RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 FAM166BA8MTA8 275 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 TMX2-CTNND1H3BSU7 103 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 PSMD3O43242 534 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 TYROBPO43914 113 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 CPNE6O95741 557 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 EPOP01588 193 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 TBPP20226 339 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 MAGP20916 626 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 PTBP1P26599 531 aaKnown RBP eCLIP0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 SAA4P35542 130 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 SLC7A2P52569 658 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 ZNF85Q03923 595 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 BCL2L1Q07817 233 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 OR1C1Q15619 314 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 CD226Q15762 336 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 KRTAP6-3Q3LI67 103 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 CMPK2Q5EBM0 449 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 TCHHL1Q5QJ38 904 aaPredicted RBP0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 SNRNP48Q6IEG0 339 aaKnown RBP0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 RHBDD2Q6NTF9 364 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 UFSP1Q6NVU6 142 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 STEAP1BQ6NZ63 245 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 MZT2BQ6NZ67 158 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 PIWIL3Q7Z3Z3 882 aaKnown RBP0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 PRPF39Q86UA1 669 aaKnown RBP0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 CCDC71LQ8N9Z2 235 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 UXS1Q8NBZ7 420 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 ICA1LQ8NDH6 482 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 FBXO25Q8TCJ0 367 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 TRAF3IP1Q8TDR0 691 aaPredicted RBP0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 DCUN1D4Q92564 292 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 C9orf85Q96MD7 179 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 RASL10BQ96S79 203 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 INTS14Q96SY0 518 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 SSX3Q99909 188 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 FAM173AQ9BQD7 235 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 HCAR1Q9BXC0 346 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 ING2Q9H160 280 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 MYH16Q9H6N6 1097 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 ESM1Q9NQ30 184 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 SENP1Q9P0U3 644 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 PHF11Q9UIL8 331 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 PDE10AQ9Y233 779 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 ZNF835Q9Y2P0 537 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 FLVCR1Q9Y5Y0 555 aa0.64□□□□□ -2.31
RNU2-55P-201ENST00000411146 KIR2DS1A0A191URI9 304 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 ILVBLA1L0T0 632 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 MAGEB16A2A368 324 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 ANXA2P2A6NMY6 339 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 SERPINE3A8MV23 424 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 MEI4A8MW99 385 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 A8MXE2 369 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 WWP2O00308 870 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 CCSO14618 274 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 ABCD4O14678 606 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 LCMT2O60294 686 aaKnown RBP0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 RANBP6O60518 1105 aaKnown RBP0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 LETM1O95202 739 aaPredicted RBP0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 NUDT14O95848 222 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 NUDT17P0C025 328 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 ZNF286BP0CG31 522 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 MAGEB1P43366 347 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 NPY4RP50391 375 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 LHX2P50458 406 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 CCR6P51684 374 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 NAGLUP54802 743 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 VCPP55072 806 aaKnown RBP0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 RPS4XP62701 263 aaKnown RBP0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 UNC119Q13432 240 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 PRPF4BQ13523 1007 aaKnown RBP0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 KIR2DS1Q14954 304 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 EPC2Q52LR7 807 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 KPRPQ5T749 579 aaPredicted RBP0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 SHEQ5VZ18 495 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 RPUSD3Q6P087 351 aaKnown RBP0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 CYP4V2Q6ZWL3 525 aaPredicted RBP0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 ABHD12BQ7Z5M8 362 aaPredicted RBP0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 LUZP1Q86V48 1076 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 ZNF695Q8IW36 515 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 AQP12AQ8IXF9 295 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 C9orf40Q8IXQ3 194 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 IQUBQ8NA54 791 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 C20orf203Q8NBC4 194 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 BBS1Q8NFJ9 593 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 ZNF596Q8TC21 504 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 TFB1MQ8WVM0 346 aaKnown RBP0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 TADA1Q96BN2 335 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 MRPL53Q96EL3 112 aaKnown RBP0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 CXorf58Q96LI9 332 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 SLF1Q9BQI6 1058 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 ATG101Q9BSB4 218 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 NUSAP1Q9BXS6 441 aaKnown RBP0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 TRIM9Q9C026 710 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 NRN1Q9NPD7 142 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 MEPEQ9NQ76 525 aaPredicted RBP0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 EMCNQ9ULC0 261 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 MYO16Q9Y6X6 1858 aa0.63□□□□□ -2.31
RNU2-55P-201ENST00000411146 A0A087WV48 116 aa0.62□□□□□ -2.31
RNU2-55P-201ENST00000411146 A0A0A6YYD4 124 aa0.62□□□□□ -2.31
RNU2-55P-201ENST00000411146 LRRD1A4D1F6 860 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms