RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 SOX3P41225 446 aa17.25■□□□□ 0.35
PTCD3-204ENST00000418628 CYB561P49447 251 aa17.25■□□□□ 0.35
PTCD3-204ENST00000418628 EMDP50402 254 aa17.25■□□□□ 0.35
PTCD3-204ENST00000418628 ST13P50502 369 aaKnown RBP17.25■□□□□ 0.35
PTCD3-204ENST00000418628 CLDN8P56748 225 aa17.25■□□□□ 0.35
PTCD3-204ENST00000418628 TLE1Q04724 770 aa17.25■□□□□ 0.35
PTCD3-204ENST00000418628 EXOSC7Q15024 291 aaKnown RBP17.25■□□□□ 0.35
PTCD3-204ENST00000418628 SLC29A4Q7RTT9 530 aa17.25■□□□□ 0.35
PTCD3-204ENST00000418628 PRICKLE2Q7Z3G6 844 aa17.25■□□□□ 0.35
PTCD3-204ENST00000418628 R3HCC1LQ7Z5L2 792 aaKnown RBP17.25■□□□□ 0.35
PTCD3-204ENST00000418628 SLC15A4Q8N697 577 aa17.25■□□□□ 0.35
PTCD3-204ENST00000418628 OR7G2Q8NG99 324 aa17.25■□□□□ 0.35
PTCD3-204ENST00000418628 ACTRT2Q8TDY3 377 aa17.25■□□□□ 0.35
PTCD3-204ENST00000418628 TP53INP1Q96A56 240 aa17.25■□□□□ 0.35
PTCD3-204ENST00000418628 PPCDCQ96CD2 204 aa17.25■□□□□ 0.35
PTCD3-204ENST00000418628 BBS4Q96RK4 519 aa17.25■□□□□ 0.35
PTCD3-204ENST00000418628 SH2D2AQ9NP31 389 aa17.25■□□□□ 0.35
PTCD3-204ENST00000418628 ACSS1Q9NUB1 689 aaPredicted RBP17.25■□□□□ 0.35
PTCD3-204ENST00000418628 ANKRD10Q9NXR5 420 aa17.25■□□□□ 0.35
PTCD3-204ENST00000418628 LRFN1Q9P244 771 aa17.25■□□□□ 0.35
PTCD3-204ENST00000418628 EIF3LQ9Y262 564 aaKnown RBP17.25■□□□□ 0.35
PTCD3-204ENST00000418628 NME2P1O60361 137 aa17.24■□□□□ 0.35
PTCD3-204ENST00000418628 OR6B1O95007 311 aa17.24■□□□□ 0.35
PTCD3-204ENST00000418628 KITP10721 976 aa17.24■□□□□ 0.35
PTCD3-204ENST00000418628 PLA2G2AP14555 144 aa17.24■□□□□ 0.35
PTCD3-204ENST00000418628 PRPS1L1P21108 318 aa17.24■□□□□ 0.35
PTCD3-204ENST00000418628 NME2P22392 152 aa17.24■□□□□ 0.35
PTCD3-204ENST00000418628 EPHA3P29320 983 aa17.24■□□□□ 0.35
PTCD3-204ENST00000418628 NCBP2P52298 156 aaKnown RBP eCLIP17.24■□□□□ 0.35
PTCD3-204ENST00000418628 MLC1Q15049 377 aa17.24■□□□□ 0.35
PTCD3-204ENST00000418628 SLC9B1Q4ZJI4 515 aa17.24■□□□□ 0.35
PTCD3-204ENST00000418628 ZNF766Q5HY98 468 aa17.24■□□□□ 0.35
PTCD3-204ENST00000418628 SPINK14Q6IE38 97 aa17.24■□□□□ 0.35
PTCD3-204ENST00000418628 OR2L13Q8N349 312 aa17.24■□□□□ 0.35
PTCD3-204ENST00000418628 KRTCAP2Q8N6L1 136 aa17.24■□□□□ 0.35
PTCD3-204ENST00000418628 OR7A2PQ8NGA2 310 aa17.24■□□□□ 0.35
PTCD3-204ENST00000418628 OR52R1Q8NGF1 315 aa17.24■□□□□ 0.35
PTCD3-204ENST00000418628 KAT2AQ92830 837 aa17.24■□□□□ 0.35
PTCD3-204ENST00000418628 CIDECQ96AQ7 238 aaPredicted RBP17.24■□□□□ 0.35
PTCD3-204ENST00000418628 MIB2Q96AX9 1013 aa17.24■□□□□ 0.35
PTCD3-204ENST00000418628 COQ8BQ96D53 544 aa17.24■□□□□ 0.35
PTCD3-204ENST00000418628 ITPAQ9BY32 194 aa17.24■□□□□ 0.35
PTCD3-204ENST00000418628 HES7Q9BYE0 225 aa17.24■□□□□ 0.35
PTCD3-204ENST00000418628 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.24■□□□□ 0.35
PTCD3-204ENST00000418628 AIG1Q9NVV5 245 aa17.24■□□□□ 0.35
PTCD3-204ENST00000418628 MAP10Q9P2G4 905 aa17.24■□□□□ 0.35
PTCD3-204ENST00000418628 ASPDHA6ND91 283 aa17.23■□□□□ 0.35
PTCD3-204ENST00000418628 SLC25A12O75746 678 aa17.23■□□□□ 0.35
PTCD3-204ENST00000418628 BCAS2O75934 225 aaPredicted RBP17.23■□□□□ 0.35
PTCD3-204ENST00000418628 FBXO45P0C2W1 286 aa17.23■□□□□ 0.35
PTCD3-204ENST00000418628 LAMP1P11279 417 aa17.23■□□□□ 0.35
PTCD3-204ENST00000418628 MC3RP41968 323 aa17.23■□□□□ 0.35
PTCD3-204ENST00000418628 MLLT10P55197 1068 aa17.23■□□□□ 0.35
PTCD3-204ENST00000418628 INPP5JQ15735 1006 aaPredicted RBP17.23■□□□□ 0.35
PTCD3-204ENST00000418628 ZNF791Q3KP31 576 aaPredicted RBP17.23■□□□□ 0.35
PTCD3-204ENST00000418628 EPGNQ6UW88 154 aa17.23■□□□□ 0.35
PTCD3-204ENST00000418628 ZNF605Q86T29 641 aa17.23■□□□□ 0.35
PTCD3-204ENST00000418628 CYP4Z2PQ8N1L4 340 aa17.23■□□□□ 0.35
PTCD3-204ENST00000418628 PSMA8Q8TAA3 256 aa17.23■□□□□ 0.35
PTCD3-204ENST00000418628 SLC22A8Q8TCC7 542 aa17.23■□□□□ 0.35
PTCD3-204ENST00000418628 NUDT8Q8WV74 236 aa17.23■□□□□ 0.35
PTCD3-204ENST00000418628 DYDC1Q8WWB3 177 aa17.23■□□□□ 0.35
PTCD3-204ENST00000418628 STON2Q8WXE9 905 aa17.23■□□□□ 0.35
PTCD3-204ENST00000418628 HOXB13Q92826 284 aaPredicted RBP17.23■□□□□ 0.35
PTCD3-204ENST00000418628 SNRNP40Q96DI7 357 aaKnown RBP17.23■□□□□ 0.35
PTCD3-204ENST00000418628 VSTM2LQ96N03 204 aa17.23■□□□□ 0.35
PTCD3-204ENST00000418628 BTBD9Q96Q07 612 aa17.23■□□□□ 0.35
PTCD3-204ENST00000418628 TAAR6Q96RI8 345 aa17.23■□□□□ 0.35
PTCD3-204ENST00000418628 GAL3ST4Q96RP7 486 aa17.23■□□□□ 0.35
PTCD3-204ENST00000418628 WDR55Q9H6Y2 383 aaPredicted RBP17.23■□□□□ 0.35
PTCD3-204ENST00000418628 ANKRA2Q9H9E1 313 aa17.23■□□□□ 0.35
PTCD3-204ENST00000418628 NTMQ9P121 344 aa17.23■□□□□ 0.35
PTCD3-204ENST00000418628 C19orf53Q9UNZ5 99 aaPredicted RBP17.23■□□□□ 0.35
PTCD3-204ENST00000418628 MAPRE3Q9UPY8 281 aa17.23■□□□□ 0.35
PTCD3-204ENST00000418628 CFL2Q9Y281 166 aa17.23■□□□□ 0.35
PTCD3-204ENST00000418628 USH1CQ9Y6N9 552 aa17.23■□□□□ 0.35
PTCD3-204ENST00000418628 RELNP78509 3460 aa17.23■□□□□ 0.35
PTCD3-204ENST00000418628 TENM4Q6N022 2769 aa17.23■□□□□ 0.35
PTCD3-204ENST00000418628 C2orf92A0A1B0GVN3 265 aa17.22■□□□□ 0.35
PTCD3-204ENST00000418628 ZNF324BQ6AW86 544 aaPredicted RBP17.22■□□□□ 0.35
PTCD3-204ENST00000418628 OPN5Q6U736 354 aa17.22■□□□□ 0.35
PTCD3-204ENST00000418628 ZNF551Q7Z340 670 aaPredicted RBP17.22■□□□□ 0.35
PTCD3-204ENST00000418628 MDGA2Q7Z553 956 aa17.22■□□□□ 0.35
PTCD3-204ENST00000418628 DND1Q8IYX4 353 aaKnown RBP17.22■□□□□ 0.35
PTCD3-204ENST00000418628 TMEM156Q8N614 296 aa17.22■□□□□ 0.35
PTCD3-204ENST00000418628 HORMAD2Q8N7B1 307 aa17.22■□□□□ 0.35
PTCD3-204ENST00000418628 GOLM1Q8NBJ4 401 aa17.22■□□□□ 0.35
PTCD3-204ENST00000418628 CPT1CQ8TCG5 803 aa17.22■□□□□ 0.35
PTCD3-204ENST00000418628 ASB15Q8WXK1 588 aa17.22■□□□□ 0.35
PTCD3-204ENST00000418628 TESCQ96BS2 214 aa17.22■□□□□ 0.35
PTCD3-204ENST00000418628 SPACA9Q96E40 222 aaPredicted RBP17.22■□□□□ 0.35
PTCD3-204ENST00000418628 ELP4Q96EB1 424 aa17.22■□□□□ 0.35
PTCD3-204ENST00000418628 ZBED6CLQ96FA7 236 aaPredicted RBP17.22■□□□□ 0.35
PTCD3-204ENST00000418628 NXF5Q9H1B4 397 aaKnown RBP17.22■□□□□ 0.35
PTCD3-204ENST00000418628 SIRT3Q9NTG7 399 aaPredicted RBP17.22■□□□□ 0.35
PTCD3-204ENST00000418628 PRODH2Q9UF12 536 aa17.22■□□□□ 0.35
PTCD3-204ENST00000418628 GOLGA8QA0A0J9YX86 632 aa17.21■□□□□ 0.35
PTCD3-204ENST00000418628 GOLGA8OA6NCC3 632 aa17.21■□□□□ 0.35
PTCD3-204ENST00000418628 TTLL8A6PVC2 850 aa17.21■□□□□ 0.35
PTCD3-204ENST00000418628 A8MVJ9 347 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms