RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 LSP1P33241 339 aa22.68■■□□□ 1.22
VEGFA-209ENST00000425836 MRPL19P49406 292 aaKnown RBP22.68■■□□□ 1.22
VEGFA-209ENST00000425836 EMDP50402 254 aa22.68■■□□□ 1.22
VEGFA-209ENST00000425836 DPY19L1Q2PZI1 675 aa22.68■■□□□ 1.22
VEGFA-209ENST00000425836 FAM174BQ3ZCQ3 159 aa22.68■■□□□ 1.22
VEGFA-209ENST00000425836 PAOXQ6QHF9 649 aa22.68■■□□□ 1.22
VEGFA-209ENST00000425836 OR2L13Q8N349 312 aa22.68■■□□□ 1.22
VEGFA-209ENST00000425836 ZADH2Q8N4Q0 377 aa22.68■■□□□ 1.22
VEGFA-209ENST00000425836 RBMXL3Q8N7X1 1067 aaKnown RBP22.68■■□□□ 1.22
VEGFA-209ENST00000425836 GLB1L3Q8NCI6 653 aaPredicted RBP22.68■■□□□ 1.22
VEGFA-209ENST00000425836 SLC39A7Q92504 469 aa22.68■■□□□ 1.22
VEGFA-209ENST00000425836 GAL3ST4Q96RP7 486 aa22.68■■□□□ 1.22
VEGFA-209ENST00000425836 ZBTB18Q99592 522 aa22.68■■□□□ 1.22
VEGFA-209ENST00000425836 RNF32Q9H0A6 362 aa22.68■■□□□ 1.22
VEGFA-209ENST00000425836 ABI3Q9P2A4 366 aa22.68■■□□□ 1.22
VEGFA-209ENST00000425836 RALYQ9UKM9 306 aaKnown RBP22.68■■□□□ 1.22
VEGFA-209ENST00000425836 C19orf53Q9UNZ5 99 aaPredicted RBP22.68■■□□□ 1.22
VEGFA-209ENST00000425836 DTX4Q9Y2E6 619 aa22.68■■□□□ 1.22
VEGFA-209ENST00000425836 YARS2Q9Y2Z4 477 aaKnown RBP22.68■■□□□ 1.22
VEGFA-209ENST00000425836 CSAG2Q9Y5P2 127 aa22.68■■□□□ 1.22
VEGFA-209ENST00000425836 C2orf92A0A1B0GVN3 265 aa22.67■■□□□ 1.22
VEGFA-209ENST00000425836 FCHO1O14526 889 aa22.67■■□□□ 1.22
VEGFA-209ENST00000425836 DPM1O60762 260 aa22.67■■□□□ 1.22
VEGFA-209ENST00000425836 SCN2BO60939 215 aa22.67■■□□□ 1.22
VEGFA-209ENST00000425836 OR2J2O76002 312 aa22.67■■□□□ 1.22
VEGFA-209ENST00000425836 C6orf47O95873 294 aa22.67■■□□□ 1.22
VEGFA-209ENST00000425836 DGKQP52824 942 aa22.67■■□□□ 1.22
VEGFA-209ENST00000425836 SEC24CP53992 1094 aa22.67■■□□□ 1.22
VEGFA-209ENST00000425836 ZNF468Q5VIY5 522 aaPredicted RBP22.67■■□□□ 1.22
VEGFA-209ENST00000425836 ZNF441Q8N8Z8 693 aa22.67■■□□□ 1.22
VEGFA-209ENST00000425836 ADIPOR1Q96A54 375 aa22.67■■□□□ 1.22
VEGFA-209ENST00000425836 MAGED4Q96JG8 741 aa22.67■■□□□ 1.22
VEGFA-209ENST00000425836 PRODH2Q9UF12 536 aa22.67■■□□□ 1.22
VEGFA-209ENST00000425836 CFL2Q9Y281 166 aa22.67■■□□□ 1.22
VEGFA-209ENST00000425836 COPG1Q9Y678 874 aaKnown RBP22.67■■□□□ 1.22
VEGFA-209ENST00000425836 DOCK10Q96BY6 2186 aa22.67■■□□□ 1.22
VEGFA-209ENST00000425836 DYTNA2CJ06 578 aa22.67■■□□□ 1.22
VEGFA-209ENST00000425836 NME6O75414 186 aaPredicted RBP22.67■■□□□ 1.22
VEGFA-209ENST00000425836 S100A3P33764 101 aa22.67■■□□□ 1.22
VEGFA-209ENST00000425836 ZFP36L2P47974 494 aaKnown RBP22.67■■□□□ 1.22
VEGFA-209ENST00000425836 ARFIP2P53365 341 aa22.67■■□□□ 1.22
VEGFA-209ENST00000425836 STX1BP61266 288 aa22.67■■□□□ 1.22
VEGFA-209ENST00000425836 GNGT1P63211 74 aa22.67■■□□□ 1.22
VEGFA-209ENST00000425836 ARG2P78540 354 aa22.67■■□□□ 1.22
VEGFA-209ENST00000425836 PIGGQ5H8A4 983 aa22.67■■□□□ 1.22
VEGFA-209ENST00000425836 CATSPER1Q8NEC5 780 aa22.67■■□□□ 1.22
VEGFA-209ENST00000425836 OR9I1Q8NGQ6 314 aa22.67■■□□□ 1.22
VEGFA-209ENST00000425836 RASL10BQ96S79 203 aa22.67■■□□□ 1.22
VEGFA-209ENST00000425836 SIRT3Q9NTG7 399 aaPredicted RBP22.67■■□□□ 1.22
VEGFA-209ENST00000425836 DDX18Q9NVP1 670 aaKnown RBP22.67■■□□□ 1.22
VEGFA-209ENST00000425836 KLHL14Q9P2G3 628 aa22.67■■□□□ 1.22
VEGFA-209ENST00000425836 HEMK1Q9Y5R4 338 aaPredicted RBP22.67■■□□□ 1.22
VEGFA-209ENST00000425836 RNASET2O00584 256 aaKnown RBP22.66■■□□□ 1.22
VEGFA-209ENST00000425836 ZNF354AO60765 605 aaPredicted RBP22.66■■□□□ 1.22
VEGFA-209ENST00000425836 TRHRP34981 398 aaPredicted RBP22.66■■□□□ 1.22
VEGFA-209ENST00000425836 CD96P40200 585 aa22.66■■□□□ 1.22
VEGFA-209ENST00000425836 TUBA3CQ13748 450 aa22.66■■□□□ 1.22
VEGFA-209ENST00000425836 SOWAHCQ53LP3 525 aaPredicted RBP22.66■■□□□ 1.22
VEGFA-209ENST00000425836 ANXA8L1Q5VT79 327 aa22.66■■□□□ 1.22
VEGFA-209ENST00000425836 HLA-DQA1Q5Y7H0 255 aa22.66■■□□□ 1.22
VEGFA-209ENST00000425836 TUBA3EQ6PEY2 450 aa22.66■■□□□ 1.22
VEGFA-209ENST00000425836 CLECL1Q8IZS7 167 aa22.66■■□□□ 1.22
VEGFA-209ENST00000425836 PSMA8Q8TAA3 256 aa22.66■■□□□ 1.22
VEGFA-209ENST00000425836 UTP23Q9BRU9 249 aaKnown RBP22.66■■□□□ 1.22
VEGFA-209ENST00000425836 ITPAQ9BY32 194 aa22.66■■□□□ 1.22
VEGFA-209ENST00000425836 MFRPQ9BY79 579 aa22.66■■□□□ 1.22
VEGFA-209ENST00000425836 ANKRD10Q9NXR5 420 aa22.66■■□□□ 1.22
VEGFA-209ENST00000425836 NTMQ9P121 344 aa22.66■■□□□ 1.22
VEGFA-209ENST00000425836 ERVK-11Q9UQG0 969 aa22.66■■□□□ 1.22
VEGFA-209ENST00000425836 PRSS51A0A1B0GVH4 220 aa22.65■■□□□ 1.22
VEGFA-209ENST00000425836 OR5H15A6NDH6 313 aa22.65■■□□□ 1.22
VEGFA-209ENST00000425836 PSMG1O95456 288 aa22.65■■□□□ 1.22
VEGFA-209ENST00000425836 PGRP06401 933 aa22.65■■□□□ 1.22
VEGFA-209ENST00000425836 NCF2P19878 526 aaPredicted RBP22.65■■□□□ 1.22
VEGFA-209ENST00000425836 ATP4BP51164 291 aa22.65■■□□□ 1.22
VEGFA-209ENST00000425836 SSR4P51571 173 aa22.65■■□□□ 1.22
VEGFA-209ENST00000425836 IRX1P78414 480 aaPredicted RBP22.65■■□□□ 1.22
VEGFA-209ENST00000425836 METTL21CQ5VZV1 264 aa22.65■■□□□ 1.22
VEGFA-209ENST00000425836 PTRH1Q86Y79 214 aaKnown RBP22.65■■□□□ 1.22
VEGFA-209ENST00000425836 TP53INP1Q96A56 240 aa22.65■■□□□ 1.22
VEGFA-209ENST00000425836 TAS2R9Q9NYW1 312 aa22.65■■□□□ 1.22
VEGFA-209ENST00000425836 TRIM33Q9UPN9 1127 aa22.65■■□□□ 1.22
VEGFA-209ENST00000425836 CDK2AP1O14519 115 aa22.64■■□□□ 1.22
VEGFA-209ENST00000425836 CFLARO15519 480 aa22.64■■□□□ 1.22
VEGFA-209ENST00000425836 COQ9O75208 318 aa22.64■■□□□ 1.22
VEGFA-209ENST00000425836 NADKO95544 446 aaPredicted RBP22.64■■□□□ 1.22
VEGFA-209ENST00000425836 NR0B1P51843 470 aaKnown RBP22.64■■□□□ 1.22
VEGFA-209ENST00000425836 HBA1P69905 142 aa22.64■■□□□ 1.22
VEGFA-209ENST00000425836 NADK2Q4G0N4 442 aa22.64■■□□□ 1.22
VEGFA-209ENST00000425836 Q6ZS92 163 aa22.64■■□□□ 1.22
VEGFA-209ENST00000425836 ANKRD46Q86W74 232 aa22.64■■□□□ 1.22
VEGFA-209ENST00000425836 C17orf47Q8NEP4 570 aa22.64■■□□□ 1.22
VEGFA-209ENST00000425836 VPS37AQ8NEZ2 397 aa22.64■■□□□ 1.22
VEGFA-209ENST00000425836 VSTM2LQ96N03 204 aa22.64■■□□□ 1.22
VEGFA-209ENST00000425836 ZNF385DQ9H6B1 395 aa22.64■■□□□ 1.22
VEGFA-209ENST00000425836 CXorf36Q9H7Y0 433 aa22.64■■□□□ 1.22
VEGFA-209ENST00000425836 TRIM45Q9H8W5 580 aaPredicted RBP22.64■■□□□ 1.22
VEGFA-209ENST00000425836 FAM120CQ9NX05 1096 aaKnown RBP22.64■■□□□ 1.22
VEGFA-209ENST00000425836 PIEZO2Q9H5I5 2752 aa22.64■■□□□ 1.21
VEGFA-209ENST00000425836 GMNCA6NCL1 334 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms