RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 MARCH9Q86YJ5 346 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 ARMC8Q8IUR7 673 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 DENND6AQ8IWF6 608 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 CNTN4Q8IWV2 1026 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 KRT222Q8N1A0 295 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 ZBTB2Q8N680 514 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 FBXO36Q8NEA4 188 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 C7orf57Q8NEG2 295 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 ZCCHC10Q8TBK6 192 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 MAGEC3Q8TD91 643 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 NAT14Q8WUY8 206 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 LCN9Q8WX39 176 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 FGF11Q92914 225 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 ZUFSPQ96AP4 578 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 RAD51AP1Q96B01 352 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 CERS2Q96G23 380 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 CFAP36Q96G28 342 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 C9orf72Q96LT7 481 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 C7orf26Q96N11 449 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 FOPNLQ96NB1 174 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 TBC1D10AQ9BXI6 508 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 LHPPQ9H008 270 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 SRMSQ9H3Y6 488 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 CXorf56Q9H5V9 222 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 ACTR5Q9H9F9 607 aaPredicted RBP2.36□□□□□ -2.03
VPS13A-208ENST00000423463 RDH14Q9HBH5 336 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 FBXO8Q9NRD0 319 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 IARS2Q9NSE4 1012 aaKnown RBP2.36□□□□□ -2.03
VPS13A-208ENST00000423463 BEX4Q9NWD9 120 aaPredicted RBP2.36□□□□□ -2.03
VPS13A-208ENST00000423463 HRASLS2Q9NWW9 162 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 PPP1R14DQ9NXH3 145 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 OGFRQ9NZT2 677 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 SLC25A10Q9UBX3 287 aaPredicted RBP2.36□□□□□ -2.03
VPS13A-208ENST00000423463 CORO1CQ9ULV4 474 aaPredicted RBP2.36□□□□□ -2.03
VPS13A-208ENST00000423463 CHMP2BQ9UQN3 213 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 ASF1AQ9Y294 204 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 DHRS7Q9Y394 339 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 LOXL2Q9Y4K0 774 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 GOLGA4Q13439 2230 aaKnown RBP2.36□□□□□ -2.03
VPS13A-208ENST00000423463 MN1Q10571 1320 aaPredicted RBP2.36□□□□□ -2.03
VPS13A-208ENST00000423463 LRP4O75096 1905 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 OR6C74A6NCV1 312 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 OR5K3A6NET4 321 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 IQCF5A8MTL0 148 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 A8MU76 341 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 E5RI56 91 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 NVLO15381 856 aaKnown RBP2.36□□□□□ -2.03
VPS13A-208ENST00000423463 NIPSNAP2O75323 286 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 BANF1O75531 89 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 SPAG6O75602 509 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 TNFSF15O95150 251 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 MPC1LP0DKB6 136 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 ERVK-10P10266 1014 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 ENO3P13929 434 aaPredicted RBP2.36□□□□□ -2.03
VPS13A-208ENST00000423463 CAPN3P20807 821 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 CD82P27701 267 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 ABCD3P28288 659 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 HSD17B2P37059 387 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 SLC1A2P43004 574 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 MAGEA4P43358 317 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 CAPZBP47756 277 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 TUBB4BP68371 445 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 GUCY2DQ02846 1103 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 PRKAA1Q13131 559 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 PRKG2Q13237 762 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 C16orf72Q14CZ0 275 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 ZNF789Q5FWF6 425 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 FAM180BQ6P0A1 224 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 CYB5D1Q6P9G0 228 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 AAGABQ6PD74 315 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 CNSTQ6PJW8 725 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 CYHR1Q6ZMK1 362 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 C3orf62Q6ZUJ4 267 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 TRIM73Q86UV7 250 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 SLC26A11Q86WA9 606 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 AMIGO1Q86WK6 493 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 DCUN1D3Q8IWE4 304 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 ZBED8Q8IZ13 594 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 RAB42Q8N4Z0 105 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 OR4E2Q8NGC2 313 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 OR52E1Q8NGJ3 308 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 OR5K2Q8NHB8 316 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 FBXO25Q8TCJ0 367 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 LKAAEAR1Q8TD35 194 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 CDKL2Q92772 493 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 APOPT1Q96IL0 206 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 SLC41A2Q96JW4 573 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 TGM7Q96PF1 710 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 TEFMQ96QE5 360 aaKnown RBP2.36□□□□□ -2.03
VPS13A-208ENST00000423463 WDR77Q9BQA1 342 aaPredicted RBP2.36□□□□□ -2.03
VPS13A-208ENST00000423463 ZPBPQ9BS86 351 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 DDA1Q9BW61 102 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 NPLQ9BXD5 320 aaPredicted RBP2.36□□□□□ -2.03
VPS13A-208ENST00000423463 RAB11FIP5Q9BXF6 653 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 CADM1Q9BY67 442 aaKnown RBP2.36□□□□□ -2.03
VPS13A-208ENST00000423463 PLAC1Q9HBJ0 212 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 SYTL2Q9HCH5 934 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 ASCL3Q9NQ33 180 aa2.36□□□□□ -2.03
VPS13A-208ENST00000423463 PPANQ9NQ55 473 aaKnown RBP2.36□□□□□ -2.03
VPS13A-208ENST00000423463 FBXO6Q9NRD1 293 aaPredicted RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms