RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 SLC37A2Q8TED4 501 aa18.92■□□□□ 0.62
USP39-204ENST00000409766 KAT2AQ92830 837 aa18.92■□□□□ 0.62
USP39-204ENST00000409766 GIMAP5Q96F15 307 aa18.92■□□□□ 0.62
USP39-204ENST00000409766 GPR174Q9BXC1 333 aa18.92■□□□□ 0.62
USP39-204ENST00000409766 WSB2Q9NYS7 404 aaPredicted RBP18.92■□□□□ 0.62
USP39-204ENST00000409766 PSORS1C1Q9UIG5 152 aa18.92■□□□□ 0.62
USP39-204ENST00000409766 DAPP1Q9UN19 280 aa18.92■□□□□ 0.62
USP39-204ENST00000409766 A4GNTQ9UNA3 340 aa18.92■□□□□ 0.62
USP39-204ENST00000409766 OR5K4A6NMS3 321 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 M0R3H8 397 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 MBTPS2O43462 519 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 ASNA1O43681 348 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 MAN1A2O60476 641 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 DNAJB6O75190 326 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 OXSR1O95747 527 aaPredicted RBP18.91■□□□□ 0.62
USP39-204ENST00000409766 ADAP00813 363 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 THEGLP0DJG4 465 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 ZNF182P17025 639 aaPredicted RBP18.91■□□□□ 0.62
USP39-204ENST00000409766 STT3AP46977 705 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 LRIT3Q3SXY7 679 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 BAHD1Q8TBE0 780 aaPredicted RBP18.91■□□□□ 0.62
USP39-204ENST00000409766 C2orf42Q9NWW7 574 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 HRASLS2Q9NWW9 162 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 ZAR1LA6NP61 321 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 H0YGG7 62 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 FAAHO00519 579 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 FADS2O95864 444 aaKnown RBP18.91■□□□□ 0.62
USP39-204ENST00000409766 LGI1O95970 557 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 CHRNB1P11230 501 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 PVRP15151 417 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 CHMP24386 653 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 CRISP1P54107 249 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 SMIM11AP58511 58 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 ARF3P61204 181 aaPredicted RBP18.91■□□□□ 0.62
USP39-204ENST00000409766 GPAT3Q53EU6 434 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 ABHD13Q7L211 337 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 SYT13Q7L8C5 426 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 LRRC25Q8N386 305 aaPredicted RBP18.91■□□□□ 0.62
USP39-204ENST00000409766 DNAJC22Q8N4W6 341 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 EQTNQ9NQ60 294 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 SLC2A4RGQ9NR83 387 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 FKBP14Q9NWM8 211 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 NTMQ9P121 344 aa18.91■□□□□ 0.62
USP39-204ENST00000409766 B3GALT2O43825 422 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 SRFP11831 508 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 XKP51811 444 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 PIN1Q13526 163 aaPredicted RBP18.9■□□□□ 0.62
USP39-204ENST00000409766 CTF1Q16619 201 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 CCDC81Q6ZN84 652 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 TAF8Q7Z7C8 310 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 HMGN2P46Q86SG4 172 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 SAMD14Q8IZD0 417 aaPredicted RBP18.9■□□□□ 0.62
USP39-204ENST00000409766 NLGN4XQ8N0W4 816 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 SLC7A13Q8TCU3 470 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 RSC1A1Q92681 617 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 TANKQ92844 425 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 COPS4Q9BT78 406 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 PRDM9Q9NQV7 894 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 TMEM74BQ9NUR3 256 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 REV1Q9UBZ9 1251 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 MGAT4BQ9UQ53 548 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 SLC9A8Q9Y2E8 581 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 SLC22A7Q9Y694 548 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 SLCO1B1Q9Y6L6 691 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 TDRD6O60522 2096 aaKnown RBP18.9■□□□□ 0.62
USP39-204ENST00000409766 A0A1B0GVG6 124 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 CLCA1A8K7I4 914 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 CASC3O15234 703 aaKnown RBP18.9■□□□□ 0.62
USP39-204ENST00000409766 BCAS1O75363 584 aaPredicted RBP18.9■□□□□ 0.62
USP39-204ENST00000409766 SMAD4Q13485 552 aaKnown RBP18.9■□□□□ 0.62
USP39-204ENST00000409766 LEXMQ3ZCV2 418 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 TMEM236Q5W0B7 351 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 OR7G2Q8NG99 324 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 OR4K14Q8NGD5 310 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 OR6T1Q8NGN1 323 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 RERGQ96A58 199 aaPredicted RBP18.9■□□□□ 0.62
USP39-204ENST00000409766 ORAI3Q9BRQ5 295 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 ACTRT3Q9BYD9 372 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 UCK2Q9BZX2 261 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 SLC38A1Q9H2H9 487 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 IMPAD1Q9NX62 359 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 MS4A12Q9NXJ0 267 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 SLC6A14Q9UN76 642 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 LIPT1Q9Y234 373 aa18.9■□□□□ 0.62
USP39-204ENST00000409766 MRPS2Q9Y399 296 aaKnown RBP18.9■□□□□ 0.62
USP39-204ENST00000409766 A0A0J9YY10 115 aa18.89■□□□□ 0.61
USP39-204ENST00000409766 A0A1W2PPC4 97 aa18.89■□□□□ 0.61
USP39-204ENST00000409766 A0A1W2PRQ8 180 aa18.89■□□□□ 0.61
USP39-204ENST00000409766 SH3PXD2BA1X283 911 aa18.89■□□□□ 0.61
USP39-204ENST00000409766 ZSCAN9O15535 394 aaPredicted RBP18.89■□□□□ 0.61
USP39-204ENST00000409766 OR10H3O60404 316 aa18.89■□□□□ 0.61
USP39-204ENST00000409766 UGT2B17O75795 530 aa18.89■□□□□ 0.61
USP39-204ENST00000409766 ALOX12P18054 663 aa18.89■□□□□ 0.61
USP39-204ENST00000409766 ZNF10P21506 573 aaPredicted RBP18.89■□□□□ 0.61
USP39-204ENST00000409766 TLX1P31314 330 aaPredicted RBP18.89■□□□□ 0.61
USP39-204ENST00000409766 CTSKP43235 329 aa18.89■□□□□ 0.61
USP39-204ENST00000409766 SIM1P81133 766 aaPredicted RBP18.89■□□□□ 0.61
USP39-204ENST00000409766 AQP6Q13520 282 aa18.89■□□□□ 0.61
USP39-204ENST00000409766 DCTN2Q13561 401 aaKnown RBP18.89■□□□□ 0.61
USP39-204ENST00000409766 DGCR6Q14129 220 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms