RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 SERHLQ9NQF3 203 aa15.79■□□□□ 0.12
COL7A1-202ENST00000422991 TAS2R9Q9NYW1 312 aa15.79■□□□□ 0.12
COL7A1-202ENST00000422991 NTMQ9P121 344 aa15.79■□□□□ 0.12
COL7A1-202ENST00000422991 C19orf53Q9UNZ5 99 aaPredicted RBP15.79■□□□□ 0.12
COL7A1-202ENST00000422991 CAPN7Q9Y6W3 813 aa15.79■□□□□ 0.12
COL7A1-202ENST00000422991 NUP214P35658 2090 aaPredicted RBP15.79■□□□□ 0.12
COL7A1-202ENST00000422991 PIEZO2Q9H5I5 2752 aa15.78■□□□□ 0.12
COL7A1-202ENST00000422991 DYTNA2CJ06 578 aa15.78■□□□□ 0.12
COL7A1-202ENST00000422991 CCDC154A6NI56 674 aa15.78■□□□□ 0.12
COL7A1-202ENST00000422991 OR6C76A6NM76 312 aa15.78■□□□□ 0.12
COL7A1-202ENST00000422991 UPK1AO00322 258 aa15.78■□□□□ 0.12
COL7A1-202ENST00000422991 PRKNO60260 465 aaPredicted RBP15.78■□□□□ 0.12
COL7A1-202ENST00000422991 PRAMEF2O60811 474 aa15.78■□□□□ 0.12
COL7A1-202ENST00000422991 PSMG1O95456 288 aa15.78■□□□□ 0.12
COL7A1-202ENST00000422991 ABCB1P08183 1280 aaPredicted RBP15.78■□□□□ 0.12
COL7A1-202ENST00000422991 CCL11P51671 97 aa15.78■□□□□ 0.12
COL7A1-202ENST00000422991 MYBPC3Q14896 1274 aa15.78■□□□□ 0.12
COL7A1-202ENST00000422991 H3F3CQ6NXT2 135 aa15.78■□□□□ 0.12
COL7A1-202ENST00000422991 TMEM64Q6YI46 380 aa15.78■□□□□ 0.12
COL7A1-202ENST00000422991 ANKS4BQ8N8V4 417 aa15.78■□□□□ 0.12
COL7A1-202ENST00000422991 OR52R1Q8NGF1 315 aa15.78■□□□□ 0.12
COL7A1-202ENST00000422991 OR4A15Q8NGL6 344 aa15.78■□□□□ 0.12
COL7A1-202ENST00000422991 SFXN5Q8TD22 340 aa15.78■□□□□ 0.12
COL7A1-202ENST00000422991 EXTL1Q92935 676 aa15.78■□□□□ 0.12
COL7A1-202ENST00000422991 DEFB126Q9BYW3 111 aa15.78■□□□□ 0.12
COL7A1-202ENST00000422991 DDX18Q9NVP1 670 aaKnown RBP15.78■□□□□ 0.12
COL7A1-202ENST00000422991 GPR83Q9NYM4 423 aa15.78■□□□□ 0.12
COL7A1-202ENST00000422991 ARMCX1Q9P291 453 aa15.78■□□□□ 0.12
COL7A1-202ENST00000422991 BCAP29Q9UHQ4 241 aa15.78■□□□□ 0.12
COL7A1-202ENST00000422991 ERVK-11Q9UQG0 969 aa15.78■□□□□ 0.12
COL7A1-202ENST00000422991 A6NL46 340 aa15.77■□□□□ 0.12
COL7A1-202ENST00000422991 EMC8O43402 210 aa15.77■□□□□ 0.12
COL7A1-202ENST00000422991 COQ9O75208 318 aa15.77■□□□□ 0.12
COL7A1-202ENST00000422991 BCAS2O75934 225 aaPredicted RBP15.77■□□□□ 0.12
COL7A1-202ENST00000422991 ZFAND5O76080 213 aa15.77■□□□□ 0.12
COL7A1-202ENST00000422991 SOX11P35716 441 aa15.77■□□□□ 0.12
COL7A1-202ENST00000422991 EMDP50402 254 aa15.77■□□□□ 0.12
COL7A1-202ENST00000422991 RNF4P78317 190 aa15.77■□□□□ 0.12
COL7A1-202ENST00000422991 RHDQ02161 417 aa15.77■□□□□ 0.12
COL7A1-202ENST00000422991 EBPQ15125 230 aaKnown RBP15.77■□□□□ 0.12
COL7A1-202ENST00000422991 MAPKAPK3Q16644 382 aa15.77■□□□□ 0.12
COL7A1-202ENST00000422991 VPS26BQ4G0F5 336 aa15.77■□□□□ 0.12
COL7A1-202ENST00000422991 IRAK1BP1Q5VVH5 260 aa15.77■□□□□ 0.12
COL7A1-202ENST00000422991 ARMC10Q8N2F6 343 aa15.77■□□□□ 0.12
COL7A1-202ENST00000422991 SIRT6Q8N6T7 355 aa15.77■□□□□ 0.12
COL7A1-202ENST00000422991 LSM14AQ8ND56 463 aaKnown RBP15.77■□□□□ 0.12
COL7A1-202ENST00000422991 GOT1L1Q8NHS2 421 aaPredicted RBP15.77■□□□□ 0.12
COL7A1-202ENST00000422991 C16orf52Q8NHV5 167 aa15.77■□□□□ 0.12
COL7A1-202ENST00000422991 TSPEARQ8WU66 669 aa15.77■□□□□ 0.12
COL7A1-202ENST00000422991 FAM120BQ96EK7 910 aaKnown RBP15.77■□□□□ 0.12
COL7A1-202ENST00000422991 ITCHQ96J02 903 aa15.77■□□□□ 0.12
COL7A1-202ENST00000422991 MAGED4Q96JG8 741 aa15.77■□□□□ 0.12
COL7A1-202ENST00000422991 INPP5KQ9BT40 448 aa15.77■□□□□ 0.12
COL7A1-202ENST00000422991 WWTR1Q9GZV5 400 aa15.77■□□□□ 0.12
COL7A1-202ENST00000422991 RMND5AQ9H871 391 aa15.77■□□□□ 0.12
COL7A1-202ENST00000422991 C3orf14Q9HBI5 128 aa15.77■□□□□ 0.12
COL7A1-202ENST00000422991 PCDHGB4Q9UN71 923 aa15.77■□□□□ 0.12
COL7A1-202ENST00000422991 DTX4Q9Y2E6 619 aa15.77■□□□□ 0.12
COL7A1-202ENST00000422991 SNX8Q9Y5X2 465 aa15.77■□□□□ 0.12
COL7A1-202ENST00000422991 SMG1Q96Q15 3661 aaKnown RBP15.76■□□□□ 0.11
COL7A1-202ENST00000422991 A0A1W2PP18 115 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 TMEM200CA6NKL6 621 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 NDUFAB1O14561 156 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 ATXN7O15265 892 aaPredicted RBP15.76■□□□□ 0.11
COL7A1-202ENST00000422991 CPSF4O95639 269 aaKnown RBP15.76■□□□□ 0.11
COL7A1-202ENST00000422991 SOAT1P35610 550 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 CDKN2CP42773 168 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 POLE2P56282 527 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 GAB1Q13480 694 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 RAPSNQ13702 412 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 TLR1Q15399 786 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 CRB2Q5IJ48 1285 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 FCRLBQ6BAA4 426 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 SLC2A7Q6PXP3 512 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 SLC29A4Q7RTT9 530 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 LGI4Q8N135 537 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 SLC5A8Q8N695 610 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 CCDC197Q8NCU1 140 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 FDCSPQ8NFU4 85 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 NUBPLQ8TB37 319 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 BCAS4Q8TDM0 211 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 GTF2H4Q92759 462 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 MOAP1Q96BY2 351 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 BBC3Q96PG8 261 aaPredicted RBP15.76■□□□□ 0.11
COL7A1-202ENST00000422991 PANX1Q96RD7 426 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 GAL3ST4Q96RP7 486 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 NPAS2Q99743 824 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 CCDC106Q9BWC9 280 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 PRODH2Q9UF12 536 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 CFL2Q9Y281 166 aa15.76■□□□□ 0.11
COL7A1-202ENST00000422991 HEMK1Q9Y5R4 338 aaPredicted RBP15.76■□□□□ 0.11
COL7A1-202ENST00000422991 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.75■□□□□ 0.11
COL7A1-202ENST00000422991 A8MUI8 341 aa15.75■□□□□ 0.11
COL7A1-202ENST00000422991 ERVH48-1M5A8F1 160 aa15.75■□□□□ 0.11
COL7A1-202ENST00000422991 RFXANKO14593 260 aa15.75■□□□□ 0.11
COL7A1-202ENST00000422991 DCTN3O75935 186 aa15.75■□□□□ 0.11
COL7A1-202ENST00000422991 SNRPB2P08579 225 aaKnown RBP15.75■□□□□ 0.11
COL7A1-202ENST00000422991 PTPN6P29350 595 aa15.75■□□□□ 0.11
COL7A1-202ENST00000422991 CCT3P49368 545 aaKnown RBP15.75■□□□□ 0.11
COL7A1-202ENST00000422991 PRR5P85299 388 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms