RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 BRINP2Q9C0B6 783 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 IQCGQ9H095 443 aaKnown RBP11.72□□□□□ -0.53
SGCE-203ENST00000425444 LIME1Q9H400 295 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 GSTO2Q9H4Y5 243 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 ANKZF1Q9H8Y5 726 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 CXorf21Q9HAI6 301 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 NPDC1Q9NQX5 325 aaPredicted RBP11.72□□□□□ -0.53
SGCE-203ENST00000425444 DEPPQ9NTK1 212 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 DNAJB12Q9NXW2 375 aaKnown RBP11.72□□□□□ -0.53
SGCE-203ENST00000425444 KCNN3Q9UGI6 736 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 ST6GALNAC2Q9UJ37 374 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 MID2Q9UJV3 735 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 PSME2Q9UL46 239 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 TIMM22Q9Y584 194 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 PCDHA9Q9Y5H5 950 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 A0A1B0GTH9 108 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 C2orf92A0A1B0GVN3 265 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 TLDC2A0PJX2 215 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 E9PLN8 166 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 G3V2L1 256 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 PLIN3O60664 434 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 PDE9AO76083 593 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 CT62P0C5K7 136 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 CHN1P15882 459 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 KRT4P19013 534 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 CNR1P21554 472 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 DNASE1P24855 282 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 SERPINB3P29508 390 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 CRHR1P34998 444 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 FEN1P39748 380 aaKnown RBP11.71□□□□□ -0.53
SGCE-203ENST00000425444 DNASE1L1P49184 302 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 NR0B1P51843 470 aaKnown RBP11.71□□□□□ -0.53
SGCE-203ENST00000425444 VSNL1P62760 191 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 PPIAP62937 165 aaKnown RBP11.71□□□□□ -0.53
SGCE-203ENST00000425444 TRA2BP62995 288 aaKnown RBP11.71□□□□□ -0.53
SGCE-203ENST00000425444 KCNJ2P63252 427 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 HMGCS1Q01581 520 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 BTKQ06187 659 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 IFFO1Q0D2I5 559 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 SPDYAQ5MJ70 313 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 PRAMEF20Q5VT98 475 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 SLC22A10Q63ZE4 541 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 PAOXQ6QHF9 649 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 SCIMPQ6UWF3 145 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 CD163Q86VB7 1156 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 DMRTC2Q8IXT2 367 aaPredicted RBP11.71□□□□□ -0.53
SGCE-203ENST00000425444 DND1Q8IYX4 353 aaKnown RBP11.71□□□□□ -0.53
SGCE-203ENST00000425444 VWA5B2Q8N398 1253 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 SLC15A4Q8N697 577 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 OR52N2Q8NGI0 321 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 TM4SF18Q96CE8 201 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 SPACA9Q96E40 222 aaPredicted RBP11.71□□□□□ -0.53
SGCE-203ENST00000425444 ARSGQ96EG1 525 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 VKORC1Q9BQB6 163 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 DEFB127Q9H1M4 99 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 OR10A5Q9H207 317 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 MCM8Q9UJA3 840 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 ZNF780BQ9Y6R6 833 aa11.71□□□□□ -0.53
SGCE-203ENST00000425444 CAPN14A8MX76 684 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 CLPSP04118 112 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 IL3P08700 152 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 CSNK2A2P19784 350 aaPredicted RBP11.7□□□□□ -0.54
SGCE-203ENST00000425444 TIA1P31483 386 aaKnown RBP eCLIP11.7□□□□□ -0.54
SGCE-203ENST00000425444 PIGAP37287 484 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 NAGLUP54802 743 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 NRG3P56975 720 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 NAA20P61599 178 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 ZNF791Q3KP31 576 aaPredicted RBP11.7□□□□□ -0.54
SGCE-203ENST00000425444 ARHGAP11AQ6P4F7 1023 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 RGS9BPQ6ZS82 235 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 FRMD7Q6ZUT3 714 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 FGD2Q7Z6J4 655 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 DOLPP1Q86YN1 238 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 FAM109AQ8N4B1 249 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 OR7G1Q8NGA0 311 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 OR5M3Q8NGP4 307 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 OR2W6PQ8NHA6 318 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 CDC26Q8NHZ8 85 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 RDH11Q8TC12 318 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 C18orf12Q96KH6 178 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 ALPK1Q96QP1 1244 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 DMRTA2Q96SC8 542 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 EBPLQ9BY08 206 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 C12orf65Q9H3J6 166 aaKnown RBP11.7□□□□□ -0.54
SGCE-203ENST00000425444 IL1RL2Q9HB29 575 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 BCAP29Q9UHQ4 241 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 UTS2RQ9UKP6 389 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 CES1P1Q9UKY3 287 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 BOKQ9UMX3 212 aaPredicted RBP11.7□□□□□ -0.54
SGCE-203ENST00000425444 CFL2Q9Y281 166 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 PLEKHA6Q9Y2H5 1048 aa11.7□□□□□ -0.54
SGCE-203ENST00000425444 NKX2-6A6NCS4 301 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 FAM90A27PA6NNH2 459 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 H3BQF6 201 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 LRATO95237 230 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 INHBBP09529 407 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 FBXO45P0C2W1 286 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 CPA3P15088 417 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 MAGEA5P43359 124 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 TMED10P49755 219 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms