RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 RPL3P39023 403 aaKnown RBP9.65□□□□□ -0.86
MCF2L-216ENST00000439475 ETV4P43268 484 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 PPICP45877 212 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 ASMTP46597 345 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 SERPINB4P48594 390 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 DNASE1L1P49184 302 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 KCNJ2P63252 427 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 PSPHP78330 225 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 MGAT2Q10469 447 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 SLC10A1Q14973 349 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 KIAA0040Q15053 153 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 RPS6KA2Q15349 733 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 CEBPEQ15744 281 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 TRMT12Q53H54 448 aaKnown RBP9.65□□□□□ -0.86
MCF2L-216ENST00000439475 ZNF628Q5EBL2 1059 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 ARHGAP11AQ6P4F7 1023 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 LYPD8Q6UX82 237 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 Q6ZPB1 254 aaPredicted RBP9.65□□□□□ -0.86
MCF2L-216ENST00000439475 ZCCHC23Q6ZST2 131 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 NUP54Q7Z3B4 507 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 R3HCC1LQ7Z5L2 792 aaKnown RBP9.65□□□□□ -0.86
MCF2L-216ENST00000439475 SIAH3Q8IW03 269 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 MMP21Q8N119 569 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 FBXW8Q8N3Y1 598 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 FAM109AQ8N4B1 249 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 ZNF441Q8N8Z8 693 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 OR52R1Q8NGF1 315 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 ZFP28Q8NHY6 868 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 DIO2Q92813 273 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 ADIPOR1Q96A54 375 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 TTTY12Q9BZ98 90 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 TAS2R9Q9NYW1 312 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 B4GALT7Q9UBV7 327 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 SH3BGRL2Q9UJC5 107 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 ZNF835Q9Y2P0 537 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 CCL27Q9Y4X3 112 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 DNAJC15Q9Y5T4 150 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 MYO7BQ6PIF6 2116 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 KALRNO60229 2985 aa9.65□□□□□ -0.87
MCF2L-216ENST00000439475 POLEQ07864 2286 aa9.65□□□□□ -0.87
MCF2L-216ENST00000439475 NINQ8N4C6 2090 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 ANKRD33BA6NCL7 494 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 MYO1GB0I1T2 1018 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 PLOD3O60568 738 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 SNX4O95219 450 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 SERPINE1P05121 402 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 CCL3P10147 92 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 PRPS2P11908 318 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 PCSK2P16519 638 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 GPX3P22352 226 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 GRK2P25098 689 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 PIGAP37287 484 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 RFC3P40938 356 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 NCBP2P52298 156 aaKnown RBP eCLIP9.64□□□□□ -0.87
MCF2L-216ENST00000439475 SMSP52788 366 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 RPL38P63173 70 aaKnown RBP9.64□□□□□ -0.87
MCF2L-216ENST00000439475 MRPS35P82673 323 aaKnown RBP9.64□□□□□ -0.87
MCF2L-216ENST00000439475 MAD2L1Q13257 205 aaPredicted RBP9.64□□□□□ -0.87
MCF2L-216ENST00000439475 EXOSC7Q15024 291 aaKnown RBP9.64□□□□□ -0.87
MCF2L-216ENST00000439475 HYAL4Q2M3T9 481 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 GALNTL6Q49A17 601 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 ATP6AP1LQ52LC2 224 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 RFTN2Q52LD8 501 aaPredicted RBP9.64□□□□□ -0.87
MCF2L-216ENST00000439475 TNFAIP8L3Q5GJ75 292 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 PRAMEF20Q5VT98 475 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 HHATQ5VTY9 493 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 FAM219BQ5XKK7 198 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 TMEM211Q6ICI0 200 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 FAM180BQ6P0A1 224 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 PACS2Q86VP3 889 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 NATD1Q8N6N6 113 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 OR10G3Q8NGC4 313 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 OR52N2Q8NGI0 321 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 OR5M3Q8NGP4 307 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 OR9A2Q8NGT5 310 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.64□□□□□ -0.87
MCF2L-216ENST00000439475 SPPL2AQ8TCT8 520 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 AGR3Q8TD06 166 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 KAT2AQ92830 837 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 TMCO6Q96DC7 493 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 MTERF3Q96E29 417 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 DTNBP1Q96EV8 351 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 JSRP1Q96MG2 331 aaPredicted RBP9.64□□□□□ -0.87
MCF2L-216ENST00000439475 PAIP2Q9BPZ3 127 aaKnown RBP9.64□□□□□ -0.87
MCF2L-216ENST00000439475 DOHHQ9BU89 302 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 ITPAQ9BY32 194 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 NXF5Q9H1B4 397 aaKnown RBP9.64□□□□□ -0.87
MCF2L-216ENST00000439475 DEFB127Q9H1M4 99 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 REEP4Q9H6H4 257 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 LDAHQ9H6V9 325 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 EXO5Q9H790 373 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 TNFRSF12AQ9NP84 129 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 ZFP64Q9NPA5 681 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 DEPPQ9NTK1 212 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 QPCTLQ9NXS2 382 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 SH3BP4Q9P0V3 963 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 PLEKHB1Q9UF11 243 aaPredicted RBP9.64□□□□□ -0.87
MCF2L-216ENST00000439475 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.64□□□□□ -0.87
MCF2L-216ENST00000439475 DOPEY2Q9Y3R5 2298 aa9.64□□□□□ -0.87
MCF2L-216ENST00000439475 HELZ2Q9BYK8 2649 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms