RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 NHSQ6T4R5 1651 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 A0A0X1KG70 313 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 C4orf47A7E2U8 309 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 G3V3Y1 287 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 ZNF432O94892 652 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 ST3GAL4Q11206 333 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 BNIP3Q12983 259 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 GAS6Q14393 721 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 CTC1Q2NKJ3 1217 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 CES4AQ5XG92 561 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 ZNF585AQ6P3V2 769 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 PAMR1Q6UXH9 720 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 ZNF551Q7Z340 670 aaPredicted RBP11.48□□□□□ -0.57
NEK1-201ENST00000439128 PLCZ1Q86YW0 608 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 MINDY1Q8N5J2 469 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 MCFD2Q8NI22 146 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 ZNF395Q9H8N7 513 aaPredicted RBP11.48□□□□□ -0.57
NEK1-201ENST00000439128 TRIM36Q9NQ86 728 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 TSC22D4Q9Y3Q8 395 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 NDUFV2P19404 249 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 GLP1RP43220 463 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 STARP49675 285 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 NR1H2P55055 460 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 MAD2L1BPQ15013 274 aaPredicted RBP11.48□□□□□ -0.57
NEK1-201ENST00000439128 ALG10BQ5I7T1 473 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 LRFN4Q6PJG9 635 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 CENPSQ8N2Z9 138 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 GALNT6Q8NCL4 622 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 TBC1D20Q96BZ9 403 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 TMED9Q9BVK6 235 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 STRA6Q9BX79 667 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 CXCL16Q9H2A7 254 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 WASH4PA8MWX3 477 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 SRPX2O60687 465 aaPredicted RBP11.48□□□□□ -0.57
NEK1-201ENST00000439128 CXCL10P02778 98 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 IL9P15248 144 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 MAGEA8P43361 318 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 DIO3P55073 304 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 C9orf135Q5VTT2 229 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 TIFABQ6ZNK6 161 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 ZNF227Q86WZ6 799 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 AURKBQ96GD4 344 aaPredicted RBP11.48□□□□□ -0.57
NEK1-201ENST00000439128 HS6ST2Q96MM7 605 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 SMIM14Q96QK8 99 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 SORBS1Q9BX66 1292 aaKnown RBP11.48□□□□□ -0.57
NEK1-201ENST00000439128 MROQ9BYG7 248 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 ING4Q9UNL4 249 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 NUAK1O60285 661 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 LCKP06239 509 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 MC3RP41968 323 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 SIRPAP78324 504 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 PERM1Q5SV97 790 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 PRAMEF20Q5VT98 475 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 SLCO6A1Q86UG4 719 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 DEFB124Q8NES8 71 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 THAP4Q8WY91 577 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 THOC3Q96J01 351 aaKnown RBP11.48□□□□□ -0.57
NEK1-201ENST00000439128 TAS2R7Q9NYW3 318 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 GPR160Q9UJ42 338 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 HS3ST2Q9Y278 367 aa11.48□□□□□ -0.57
NEK1-201ENST00000439128 METTL21EPA6NDL7 271 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 SRRM3A6NNA2 597 aaPredicted RBP11.47□□□□□ -0.57
NEK1-201ENST00000439128 H0YGG7 62 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 EIF3FO00303 357 aaPredicted RBP11.47□□□□□ -0.57
NEK1-201ENST00000439128 GRPRP30550 384 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 POU3F4P49335 361 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 ARF3P61204 181 aaPredicted RBP11.47□□□□□ -0.57
NEK1-201ENST00000439128 TAP2Q03519 686 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 OR7A5Q15622 319 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 FAM189A2Q15884 450 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 PPP1R3AQ16821 1122 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 WSCD2Q2TBF2 565 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 UNC50Q53HI1 259 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 ADIPOR2Q86V24 386 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 WASH6PQ9NQA3 447 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 ANKRD10Q9NXR5 420 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 C15orf41Q9Y2V0 281 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 PRSS21Q9Y6M0 314 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 RNF215Q9Y6U7 377 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 TMEM221A6NGB7 291 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 ANHXE9PGG2 379 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 M0R296 226 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 RGRP47804 291 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 PRLHRP49683 370 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 PLGLAQ15195 96 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 NDUFA5Q16718 116 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 ULK3Q6PHR2 472 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 B3GNT9Q6UX72 402 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 ACOT4Q8N9L9 421 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 OR52B6Q8NGF0 335 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 OR1J4Q8NGS1 313 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 TNFAIP8L1Q8WVP5 186 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 NEIL2Q969S2 332 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 MS4A4EQ96PG1 132 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 ADOQ96SZ5 270 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 ENKD1Q9H0I2 346 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 PTGDR2Q9Y5Y4 395 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 NARSO43776 548 aaKnown RBP11.47□□□□□ -0.57
NEK1-201ENST00000439128 PRLP01236 227 aa11.47□□□□□ -0.57
NEK1-201ENST00000439128 GLULP15104 373 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms