RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 TMEM156Q8N614 296 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 DBF4BQ8NFT6 615 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 DNAJB14Q8TBM8 379 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 ST8SIA1Q92185 356 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 PDGFDQ9GZP0 370 aaPredicted RBP3.58□□□□□ -1.84
SHPRH-205ENST00000433355 IRF2BPLQ9H1B7 796 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 OPA3Q9H6K4 179 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 CYP4F12Q9HCS2 524 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 SLC17A6Q9P2U8 582 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 NEU3Q9UQ49 428 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 RNF215Q9Y6U7 377 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 ABCA7Q8IZY2 2146 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 WASHC1A8K0Z3 465 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 TFECO14948 347 aaPredicted RBP3.58□□□□□ -1.84
SHPRH-205ENST00000433355 GPR37L1O60883 481 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 TBPL1P62380 186 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 NAE1Q13564 534 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 Q6ZNX1 250 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 DET1Q7L5Y6 550 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 CALHM3Q86XJ0 350 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 ZNF683Q8IZ20 524 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 CAMKK1Q8N5S9 505 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 ACBD7Q8N6N7 88 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 MFSD9Q8NBP5 474 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 UTP15Q8TED0 518 aaKnown RBP3.58□□□□□ -1.84
SHPRH-205ENST00000433355 TMEM40Q8WWA1 233 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 HPS1Q92902 700 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 KIR3DX1Q9H7L2 352 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.58□□□□□ -1.84
SHPRH-205ENST00000433355 RBFOX1Q9NWB1 397 aaKnown RBP3.58□□□□□ -1.84
SHPRH-205ENST00000433355 UCKL1Q9NWZ5 548 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 B4GALT6Q9UBX8 382 aa3.58□□□□□ -1.84
SHPRH-205ENST00000433355 SLC35E2P0CK97 266 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 CALCBP10092 127 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 SOAT1P35610 550 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 RNF144AP50876 292 aaPredicted RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 SLBPQ14493 270 aaKnown RBP eCLIP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 COL19A1Q14993 1142 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 ZNF730Q6ZMV8 503 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 RPLP0P6Q8NHW5 317 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 COPS5Q92905 334 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 PTX4Q96A99 478 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 HYLS1Q96M11 299 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 TREX2Q9BQ50 279 aaPredicted RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 MROQ9BYG7 248 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 RNF39Q9H2S5 420 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 PAQR5Q9NXK6 330 aaPredicted RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 DAPK2Q9UIK4 370 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 LINC00032P0C843 101 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 TAS2R38P59533 333 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 OXA1LQ15070 435 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 STK11Q15831 433 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 NADK2Q4G0N4 442 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 LINGO2Q7L985 606 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 LMNTD1Q8N9Z9 388 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 OR4K14Q8NGD5 310 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 SCAMP5Q8TAC9 235 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 SEPHS2Q99611 448 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 RIMS4Q9H426 269 aaPredicted RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 KLHL31Q9H511 634 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 FAM118AQ9NWS6 357 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 FAM170AA1A519 330 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 NME4O00746 187 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 CASKO14936 926 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 NUDT21O43809 227 aaKnown RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 PEX11BO96011 259 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 TAS2R50P59544 299 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 PLCL1Q15111 1095 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 AGAP6Q5VW22 663 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 CREB3L2Q70SY1 520 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 MOB1BQ7L9L4 216 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 SHFQ7M4L6 423 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 AMIGO3Q86WK7 504 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 RASGRP3Q8IV61 690 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 DNAJC22Q8N4W6 341 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 SLC15A4Q8N697 577 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 OR7G3Q8NG95 312 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 FBXO30Q8TB52 745 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 AGAP4Q96P64 663 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 SECISBP2Q96T21 854 aaKnown RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 CST11Q9H112 138 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 DMRT3Q9NQL9 472 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 ATPIF1Q9UII2 106 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 TMEM98Q9Y2Y6 226 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 EFCAB9A8MZ26 197 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 ZNF670-ZNF695F2Z2N8 137 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 EIF4E2O60573 245 aaKnown RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 FGF18O76093 207 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 MT-ND1P03886 318 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 CHRNGP07510 517 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 TGM4P49221 684 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 SHC2P98077 582 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 PRDX1Q06830 199 aaKnown RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 AQP6Q13520 282 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 SLC9B1Q4ZJI4 515 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 NXNL2Q5VZ03 156 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 SLCO4C1Q6ZQN7 724 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 SMIM5Q71RC9 77 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 SLC5A8Q8N695 610 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 ERMAPQ96PL5 475 aaPredicted RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms