440048 ZNF628Q5EBL2 1059 aa21.8■■□□□ 1.08
VARS-217ENST00000440048 CES4AQ5XG92 561 aa21.8■■□□□ 1.08
VARS-217ENST00000440048 TICAM1Q8IUC6 712 aa21.8■■□□□ 1.08
VARS-217ENST00000440048 DND1Q8IYX4 353 aaKnown RBP21.8■■□□□ 1.08
VARS-217ENST00000440048 OR9A2Q8NGT5 310 aa21.8■■□□□ 1.08
VARS-217ENST00000440048 FCRL1Q96LA6 429 aa21.8■■□□□ 1.08
VARS-217ENST00000440048 KCNK9Q9NPC2 374 aa21.8■■□□□ 1.08
VARS-217ENST00000440048 ZDHHC2Q9UIJ5 367 aa21.8■■□□□ 1.08
VARS-217ENST00000440048 TFECO14948 347 aaPredicted RBP21.79■■□□□ 1.08
VARS-217ENST00000440048 LSM1O15116 133 aaKnown RBP21.79■■□□□ 1.08
VARS-217ENST00000440048 BIRC5O15392 142 aa21.79■■□□□ 1.08
VARS-217ENST00000440048 P04436 131 aa21.79■■□□□ 1.08
VARS-217ENST00000440048 DHRS4L1P0CG22 281 aa21.79■■□□□ 1.08
VARS-217ENST00000440048 C1QL3Q5VWW1 255 aa21.79■■□□□ 1.08
VARS-217ENST00000440048 SLC22A10Q63ZE4 541 aa21.79■■□□□ 1.08
VARS-217ENST00000440048 TMEM64Q6YI46 380 aa21.79■■□□□ 1.08
VARS-217ENST00000440048 IKBIPQ70UQ0 350 aa21.79■■□□□ 1.08
VARS-217ENST00000440048 OR52R1Q8NGF1 315 aa21.79■■□□□ 1.08
VARS-217ENST00000440048 PPP1R14CQ8TAE6 165 aa21.79■■□□□ 1.08
VARS-217ENST00000440048 KAT2AQ92830 837 aa21.79■■□□□ 1.08
VARS-217ENST00000440048 EGLN2Q96KS0 407 aa21.79■■□□□ 1.08
VARS-217ENST00000440048 BBS4Q96RK4 519 aa21.79■■□□□ 1.08
VARS-217ENST00000440048 FAM173AQ9BQD7 235 aa21.79■■□□□ 1.08
VARS-217ENST00000440048 MIEF1Q9NQG6 463 aa21.79■■□□□ 1.08
VARS-217ENST00000440048 TAS2R7Q9NYW3 318 aa21.79■■□□□ 1.08
VARS-217ENST00000440048 CFL2Q9Y281 166 aa21.79■■□□□ 1.08
VARS-217ENST00000440048 NINQ8N4C6 2090 aa21.79■■□□□ 1.08
VARS-217ENST00000440048 EXPH5Q8NEV8 1989 aa21.79■■□□□ 1.08
VARS-217ENST00000440048 ZNF407Q9C0G0 2248 aa21.78■■□□□ 1.08
VARS-217ENST00000440048 WIPF3A6NGB9 483 aa21.78■■□□□ 1.08
VARS-217ENST00000440048 MYO1GB0I1T2 1018 aa21.78■■□□□ 1.08
VARS-217ENST00000440048 HS6ST1O60243 411 aa21.78■■□□□ 1.08
VARS-217ENST00000440048 ZWINTO95229 277 aa21.78■■□□□ 1.08
VARS-217ENST00000440048 RPL38P63173 70 aaKnown RBP21.78■■□□□ 1.08
VARS-217ENST00000440048 CHI3L2Q15782 390 aa21.78■■□□□ 1.08
VARS-217ENST00000440048 NTRK2Q16620 822 aa21.78■■□□□ 1.08
VARS-217ENST00000440048 RFTN2Q52LD8 501 aaPredicted RBP21.78■■□□□ 1.08
VARS-217ENST00000440048 GK5Q6ZS86 529 aa21.78■■□□□ 1.08
VARS-217ENST00000440048 FAM47EQ6ZV65 393 aa21.78■■□□□ 1.08
VARS-217ENST00000440048 GHDCQ8N2G8 530 aa21.78■■□□□ 1.08
VARS-217ENST00000440048 FAM13CQ8NE31 585 aa21.78■■□□□ 1.08
VARS-217ENST00000440048 C17orf47Q8NEP4 570 aa21.78■■□□□ 1.08
VARS-217ENST00000440048 OR10G3Q8NGC4 313 aa21.78■■□□□ 1.08
VARS-217ENST00000440048 PAQR8Q8TEZ7 354 aa21.78■■□□□ 1.08
VARS-217ENST00000440048 NXF5Q9H1B4 397 aaKnown RBP21.78■■□□□ 1.08
VARS-217ENST00000440048 ANKRA2Q9H9E1 313 aa21.78■■□□□ 1.08
VARS-217ENST00000440048 NPFFR2Q9Y5X5 522 aa21.78■■□□□ 1.08
VARS-217ENST00000440048 UNC79Q9P2D8 2635 aa21.77■■□□□ 1.08
VARS-217ENST00000440048 A0A1B0GUH1 482 aa21.77■■□□□ 1.08
VARS-217ENST00000440048 LYPLA1O75608 230 aaPredicted RBP21.77■■□□□ 1.08
VARS-217ENST00000440048 SERPINE1P05121 402 aa21.77■■□□□ 1.08
VARS-217ENST00000440048 MPIP34949 423 aa21.77■■□□□ 1.08
VARS-217ENST00000440048 PIGAP37287 484 aa21.77■■□□□ 1.08
VARS-217ENST00000440048 DNASE1L1P49184 302 aa21.77■■□□□ 1.08
VARS-217ENST00000440048 EMDP50402 254 aa21.77■■□□□ 1.08
VARS-217ENST00000440048 HSF1Q00613 529 aa21.77■■□□□ 1.08
VARS-217ENST00000440048 PLGLB1Q02325 96 aa21.77■■□□□ 1.08
VARS-217ENST00000440048 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.77■■□□□ 1.08
VARS-217ENST00000440048 GALNTL6Q49A17 601 aa21.77■■□□□ 1.08
VARS-217ENST00000440048 BNC2Q6ZN30 1099 aaPredicted RBP21.77■■□□□ 1.08
VARS-217ENST00000440048 FJX1Q86VR8 437 aa21.77■■□□□ 1.08
VARS-217ENST00000440048 FAM9CQ8IZT9 166 aa21.77■■□□□ 1.08
VARS-217ENST00000440048 OR5M3Q8NGP4 307 aa21.77■■□□□ 1.08
VARS-217ENST00000440048 RELTQ969Z4 430 aa21.77■■□□□ 1.08
VARS-217ENST00000440048 ERP27Q96DN0 273 aa21.77■■□□□ 1.08
VARS-217ENST00000440048 CCT7Q99832 543 aa21.77■■□□□ 1.08
VARS-217ENST00000440048 ITPAQ9BY32 194 aa21.77■■□□□ 1.08
VARS-217ENST00000440048 ZNF395Q9H8N7 513 aaPredicted RBP21.77■■□□□ 1.08
VARS-217ENST00000440048 PRODH2Q9UF12 536 aa21.77■■□□□ 1.08
VARS-217ENST00000440048 ZNF835Q9Y2P0 537 aa21.77■■□□□ 1.08
VARS-217ENST00000440048 TMED5Q9Y3A6 229 aa21.77■■□□□ 1.08
VARS-217ENST00000440048 CHCHD2Q9Y6H1 151 aaPredicted RBP21.77■■□□□ 1.08
VARS-217ENST00000440048 TRGV8A0A0C4DH27 118 aa21.76■■□□□ 1.07
VARS-217ENST00000440048 CAPN14A8MX76 684 aa21.76■■□□□ 1.07
VARS-217ENST00000440048 ITM2AO43736 263 aa21.76■■□□□ 1.07
VARS-217ENST00000440048 SLC19A2O60779 497 aa21.76■■□□□ 1.07
VARS-217ENST00000440048 HSPA4LO95757 839 aa21.76■■□□□ 1.07
VARS-217ENST00000440048 SDC1P18827 310 aa21.76■■□□□ 1.07
VARS-217ENST00000440048 NRG3P56975 720 aa21.76■■□□□ 1.07
VARS-217ENST00000440048 PPIAP62937 165 aaKnown RBP21.76■■□□□ 1.07
VARS-217ENST00000440048 FOXO1Q12778 655 aa21.76■■□□□ 1.07
VARS-217ENST00000440048 NNATQ16517 81 aa21.76■■□□□ 1.07
VARS-217ENST00000440048 CMPK2Q5EBM0 449 aa21.76■■□□□ 1.07
VARS-217ENST00000440048 XKR7Q5GH72 579 aa21.76■■□□□ 1.07
VARS-217ENST00000440048 CHERPQ8IWX8 916 aaKnown RBP21.76■■□□□ 1.07
VARS-217ENST00000440048 PRR22Q8IZ63 422 aa21.76■■□□□ 1.07
VARS-217ENST00000440048 FBXW8Q8N3Y1 598 aa21.76■■□□□ 1.07
VARS-217ENST00000440048 OR52N2Q8NGI0 321 aa21.76■■□□□ 1.07
VARS-217ENST00000440048 GFM2Q969S9 779 aaKnown RBP21.76■■□□□ 1.07
VARS-217ENST00000440048 MAGED4Q96JG8 741 aa21.76■■□□□ 1.07
VARS-217ENST00000440048 TTTY12Q9BZ98 90 aa21.76■■□□□ 1.07
VARS-217ENST00000440048 STMN4Q9H169 189 aaPredicted RBP21.76■■□□□ 1.07
VARS-217ENST00000440048 TUBA8Q9NY65 449 aaPredicted RBP21.76■■□□□ 1.07
VARS-217ENST00000440048 CNIH4Q9P003 139 aa21.76■■□□□ 1.07
VARS-217ENST00000440048 GIMAP2Q9UG22 337 aa21.76■■□□□ 1.07
VARS-217ENST00000440048 CNOT11Q9UKZ1 510 aaKnown RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms