RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 GPX3P22352 226 aa14.96□□□□□ -0.01
SNRPB-202ENST00000438552 GPC1P35052 558 aa14.96□□□□□ -0.01
SNRPB-202ENST00000438552 SSR4P51571 173 aa14.96□□□□□ -0.01
SNRPB-202ENST00000438552 MANFP55145 182 aaKnown RBP14.96□□□□□ -0.01
SNRPB-202ENST00000438552 UFM1P61960 85 aa14.96□□□□□ -0.01
SNRPB-202ENST00000438552 OC90Q02509 493 aaPredicted RBP14.96□□□□□ -0.01
SNRPB-202ENST00000438552 NNATQ16517 81 aa14.96□□□□□ -0.01
SNRPB-202ENST00000438552 CGB2Q6NT52 195 aa14.96□□□□□ -0.01
SNRPB-202ENST00000438552 Q6ZS92 163 aa14.96□□□□□ -0.01
SNRPB-202ENST00000438552 CAMKMTQ7Z624 323 aa14.96□□□□□ -0.01
SNRPB-202ENST00000438552 ZNF843Q8N446 348 aa14.96□□□□□ -0.01
SNRPB-202ENST00000438552 ZNF441Q8N8Z8 693 aa14.96□□□□□ -0.01
SNRPB-202ENST00000438552 OR5L2Q8NGL0 311 aa14.96□□□□□ -0.01
SNRPB-202ENST00000438552 NUBPLQ8TB37 319 aa14.96□□□□□ -0.01
SNRPB-202ENST00000438552 HAS2Q92819 552 aa14.96□□□□□ -0.01
SNRPB-202ENST00000438552 COQ8BQ96D53 544 aa14.96□□□□□ -0.01
SNRPB-202ENST00000438552 MAGED4Q96JG8 741 aa14.96□□□□□ -0.01
SNRPB-202ENST00000438552 SIGLEC12Q96PQ1 595 aa14.96□□□□□ -0.01
SNRPB-202ENST00000438552 RASL10BQ96S79 203 aa14.96□□□□□ -0.01
SNRPB-202ENST00000438552 PRPF18Q99633 342 aaKnown RBP14.96□□□□□ -0.01
SNRPB-202ENST00000438552 UTP23Q9BRU9 249 aaKnown RBP14.96□□□□□ -0.01
SNRPB-202ENST00000438552 DUSP26Q9BV47 211 aa14.96□□□□□ -0.01
SNRPB-202ENST00000438552 ITPAQ9BY32 194 aa14.96□□□□□ -0.01
SNRPB-202ENST00000438552 BHLHE41Q9C0J9 482 aaPredicted RBP14.96□□□□□ -0.01
SNRPB-202ENST00000438552 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.96□□□□□ -0.01
SNRPB-202ENST00000438552 ACSS1Q9NUB1 689 aaPredicted RBP14.96□□□□□ -0.01
SNRPB-202ENST00000438552 DDX18Q9NVP1 670 aaKnown RBP14.96□□□□□ -0.01
SNRPB-202ENST00000438552 B3GNT3Q9Y2A9 372 aa14.96□□□□□ -0.01
SNRPB-202ENST00000438552 YARS2Q9Y2Z4 477 aaKnown RBP14.96□□□□□ -0.01
SNRPB-202ENST00000438552 SPTA1P02549 2419 aa14.95□□□□□ -0.02
SNRPB-202ENST00000438552 C2orf92A0A1B0GVN3 265 aa14.95□□□□□ -0.02
SNRPB-202ENST00000438552 A0A1W2PRB8 838 aa14.95□□□□□ -0.02
SNRPB-202ENST00000438552 PLOD3O60568 738 aa14.95□□□□□ -0.02
SNRPB-202ENST00000438552 NADKO95544 446 aaPredicted RBP14.95□□□□□ -0.02
SNRPB-202ENST00000438552 IL12AP29459 219 aa14.95□□□□□ -0.02
SNRPB-202ENST00000438552 CD96P40200 585 aa14.95□□□□□ -0.02
SNRPB-202ENST00000438552 CASRP41180 1078 aa14.95□□□□□ -0.02
SNRPB-202ENST00000438552 SOX3P41225 446 aa14.95□□□□□ -0.02
SNRPB-202ENST00000438552 EMDP50402 254 aa14.95□□□□□ -0.02
SNRPB-202ENST00000438552 TNFSF10P50591 281 aa14.95□□□□□ -0.02
SNRPB-202ENST00000438552 CLNS1AP54105 237 aaKnown RBP14.95□□□□□ -0.02
SNRPB-202ENST00000438552 SF3A3Q12874 501 aaKnown RBP eCLIP14.95□□□□□ -0.026e-7■■■□□ 19.2
SNRPB-202ENST00000438552 ZNF155Q12901 538 aaPredicted RBP14.95□□□□□ -0.02
SNRPB-202ENST00000438552 OR1C1Q15619 314 aa14.95□□□□□ -0.02
SNRPB-202ENST00000438552 PDCD4Q53EL6 469 aaKnown RBP14.95□□□□□ -0.02
SNRPB-202ENST00000438552 SPANXN4Q5MJ08 99 aa14.95□□□□□ -0.02
SNRPB-202ENST00000438552 HLA-DQA1Q5Y7H0 255 aa14.95□□□□□ -0.02
SNRPB-202ENST00000438552 OR4F3Q6IEY1 312 aa14.95□□□□□ -0.02
SNRPB-202ENST00000438552 Q8NA96 180 aa14.95□□□□□ -0.02
SNRPB-202ENST00000438552 ASB15Q8WXK1 588 aa14.95□□□□□ -0.02
SNRPB-202ENST00000438552 PNPLA2Q96AD5 504 aa14.95□□□□□ -0.02
SNRPB-202ENST00000438552 TESCQ96BS2 214 aa14.95□□□□□ -0.02
SNRPB-202ENST00000438552 ERP27Q96DN0 273 aa14.95□□□□□ -0.02
SNRPB-202ENST00000438552 ELP4Q96EB1 424 aa14.95□□□□□ -0.02
SNRPB-202ENST00000438552 CCDC28BQ9BUN5 200 aa14.95□□□□□ -0.02
SNRPB-202ENST00000438552 CLMPQ9H6B4 373 aa14.95□□□□□ -0.02
SNRPB-202ENST00000438552 MAPRE3Q9UPY8 281 aa14.95□□□□□ -0.02
SNRPB-202ENST00000438552 HEMK1Q9Y5R4 338 aaPredicted RBP14.95□□□□□ -0.02
SNRPB-202ENST00000438552 CNTRLQ7Z7A1 2325 aa14.95□□□□□ -0.02
SNRPB-202ENST00000438552 A0A087WV62 115 aa14.94□□□□□ -0.02
SNRPB-202ENST00000438552 A0A0G2JND7 137 aa14.94□□□□□ -0.02
SNRPB-202ENST00000438552 UPK1AO00322 258 aa14.94□□□□□ -0.02
SNRPB-202ENST00000438552 PLOD2O00469 737 aa14.94□□□□□ -0.02
SNRPB-202ENST00000438552 SLITRK5O94991 958 aa14.94□□□□□ -0.02
SNRPB-202ENST00000438552 OR6B1O95007 311 aa14.94□□□□□ -0.02
SNRPB-202ENST00000438552 C6orf47O95873 294 aa14.94□□□□□ -0.02
SNRPB-202ENST00000438552 TROVE2P10155 538 aaKnown RBP eCLIP14.94□□□□□ -0.021e-323■□□□□ 9.3
SNRPB-202ENST00000438552 TRHRP34981 398 aaPredicted RBP14.94□□□□□ -0.02
SNRPB-202ENST00000438552 KIR3DL1P43629 444 aa14.94□□□□□ -0.02
SNRPB-202ENST00000438552 HLCSP50747 726 aa14.94□□□□□ -0.02
SNRPB-202ENST00000438552 NR0B1P51843 470 aaKnown RBP14.94□□□□□ -0.02
SNRPB-202ENST00000438552 GYS2P54840 703 aa14.94□□□□□ -0.02
SNRPB-202ENST00000438552 ZNF169Q14929 603 aaPredicted RBP14.94□□□□□ -0.02
SNRPB-202ENST00000438552 RPS6KA2Q15349 733 aa14.94□□□□□ -0.02
SNRPB-202ENST00000438552 GSTA3Q16772 222 aa14.94□□□□□ -0.02
SNRPB-202ENST00000438552 FAM174BQ3ZCQ3 159 aa14.94□□□□□ -0.02
SNRPB-202ENST00000438552 PLEKHN1Q494U1 663 aaPredicted RBP14.94□□□□□ -0.02
SNRPB-202ENST00000438552 SZRD1Q7Z422 152 aa14.94□□□□□ -0.02
SNRPB-202ENST00000438552 CLECL1Q8IZS7 167 aa14.94□□□□□ -0.02
SNRPB-202ENST00000438552 CYP4Z2PQ8N1L4 340 aa14.94□□□□□ -0.02
SNRPB-202ENST00000438552 OR2L13Q8N349 312 aa14.94□□□□□ -0.02
SNRPB-202ENST00000438552 TMEM156Q8N614 296 aa14.94□□□□□ -0.02
SNRPB-202ENST00000438552 MDS2Q8NDY4 140 aa14.94□□□□□ -0.02
SNRPB-202ENST00000438552 ADIPOR1Q96A54 375 aa14.94□□□□□ -0.02
SNRPB-202ENST00000438552 HES7Q9BYE0 225 aa14.94□□□□□ -0.02
SNRPB-202ENST00000438552 NXF5Q9H1B4 397 aaKnown RBP14.94□□□□□ -0.02
SNRPB-202ENST00000438552 FOLH1BQ9HBA9 442 aa14.94□□□□□ -0.02
SNRPB-202ENST00000438552 SIRT3Q9NTG7 399 aaPredicted RBP14.94□□□□□ -0.02
SNRPB-202ENST00000438552 LRFN1Q9P244 771 aa14.94□□□□□ -0.02
SNRPB-202ENST00000438552 C19orf53Q9UNZ5 99 aaPredicted RBP14.94□□□□□ -0.02
SNRPB-202ENST00000438552 TRAV17A0A0B4J275 112 aa14.93□□□□□ -0.02
SNRPB-202ENST00000438552 A8MVJ9 347 aa14.93□□□□□ -0.02
SNRPB-202ENST00000438552 COQ9O75208 318 aa14.93□□□□□ -0.02
SNRPB-202ENST00000438552 BCAS2O75934 225 aaPredicted RBP14.93□□□□□ -0.02
SNRPB-202ENST00000438552 NEURL1O76050 574 aa14.93□□□□□ -0.02
SNRPB-202ENST00000438552 SORBS2O94875 1100 aaKnown RBP14.93□□□□□ -0.02
SNRPB-202ENST00000438552 PSMG1O95456 288 aa14.93□□□□□ -0.02
SNRPB-202ENST00000438552 ABCB1P08183 1280 aaPredicted RBP14.93□□□□□ -0.02
SNRPB-202ENST00000438552 CYB561P49447 251 aa14.93□□□□□ -0.02
SNRPB-202ENST00000438552 DGKQP52824 942 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms