RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 PRAMEF27A3QJZ7 478 aa11.64□□□□□ -0.55
CHMP3-204ENST00000409727 HRKO00198 91 aa11.64□□□□□ -0.55
CHMP3-204ENST00000409727 PLOD2O00469 737 aa11.64□□□□□ -0.55
CHMP3-204ENST00000409727 BMP10O95393 424 aa11.64□□□□□ -0.55
CHMP3-204ENST00000409727 TNNI3P19429 210 aa11.64□□□□□ -0.55
CHMP3-204ENST00000409727 FASP25445 335 aa11.64□□□□□ -0.55
CHMP3-204ENST00000409727 HSD17B7P56937 341 aa11.64□□□□□ -0.55
CHMP3-204ENST00000409727 INTS11Q5TA45 600 aaKnown RBP11.64□□□□□ -0.55
CHMP3-204ENST00000409727 RHBDD2Q6NTF9 364 aa11.64□□□□□ -0.55
CHMP3-204ENST00000409727 REEP3Q6NUK4 255 aa11.64□□□□□ -0.55
CHMP3-204ENST00000409727 MFSD12Q6NUT3 480 aa11.64□□□□□ -0.55
CHMP3-204ENST00000409727 RBM44Q6ZP01 1051 aaKnown RBP11.64□□□□□ -0.55
CHMP3-204ENST00000409727 GALNT12Q8IXK2 581 aa11.64□□□□□ -0.55
CHMP3-204ENST00000409727 VWA5B2Q8N398 1253 aa11.64□□□□□ -0.55
CHMP3-204ENST00000409727 ANKFN1Q8N957 763 aa11.64□□□□□ -0.55
CHMP3-204ENST00000409727 SLC16A11Q8NCK7 471 aa11.64□□□□□ -0.55
CHMP3-204ENST00000409727 OR52E4Q8NGH9 312 aa11.64□□□□□ -0.55
CHMP3-204ENST00000409727 TSLPQ969D9 159 aa11.64□□□□□ -0.55
CHMP3-204ENST00000409727 CNPPD1Q9BV87 410 aa11.64□□□□□ -0.55
CHMP3-204ENST00000409727 ACTRT3Q9BYD9 372 aa11.64□□□□□ -0.55
CHMP3-204ENST00000409727 ASPSCR1Q9BZE9 553 aa11.64□□□□□ -0.55
CHMP3-204ENST00000409727 PNO1Q9NRX1 252 aaKnown RBP11.64□□□□□ -0.55
CHMP3-204ENST00000409727 ADPRHL2Q9NX46 363 aa11.64□□□□□ -0.55
CHMP3-204ENST00000409727 CLDN16Q9Y5I7 305 aa11.64□□□□□ -0.55
CHMP3-204ENST00000409727 BLACEA4D250 179 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 SAC3D1A6NKF1 404 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 A8MUA0 341 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 hCG_2039718K7EN88 272 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 POLR1CO15160 346 aaPredicted RBP11.63□□□□□ -0.55
CHMP3-204ENST00000409727 SUV39H1O43463 412 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 CBFA2T3O75081 653 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 TNFRSF1BP20333 461 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 SSTR4P31391 388 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 ANXA11P50995 505 aaKnown RBP11.63□□□□□ -0.55
CHMP3-204ENST00000409727 MGAT2Q10469 447 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 TRA2AQ13595 282 aaKnown RBP eCLIP11.63□□□□□ -0.55
CHMP3-204ENST00000409727 ZNF267Q14586 743 aaPredicted RBP11.63□□□□□ -0.55
CHMP3-204ENST00000409727 MAPK11Q15759 364 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 CSRP2Q16527 193 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 GPAT3Q53EU6 434 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 FHL5Q5TD97 284 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 CBLL1Q75N03 491 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 EIF3MQ7L2H7 374 aaKnown RBP11.63□□□□□ -0.55
CHMP3-204ENST00000409727 LAPTM4BQ86VI4 370 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 KBTBD2Q8IY47 623 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 ST13P4Q8IZP2 240 aaPredicted RBP11.63□□□□□ -0.55
CHMP3-204ENST00000409727 EID3Q8N140 333 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 PAPD5Q8NDF8 572 aaKnown RBP11.63□□□□□ -0.55
CHMP3-204ENST00000409727 OR52R1Q8NGF1 315 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 ADAMTS15Q8TE58 950 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 CDS1Q92903 461 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 PMEPA1Q969W9 287 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 EME1Q96AY2 570 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 TAMM41Q96BW9 452 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 VPS50Q96JG6 964 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 OR1F2PQ96R84 312 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 RUBCNLQ9H714 662 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 CXorf21Q9HAI6 301 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 AGPAT4Q9NRZ5 378 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 SLC22A11Q9NSA0 550 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 OLAHQ9NV23 265 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 MKL2Q9ULH7 1088 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 C19orf53Q9UNZ5 99 aaPredicted RBP11.63□□□□□ -0.55
CHMP3-204ENST00000409727 COL5A1P20908 1838 aaPredicted RBP11.63□□□□□ -0.55
CHMP3-204ENST00000409727 PGM3O95394 542 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 ITIH1P19827 911 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 GCKP35557 465 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 STT3AP46977 705 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 CLCN2P51788 898 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 EFNA3P52797 238 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 FUT5Q11128 374 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 MYBPC3Q14896 1274 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 NKAIN1Q4KMZ8 207 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 FAAH2Q6GMR7 532 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 IZUMO2Q6UXV1 221 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 COX15Q7KZN9 410 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 C16orf62Q7Z3J2 963 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 TMEM151BQ8IW70 566 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 ZNF675Q8TD23 568 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 SLC35A4Q96G79 324 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 CIB1Q99828 191 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 TREX2Q9BQ50 279 aaPredicted RBP11.63□□□□□ -0.55
CHMP3-204ENST00000409727 KLHL4Q9C0H6 718 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 THUMPD1Q9NXG2 353 aaKnown RBP11.63□□□□□ -0.55
CHMP3-204ENST00000409727 HCN4Q9Y3Q4 1203 aa11.63□□□□□ -0.55
CHMP3-204ENST00000409727 A0A087WV62 115 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 CASQ2O14958 399 aaPredicted RBP11.62□□□□□ -0.55
CHMP3-204ENST00000409727 PLOD3O60568 738 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 DIRAS1O95057 198 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 H6PDO95479 791 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 CBX7O95931 251 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 LDLRP01130 860 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 CHRM4P08173 479 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 FCGR1AP12314 374 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 ZNF28P17035 718 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 OR1E2P47887 323 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 MAN2A2P49641 1150 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 PCBP3P57721 371 aaKnown RBP11.62□□□□□ -0.55
CHMP3-204ENST00000409727 IGLV3-21P80748 117 aaPredicted RBP11.62□□□□□ -0.55
CHMP3-204ENST00000409727 ZNF155Q12901 538 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms