RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 KIAA0040Q15053 153 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 LTB4RQ15722 352 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 PDCD2Q16342 344 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 PRICKLE4Q2TBC4 344 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 C6orf163Q5TEZ5 329 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 RPUSD3Q6P087 351 aaKnown RBP5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 FAM180AQ6UWF9 173 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 SLC29A4Q7RTT9 530 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 HDXQ7Z353 690 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 ZNF227Q86WZ6 799 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 TICAM1Q8IUC6 712 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 SULF2Q8IWU5 870 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 C9orf40Q8IXQ3 194 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 PRR22Q8IZ63 422 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 CYP4Z2PQ8N1L4 340 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 CPSF7Q8N684 471 aaKnown RBP5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 HORMAD2Q8N7B1 307 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 ZNF781Q8N8C0 355 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 MDS2Q8NDY4 140 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 C7orf57Q8NEG2 295 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 OR6Y1Q8NGX8 325 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 FAR1Q8WVX9 515 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 TMEM125Q96AQ2 219 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 TUBGCP3Q96CW5 907 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 ART5Q96L15 291 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 ZNF681Q96N22 645 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 TSSK3Q96PN8 268 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 BBS4Q96RK4 519 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 RASL10BQ96S79 203 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 PELOQ9BRX2 385 aaKnown RBP5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 TRMOQ9BU70 441 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 C1orf50Q9BV19 199 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 RNF32Q9H0A6 362 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 STMN4Q9H169 189 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 MANSC1Q9H8J5 431 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 CXorf21Q9HAI6 301 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 NPHS2Q9NP85 383 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 MIEF1Q9NQG6 463 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 OLAHQ9NV23 265 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 ARGLU1Q9NWB6 273 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 SIRT5Q9NXA8 310 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 NKIRAS1Q9NYS0 192 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 SH3BP4Q9P0V3 963 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 EXO1Q9UQ84 846 aaKnown RBP5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 ACTL7BQ9Y614 415 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 GOLGA8QA0A0J9YX86 632 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 PINLYPA6NC86 204 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 GOLGA8OA6NCC3 632 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 ANKUB1A6NFN9 424 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 A8MVJ9 347 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 TMEM114B3SHH9 223 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 NPIPA5E9PKD4 350 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 GOLGA8NF8WBI6 632 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 KLRC4-KLRK1H3BQV0 150 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 LSM1O15116 133 aaKnown RBP5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 PEX1O43933 1283 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 NME2P1O60361 137 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 PDE9AO76083 593 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 UNC5CO95185 931 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 CRYABP02511 175 aaKnown RBP5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 IGKV3-11P04433 115 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 SERPINE1P05121 402 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 DHRS4L1P0CG22 281 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 SDC1P18827 310 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 DDCP20711 480 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 S1PR1P21453 382 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 NME2P22392 152 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 PRPH2P23942 346 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 GRK2P25098 689 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 MST1P26927 711 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 GALNSP34059 522 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 MPIP34949 423 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 TRHRP34981 398 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 SERPINB5P36952 375 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 PIGAP37287 484 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 DNASE1L1P49184 302 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 MEOX1P50221 254 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 NCBP2P52298 156 aaKnown RBP eCLIP5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 ALDH6A1Q02252 535 aaKnown RBP5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 ZNF763Q0D2J5 394 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 FUT7Q11130 342 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 MAP4K2Q12851 820 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 DUSP8Q13202 625 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 NNATQ16517 81 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 SPRED3Q2MJR0 410 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 TTMPQ5BVD1 217 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 PIGGQ5H8A4 983 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 C6orf136Q5SQH8 315 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 AGBL2Q5U5Z8 902 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 IL23RQ5VWK5 629 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 FAM71E1Q6IPT2 247 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 GALNT18Q6P9A2 607 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 LYPD4Q6UWN0 246 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 LGI4Q8N135 537 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 LRRC25Q8N386 305 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 LIX1Q8N485 282 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 BCORP1Q8N888 145 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 TMEM178AQ8NBL3 297 aa5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 FAM98AQ8NCA5 519 aaKnown RBP5.33□□□□□ -1.56
HMGB3P24-201ENST00000433260 FAM13CQ8NE31 585 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms