RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 SLC25A16P16260 332 aa11.02□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 PPP3CBP16298 524 aa11.02□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 TCEA1P23193 301 aaKnown RBP11.02□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 GCKP35557 465 aa11.02□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 STT3AP46977 705 aa11.02□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 HERVK_113P63132 956 aa11.02□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 ERVK-8P63133 956 aa11.02□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 ACTG1P63261 375 aa11.02□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 CR1LQ2VPA4 569 aa11.02□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 DUPD1Q68J44 220 aa11.02□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 SCIMPQ6UWF3 145 aa11.02□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 TMPRSS11BQ86T26 416 aa11.02□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 CCT6BQ92526 530 aa11.02□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 DGAT2Q96PD7 388 aa11.02□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 SERINC2Q96SA4 455 aa11.02□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 MAPKAP1Q9BPZ7 522 aa11.02□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 AIF1LQ9BQI0 150 aa11.02□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 ERVK-6Q9BXR3 956 aa11.02□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 OR2B2Q9GZK3 357 aa11.02□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 ACTR6Q9GZN1 396 aa11.02□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 FBXO6Q9NRD1 293 aaPredicted RBP11.02□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 ERVK-19Q9WJR5 959 aa11.02□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 CADP27708 2225 aa11.02□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 CMYA5Q8N3K9 4069 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 H0YC42 278 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 CDC7O00311 574 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 PFDN6O15212 129 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 APRTP07741 180 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 CCDC166P0CW27 439 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 COX7A2P14406 83 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 OGNP20774 298 aaKnown RBP11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 USF1P22415 310 aaPredicted RBP11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 CTNNA1P35221 906 aaKnown RBP11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 GZMKP49863 264 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 TPD52P55327 224 aaPredicted RBP11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 CLDN15P56746 228 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 SLC37A1P57057 533 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 LAPTM4AQ15012 233 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 NRF1Q16656 503 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 NCMAPQ5T1S8 102 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 ADNP2Q6IQ32 1131 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 SLC29A4Q7RTT9 530 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 IFNEQ86WN2 208 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 DENND6AQ8IWF6 608 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 TAGAPQ8N103 731 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 BANPQ8N9N5 519 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 SEMA6DQ8NFY4 1073 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 SLC35B2Q8TB61 432 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 KCNJ9Q92806 393 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 FBXL20Q96IG2 436 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 PELI2Q9HAT8 420 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 GALNT9Q9HCQ5 603 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 ARMCX1Q9P291 453 aa11.01□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 IQANK1A0A1B0GTG1 560 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 TCRBV7S2A1N4TA0A589 114 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 TMEM89A2RUT3 159 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 BTNL10A8MVZ5 291 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 TMPRSS2O15393 492 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 ZNF189O75820 626 aaPredicted RBP11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 C8GP07360 202 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 CD3EP07766 207 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 MGAT1P26572 445 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 FDFT1P37268 417 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 PTGDSP41222 190 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 HADHBP55084 474 aaKnown RBP11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 DSCR9P59020 149 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 IGLV3-21P80748 117 aaPredicted RBP11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 TIAL1Q01085 375 aaKnown RBP eCLIP11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 PCDH1Q08174 1060 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 ZNF267Q14586 743 aaPredicted RBP11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 GUSBP1Q15486 140 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 CTU2Q2VPK5 515 aaKnown RBP11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 RNF111Q6ZNA4 994 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 VN1R5Q7Z5H4 357 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 DTX2Q86UW9 622 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 GPSM1Q86YR5 675 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 UBQLNLQ8IYU4 475 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 WDSUB1Q8N9V3 476 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 RNF214Q8ND24 703 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 OR2L5Q8NG80 312 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 C10orf105Q8TEF2 133 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 FAM168AQ92567 244 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 ALG3Q92685 438 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 TP53INP1Q96A56 240 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 KIFC1Q9BW19 673 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 NHEJ1Q9H9Q4 299 aaPredicted RBP11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 RNF122Q9H9V4 155 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 PRDM7Q9NQW5 492 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 SYBUQ9NX95 663 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 ARL15Q9NXU5 204 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 TAS2R10Q9NYW0 307 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 MOCS1Q9NZB8 636 aa11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 TMA7Q9Y2S6 64 aaKnown RBP11□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 CTAGE9A4FU28 777 aa10.99□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 GOLGA6L19H0YKK7 550 aa10.99□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 RAMP1O60894 148 aa10.99□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 ICOSLGO75144 302 aa10.99□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 GUCA1CO95843 209 aa10.99□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 TGFAP01135 160 aa10.99□□□□□ -0.65
SMAD9-IT1-201ENST00000437983 TPM4P67936 248 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms