RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 DUSP2Q05923 314 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 CRYZQ08257 329 aaKnown RBP15.64■□□□□ 0.09
TRIM39-209ENST00000428728 ACSF3Q4G176 576 aaPredicted RBP15.64■□□□□ 0.09
TRIM39-209ENST00000428728 TCHHL1Q5QJ38 904 aaPredicted RBP15.64■□□□□ 0.09
TRIM39-209ENST00000428728 SLC48A1Q6P1K1 146 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 SEM1Q6ZVN7 128 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 PACS2Q86VP3 889 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 C1orf52Q8N6N3 182 aaKnown RBP15.64■□□□□ 0.09
TRIM39-209ENST00000428728 ADCY4Q8NFM4 1077 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 OR7G1Q8NGA0 311 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 TRPC4APQ8TEL6 797 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 NRGNQ92686 78 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 GNRHR2Q96P88 292 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 ITPAQ9BY32 194 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 ANGPTL4Q9BY76 406 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 METTL7AQ9H8H3 244 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 MAT2BQ9NZL9 334 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 TRPS1Q9UHF7 1281 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 ZNF180Q9UJW8 692 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 SNX6Q9UNH7 406 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 C15orf41Q9Y2V0 281 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 SLC6A5Q9Y345 797 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 L3MBTL1Q9Y468 752 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 SNRPAP09012 282 aaKnown RBP15.63■□□□□ 0.09
TRIM39-209ENST00000428728 S1PR1P21453 382 aa15.63■□□□□ 0.09
TRIM39-209ENST00000428728 CASP3P42574 277 aa15.63■□□□□ 0.09
TRIM39-209ENST00000428728 CDK9P50750 372 aaKnown RBP15.63■□□□□ 0.09
TRIM39-209ENST00000428728 RPP38P78345 283 aaKnown RBP15.63■□□□□ 0.09
TRIM39-209ENST00000428728 TESK1Q15569 626 aa15.63■□□□□ 0.09
TRIM39-209ENST00000428728 LTB4RQ15722 352 aa15.63■□□□□ 0.09
TRIM39-209ENST00000428728 PRICKLE4Q2TBC4 344 aa15.63■□□□□ 0.09
TRIM39-209ENST00000428728 FNDC7Q5VTL7 733 aa15.63■□□□□ 0.09
TRIM39-209ENST00000428728 DESI1Q6ICB0 168 aa15.63■□□□□ 0.09
TRIM39-209ENST00000428728 ZZZ3Q8IYH5 903 aa15.63■□□□□ 0.09
TRIM39-209ENST00000428728 CDYL2Q8N8U2 506 aa15.63■□□□□ 0.09
TRIM39-209ENST00000428728 RELL2Q8NC24 303 aaPredicted RBP15.63■□□□□ 0.09
TRIM39-209ENST00000428728 NAXEQ8NCW5 288 aa15.63■□□□□ 0.09
TRIM39-209ENST00000428728 SIMC1Q8NDZ2 872 aa15.63■□□□□ 0.09
TRIM39-209ENST00000428728 MYRIPQ8NFW9 859 aa15.63■□□□□ 0.09
TRIM39-209ENST00000428728 TNIP2Q8NFZ5 429 aa15.63■□□□□ 0.09
TRIM39-209ENST00000428728 SECISBP2Q96T21 854 aaKnown RBP15.63■□□□□ 0.09
TRIM39-209ENST00000428728 BRF2Q9HAW0 419 aa15.63■□□□□ 0.09
TRIM39-209ENST00000428728 SLC24A3Q9HC58 644 aa15.63■□□□□ 0.09
TRIM39-209ENST00000428728 PFDN4Q9NQP4 134 aa15.63■□□□□ 0.09
TRIM39-209ENST00000428728 EHD3Q9NZN3 535 aa15.63■□□□□ 0.09
TRIM39-209ENST00000428728 ZNF225Q9UK10 706 aa15.63■□□□□ 0.09
TRIM39-209ENST00000428728 CES1P1Q9UKY3 287 aa15.63■□□□□ 0.09
TRIM39-209ENST00000428728 CAMK2AQ9UQM7 478 aa15.63■□□□□ 0.09
TRIM39-209ENST00000428728 PCDHGB3Q9Y5G1 929 aa15.63■□□□□ 0.09
TRIM39-209ENST00000428728 AKAP9Q99996 3911 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 HSPB2A8KAH6 182 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 PPM1BO75688 479 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 SNX4O95219 450 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 ESRRBO95718 433 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 ATP1B1P05026 303 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 CTAGE8P0CG41 777 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 CSNK2A2P19784 350 aaPredicted RBP15.62■□□□□ 0.09
TRIM39-209ENST00000428728 BMP5P22003 454 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 UQCRC1P31930 480 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 CLCQ05315 142 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 PLCXD2Q0VAA5 305 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 HSPB2Q16082 182 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 EIPR1Q53HC9 387 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 DCST1Q5T197 706 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 ARSKQ6UWY0 536 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 ANGPTL8Q6UXH0 198 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 CTAGE4Q8IX94 777 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 MNS1Q8NEH6 495 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 C17orf47Q8NEP4 570 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 TM4SF18Q96CE8 201 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 OMA1Q96E52 524 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 TIMP4Q99727 224 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 FAIM2Q9BWQ8 316 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 C1QTNF3Q9BXJ4 246 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 UBQLN3Q9H347 655 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 PLLPQ9Y342 182 aa15.62■□□□□ 0.09
TRIM39-209ENST00000428728 MPDZO75970 2070 aa15.61■□□□□ 0.09
TRIM39-209ENST00000428728 MED12LQ86YW9 2145 aa15.61■□□□□ 0.09
TRIM39-209ENST00000428728 MANBAO00462 879 aa15.61■□□□□ 0.09
TRIM39-209ENST00000428728 SUPT7LO94864 414 aa15.61■□□□□ 0.09
TRIM39-209ENST00000428728 CBX7O95931 251 aa15.61■□□□□ 0.09
TRIM39-209ENST00000428728 HPNP05981 417 aa15.61■□□□□ 0.09
TRIM39-209ENST00000428728 ABCB1P08183 1280 aaPredicted RBP15.61■□□□□ 0.09
TRIM39-209ENST00000428728 PCSK2P16519 638 aa15.61■□□□□ 0.09
TRIM39-209ENST00000428728 TAC1P20366 129 aa15.61■□□□□ 0.09
TRIM39-209ENST00000428728 HSD17B3P37058 310 aa15.61■□□□□ 0.09
TRIM39-209ENST00000428728 MRPS35P82673 323 aaKnown RBP15.61■□□□□ 0.09
TRIM39-209ENST00000428728 MGAT2Q10469 447 aa15.61■□□□□ 0.09
TRIM39-209ENST00000428728 MAP4K2Q12851 820 aa15.61■□□□□ 0.09
TRIM39-209ENST00000428728 WIPI1Q5MNZ9 446 aaPredicted RBP15.61■□□□□ 0.09
TRIM39-209ENST00000428728 LACC1Q8IV20 430 aa15.61■□□□□ 0.09
TRIM39-209ENST00000428728 TMEM151AQ8N4L1 468 aa15.61■□□□□ 0.09
TRIM39-209ENST00000428728 OR52R1Q8NGF1 315 aa15.61■□□□□ 0.09
TRIM39-209ENST00000428728 CNRIP1Q96F85 164 aaPredicted RBP15.61■□□□□ 0.09
TRIM39-209ENST00000428728 TMEM41AQ96HV5 264 aa15.61■□□□□ 0.09
TRIM39-209ENST00000428728 TMEM237Q96Q45 408 aa15.61■□□□□ 0.09
TRIM39-209ENST00000428728 OSBPL11Q9BXB4 747 aa15.61■□□□□ 0.09
TRIM39-209ENST00000428728 GALNT9Q9HCQ5 603 aa15.61■□□□□ 0.09
TRIM39-209ENST00000428728 NMRK1Q9NWW6 199 aa15.61■□□□□ 0.09
TRIM39-209ENST00000428728 KLRF1Q9NZS2 232 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms