RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 CLCA1A8K7I4 914 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 AIREO43918 545 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 PTHP01270 115 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 CPN2P22792 545 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 KCNJ5P48544 419 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 UGT2B15P54855 530 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 CHRNEQ04844 493 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 TMEM35AQ53FP2 167 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 CASP12Q6UXS9 341 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 Q6ZSR6 202 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 KIAA1549LQ6ZVL6 1849 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 IQCHQ86VS3 1027 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 VRK2Q86Y07 508 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 TCEANCQ8N8B7 351 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 FBLIM1Q8WUP2 373 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 RLN3Q8WXF3 142 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 PMM1Q92871 262 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 OTULINQ96BN8 352 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 ZNF354BQ96LW1 612 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 PITX2Q99697 317 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 A4GALTQ9NPC4 353 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 PSORS1C1Q9UIG5 152 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 NAALAD2Q9Y3Q0 740 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 LOC105369274A0A096LPK9 316 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 LOC102723532A0A0G2JNH3 316 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 CLDN24A6NM45 220 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 GADD45AP24522 165 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 ELAVL4P26378 380 aaKnown RBP10.31□□□□□ -0.76
DDX56-203ENST00000421223 SERPINB1P30740 379 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 XKP51811 444 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 STXBP1P61764 594 aaKnown RBP10.31□□□□□ -0.76
DDX56-203ENST00000421223 MAP4K2Q12851 820 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 ADAM15Q13444 863 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 RRM2BQ7LG56 351 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 OR4N4Q8N0Y3 316 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 WDR36Q8NI36 951 aaKnown RBP10.31□□□□□ -0.76
DDX56-203ENST00000421223 IPCEF1Q8WWN9 437 aaPredicted RBP10.31□□□□□ -0.76
DDX56-203ENST00000421223 C6orf62Q9GZU0 229 aaPredicted RBP10.31□□□□□ -0.76
DDX56-203ENST00000421223 ACSS1Q9NUB1 689 aaPredicted RBP10.31□□□□□ -0.76
DDX56-203ENST00000421223 CLN6Q9NWW5 311 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 IL20RAQ9UHF4 553 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 SLC9A8Q9Y2E8 581 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 NTNG1Q9Y2I2 539 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 TSC22D4Q9Y3Q8 395 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 AP1M2Q9Y6Q5 423 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 LAMA1P25391 3075 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 TLR4O00206 839 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 FCMRO60667 390 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 LDB3O75112 727 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 CNOT3O75175 753 aaKnown RBP10.31□□□□□ -0.76
DDX56-203ENST00000421223 GUCY1B2O75343 617 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 ENTPD6O75354 484 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 CELA2BP08218 269 aaPredicted RBP10.31□□□□□ -0.76
DDX56-203ENST00000421223 SLC35G6P0C7Q6 338 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 CBLP22681 906 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 KHKP50053 298 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 RGS1Q08116 209 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 GPR18Q14330 331 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 NFATC4Q14934 902 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 ZNF311Q5JNZ3 666 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 CLEC12AQ5QGZ9 265 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 CCNJQ5T5M9 372 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 PODNL1Q6PEZ8 512 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 ASPGQ86U10 573 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 ZNF675Q8TD23 568 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 ADAMTS15Q8TE58 950 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 ITPAQ9BY32 194 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 RBCK1Q9BYM8 510 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 OR51E2Q9H255 320 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 ADAP2Q9NPF8 381 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 CD207Q9UJ71 328 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 CYP8B1Q9UNU6 501 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 LRRC72A6NJI9 287 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 TLX2O43763 284 aaPredicted RBP10.31□□□□□ -0.76
DDX56-203ENST00000421223 KDM1AO60341 852 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 CTSVO60911 334 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 TAS2R41P59536 307 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 SRP54P61011 504 aaKnown RBP10.31□□□□□ -0.76
DDX56-203ENST00000421223 ABATP80404 500 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 PRR5P85299 388 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 TGM3Q08188 693 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 DEFB110Q30KQ9 67 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 ARMCX4Q5H9R4 360 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 SYT6Q5T7P8 510 aaPredicted RBP10.31□□□□□ -0.76
DDX56-203ENST00000421223 PRSS41Q7RTY9 318 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 VN1R4Q7Z5H5 301 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 TAF8Q7Z7C8 310 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 ZNF554Q86TJ5 538 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 SLC34A3Q8N130 599 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 SUN3Q8TAQ9 357 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 OR5M11Q96RB7 305 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 S1PR5Q9H228 398 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 NT5DC2Q9H857 520 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 TMEM74BQ9NUR3 256 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 ANKMY1Q9P2S6 941 aa10.31□□□□□ -0.76
DDX56-203ENST00000421223 CH25HO95992 272 aa10.3□□□□□ -0.76
DDX56-203ENST00000421223 CDK1P06493 297 aa10.3□□□□□ -0.76
DDX56-203ENST00000421223 HNRNPCP07910 306 aaKnown RBP eCLIP10.3□□□□□ -0.76
DDX56-203ENST00000421223 NR2F6P10588 404 aa10.3□□□□□ -0.76
DDX56-203ENST00000421223 HNRNPA2B1P22626 353 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms