RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 K7EIL1 84 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 OR1F1O43749 312 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 ULK1O75385 1050 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 PSIP1O75475 530 aaKnown RBP9.74□□□□□ -0.85
RTN4-211ENST00000438462 CBR3O75828 277 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 SYF2O95926 243 aaKnown RBP9.74□□□□□ -0.85
RTN4-211ENST00000438462 FSHBP01225 129 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 OPN1MWP04001 364 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 OPN1MW2P0DN77 364 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 OPN1MW3P0DN78 364 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 CDH1P12830 882 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 DAOP14920 347 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 SLC6A8P48029 635 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 RPP38P78345 283 aaKnown RBP9.74□□□□□ -0.85
RTN4-211ENST00000438462 RPS6KA1Q15418 735 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 SLC9A3R2Q15599 337 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 SWI5Q1ZZU3 235 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 DMRTC1Q5HYR2 192 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 SLC29A4Q7RTT9 530 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 SLC46A3Q7Z3Q1 461 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 TAGAPQ8N103 731 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 OR2W6PQ8NHA6 318 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 CLDND2Q8NHS1 167 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 SENP5Q96HI0 755 aaPredicted RBP9.74□□□□□ -0.85
RTN4-211ENST00000438462 SERINC2Q96SA4 455 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 OSBPL11Q9BXB4 747 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 STMN4Q9H169 189 aaPredicted RBP9.74□□□□□ -0.85
RTN4-211ENST00000438462 KLHL31Q9H511 634 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 TCF7L1Q9HCS4 588 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 CCDC177Q9NQR7 707 aaPredicted RBP9.74□□□□□ -0.85
RTN4-211ENST00000438462 RWDD2AQ9UIY3 292 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 MGAT4BQ9UQ53 548 aa9.74□□□□□ -0.85
RTN4-211ENST00000438462 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.74□□□□□ -0.85
RTN4-211ENST00000438462 CLDN34H7C241 214 aa9.73□□□□□ -0.85
RTN4-211ENST00000438462 NTN1O95631 604 aa9.73□□□□□ -0.85
RTN4-211ENST00000438462 FTLP02792 175 aaPredicted RBP9.73□□□□□ -0.85
RTN4-211ENST00000438462 CATP04040 527 aaKnown RBP9.73□□□□□ -0.85
RTN4-211ENST00000438462 RHOXF2BP0C7M4 288 aa9.73□□□□□ -0.85
RTN4-211ENST00000438462 SMIM10L1P0DMW3 83 aa9.73□□□□□ -0.85
RTN4-211ENST00000438462 IFNGR1P15260 489 aa9.73□□□□□ -0.85
RTN4-211ENST00000438462 DDX5P17844 614 aaKnown RBP9.73□□□□□ -0.85
RTN4-211ENST00000438462 SRD5A2P31213 254 aa9.73□□□□□ -0.85
RTN4-211ENST00000438462 EEFSECP57772 596 aaKnown RBP9.73□□□□□ -0.85
RTN4-211ENST00000438462 SNRPD2P62316 118 aaKnown RBP9.73□□□□□ -0.85
RTN4-211ENST00000438462 ID2Q02363 134 aa9.73□□□□□ -0.85
RTN4-211ENST00000438462 RIN1Q13671 783 aa9.73□□□□□ -0.85
RTN4-211ENST00000438462 SEMA3AQ14563 771 aa9.73□□□□□ -0.85
RTN4-211ENST00000438462 MST1LQ2TV78 715 aa9.73□□□□□ -0.85
RTN4-211ENST00000438462 HSP90AA4PQ58FG1 418 aa9.73□□□□□ -0.85
RTN4-211ENST00000438462 DEPDC1Q5TB30 811 aa9.73□□□□□ -0.85
RTN4-211ENST00000438462 SAXO2Q658L1 398 aa9.73□□□□□ -0.85
RTN4-211ENST00000438462 PTRHD1Q6GMV3 140 aaKnown RBP9.73□□□□□ -0.85
RTN4-211ENST00000438462 ALKBH5Q6P6C2 394 aaKnown RBP9.73□□□□□ -0.85
RTN4-211ENST00000438462 TMEM108Q6UXF1 575 aa9.73□□□□□ -0.85
RTN4-211ENST00000438462 SLCO4C1Q6ZQN7 724 aa9.73□□□□□ -0.85
RTN4-211ENST00000438462 BHLHA15Q7RTS1 189 aaPredicted RBP9.73□□□□□ -0.85
RTN4-211ENST00000438462 R3HCC1LQ7Z5L2 792 aaKnown RBP9.73□□□□□ -0.85
RTN4-211ENST00000438462 NOA1Q8NC60 698 aaKnown RBP9.73□□□□□ -0.85
RTN4-211ENST00000438462 STYXQ8WUJ0 223 aa9.73□□□□□ -0.85
RTN4-211ENST00000438462 TFB1MQ8WVM0 346 aaKnown RBP9.73□□□□□ -0.85
RTN4-211ENST00000438462 SMIM10Q96HG1 83 aa9.73□□□□□ -0.85
RTN4-211ENST00000438462 ZNF48Q96MX3 618 aaPredicted RBP9.73□□□□□ -0.85
RTN4-211ENST00000438462 PANX3Q96QZ0 392 aa9.73□□□□□ -0.85
RTN4-211ENST00000438462 TTC1Q99614 292 aa9.73□□□□□ -0.85
RTN4-211ENST00000438462 OCSTAMPQ9BR26 566 aa9.73□□□□□ -0.85
RTN4-211ENST00000438462 TESQ9UGI8 421 aaKnown RBP9.73□□□□□ -0.85
RTN4-211ENST00000438462 ANAPC7Q9UJX3 599 aa9.73□□□□□ -0.85
RTN4-211ENST00000438462 DKKL1Q9UK85 242 aa9.73□□□□□ -0.85
RTN4-211ENST00000438462 EXO1Q9UQ84 846 aaKnown RBP9.73□□□□□ -0.85
RTN4-211ENST00000438462 PCDHB14Q9Y5E9 798 aa9.73□□□□□ -0.85
RTN4-211ENST00000438462 ATP23Q9Y6H3 246 aa9.73□□□□□ -0.85
RTN4-211ENST00000438462 A0A0G2JN53 185 aa9.72□□□□□ -0.85
RTN4-211ENST00000438462 CLPSL1A2RUU4 121 aa9.72□□□□□ -0.85
RTN4-211ENST00000438462 CTAGE15A4D2H0 777 aa9.72□□□□□ -0.85
RTN4-211ENST00000438462 PIP5K1CO60331 668 aa9.72□□□□□ -0.85
RTN4-211ENST00000438462 LDB3O75112 727 aa9.72□□□□□ -0.85
RTN4-211ENST00000438462 CDH16O75309 829 aa9.72□□□□□ -0.85
RTN4-211ENST00000438462 ANXA9O76027 345 aa9.72□□□□□ -0.85
RTN4-211ENST00000438462 FERP16591 822 aa9.72□□□□□ -0.85
RTN4-211ENST00000438462 IMPA1P29218 277 aa9.72□□□□□ -0.85
RTN4-211ENST00000438462 APOBEC3AP31941 199 aaPredicted RBP9.72□□□□□ -0.85
RTN4-211ENST00000438462 PTGDSP41222 190 aa9.72□□□□□ -0.85
RTN4-211ENST00000438462 TMED10P49755 219 aaKnown RBP9.72□□□□□ -0.85
RTN4-211ENST00000438462 DYNLT1P63172 113 aa9.72□□□□□ -0.85
RTN4-211ENST00000438462 BTN3A2P78410 334 aa9.72□□□□□ -0.85
RTN4-211ENST00000438462 SETDB1Q15047 1291 aa9.72□□□□□ -0.85
RTN4-211ENST00000438462 ACAP2Q15057 778 aa9.72□□□□□ -0.85
RTN4-211ENST00000438462 EBPQ15125 230 aaKnown RBP9.72□□□□□ -0.85
RTN4-211ENST00000438462 ZNF628Q5EBL2 1059 aa9.72□□□□□ -0.85
RTN4-211ENST00000438462 TCHHL1Q5QJ38 904 aaPredicted RBP9.72□□□□□ -0.85
RTN4-211ENST00000438462 ZNF362Q5T0B9 420 aaPredicted RBP9.72□□□□□ -0.85
RTN4-211ENST00000438462 ZNF549Q6P9A3 640 aa9.72□□□□□ -0.85
RTN4-211ENST00000438462 CTAGE6Q86UF2 777 aa9.72□□□□□ -0.85
RTN4-211ENST00000438462 C17orf64Q86WR6 236 aa9.72□□□□□ -0.85
RTN4-211ENST00000438462 WDSUB1Q8N9V3 476 aa9.72□□□□□ -0.85
RTN4-211ENST00000438462 ATG4AQ8WYN0 398 aa9.72□□□□□ -0.85
RTN4-211ENST00000438462 FAR2Q96K12 515 aa9.72□□□□□ -0.85
RTN4-211ENST00000438462 SYT11Q9BT88 431 aa9.72□□□□□ -0.85
RTN4-211ENST00000438462 PRRG4Q9BZD6 226 aa9.72□□□□□ -0.85
RTN4-211ENST00000438462 GBA3Q9H227 469 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms