RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 UPK1AO00322 258 aa15.44■□□□□ 0.06
SUMO1-208ENST00000409627 EMC8O43402 210 aa15.44■□□□□ 0.06
SUMO1-208ENST00000409627 CEACAM4O75871 244 aa15.44■□□□□ 0.06
SUMO1-208ENST00000409627 ZFAND5O76080 213 aa15.44■□□□□ 0.06
SUMO1-208ENST00000409627 CPSF4O95639 269 aaKnown RBP15.44■□□□□ 0.06
SUMO1-208ENST00000409627 ABCB1P08183 1280 aaPredicted RBP15.44■□□□□ 0.06
SUMO1-208ENST00000409627 ITGA3P26006 1051 aa15.44■□□□□ 0.06
SUMO1-208ENST00000409627 PRR5P85299 388 aa15.44■□□□□ 0.06
SUMO1-208ENST00000409627 IRAK1BP1Q5VVH5 260 aa15.44■□□□□ 0.06
SUMO1-208ENST00000409627 H3F3CQ6NXT2 135 aa15.44■□□□□ 0.06
SUMO1-208ENST00000409627 BORAQ6PGQ7 559 aa15.44■□□□□ 0.06
SUMO1-208ENST00000409627 C9orf40Q8IXQ3 194 aa15.44■□□□□ 0.06
SUMO1-208ENST00000409627 SIMC1Q8NDZ2 872 aa15.44■□□□□ 0.06
SUMO1-208ENST00000409627 NUBPLQ8TB37 319 aa15.44■□□□□ 0.06
SUMO1-208ENST00000409627 GTF2H4Q92759 462 aa15.44■□□□□ 0.06
SUMO1-208ENST00000409627 FAM120BQ96EK7 910 aaKnown RBP15.44■□□□□ 0.06
SUMO1-208ENST00000409627 LRRC37BQ96QE4 947 aa15.44■□□□□ 0.06
SUMO1-208ENST00000409627 DEFB126Q9BYW3 111 aa15.44■□□□□ 0.06
SUMO1-208ENST00000409627 ANKRA2Q9H9E1 313 aa15.44■□□□□ 0.06
SUMO1-208ENST00000409627 PRODH2Q9UF12 536 aa15.44■□□□□ 0.06
SUMO1-208ENST00000409627 BCAP29Q9UHQ4 241 aa15.44■□□□□ 0.06
SUMO1-208ENST00000409627 LEF1Q9UJU2 399 aaPredicted RBP15.44■□□□□ 0.06
SUMO1-208ENST00000409627 ERVK-11Q9UQG0 969 aa15.44■□□□□ 0.06
SUMO1-208ENST00000409627 ACACBO00763 2458 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 RFXANKO14593 260 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 ANGPT2O15123 496 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 SOAT1P35610 550 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 CDKN2CP42773 168 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 TRPC1P48995 793 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 CCT3P49368 545 aaKnown RBP15.43■□□□□ 0.06
SUMO1-208ENST00000409627 EMDP50402 254 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 RNF4P78317 190 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 EBPQ15125 230 aaKnown RBP15.43■□□□□ 0.06
SUMO1-208ENST00000409627 TBR1Q16650 682 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 ST3GAL2Q16842 350 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 FAM91A1Q658Y4 838 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 SLC2A7Q6PXP3 512 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 SLC29A4Q7RTT9 530 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 GPR155Q7Z3F1 870 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 ARMC10Q8N2F6 343 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 TRIML2Q8N7C3 387 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 NUP43Q8NFH3 380 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 OR56A1Q8NGH5 318 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 OR5L2Q8NGL0 311 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 C16orf52Q8NHV5 167 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 BRIX1Q8TDN6 353 aaKnown RBP15.43■□□□□ 0.06
SUMO1-208ENST00000409627 PSMF1Q92530 271 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 MAGED4Q96JG8 741 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 MS4A4EQ96PG1 132 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 INPP5KQ9BT40 448 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 ZCCHC3Q9NUD5 404 aaKnown RBP15.43■□□□□ 0.06
SUMO1-208ENST00000409627 VPS4AQ9UN37 437 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 NDUFAF1Q9Y375 327 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 HEMK1Q9Y5R4 338 aaPredicted RBP15.43■□□□□ 0.06
SUMO1-208ENST00000409627 SNX8Q9Y5X2 465 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 CELSR3Q9NYQ7 3312 aa15.43■□□□□ 0.06
SUMO1-208ENST00000409627 A0A096LPI6 279 aa15.42■□□□□ 0.06
SUMO1-208ENST00000409627 RNF103-CHMP3A0A140T963 221 aa15.42■□□□□ 0.06
SUMO1-208ENST00000409627 BBIP1A8MTZ0 92 aa15.42■□□□□ 0.06
SUMO1-208ENST00000409627 CAPN14A8MX76 684 aa15.42■□□□□ 0.06
SUMO1-208ENST00000409627 PRKNO60260 465 aaPredicted RBP15.42■□□□□ 0.06
SUMO1-208ENST00000409627 DNAJB5O75953 348 aa15.42■□□□□ 0.06
SUMO1-208ENST00000409627 ZCCHC18P0CG32 403 aa15.42■□□□□ 0.06
SUMO1-208ENST00000409627 UQCRC2P22695 453 aa15.42■□□□□ 0.06
SUMO1-208ENST00000409627 CCL11P51671 97 aa15.42■□□□□ 0.06
SUMO1-208ENST00000409627 GAB1Q13480 694 aa15.42■□□□□ 0.06
SUMO1-208ENST00000409627 CYLC2Q14093 348 aaPredicted RBP15.42■□□□□ 0.06
SUMO1-208ENST00000409627 MYBPC3Q14896 1274 aa15.42■□□□□ 0.06
SUMO1-208ENST00000409627 SPDYE7PQ495Y7 208 aa15.42■□□□□ 0.06
SUMO1-208ENST00000409627 COQ5Q5HYK3 327 aa15.42■□□□□ 0.06
SUMO1-208ENST00000409627 PAGE3Q5JUK9 113 aa15.42■□□□□ 0.06
SUMO1-208ENST00000409627 C6orf10Q5SRN2 563 aa15.42■□□□□ 0.06
SUMO1-208ENST00000409627 BHLHB9Q6PI77 547 aa15.42■□□□□ 0.06
SUMO1-208ENST00000409627 SNX32Q86XE0 403 aa15.42■□□□□ 0.06
SUMO1-208ENST00000409627 TREML1Q86YW5 311 aa15.42■□□□□ 0.06
SUMO1-208ENST00000409627 LGI4Q8N135 537 aa15.42■□□□□ 0.06
SUMO1-208ENST00000409627 DPP10Q8N608 796 aa15.42■□□□□ 0.06
SUMO1-208ENST00000409627 SLC5A8Q8N695 610 aa15.42■□□□□ 0.06
SUMO1-208ENST00000409627 C17orf47Q8NEP4 570 aa15.42■□□□□ 0.06
SUMO1-208ENST00000409627 DNAJB8Q8NHS0 232 aa15.42■□□□□ 0.06
SUMO1-208ENST00000409627 RP9Q8TA86 221 aaKnown RBP15.42■□□□□ 0.06
SUMO1-208ENST00000409627 CRELD1Q96HD1 420 aa15.42■□□□□ 0.06
SUMO1-208ENST00000409627 PHF12Q96QT6 1004 aa15.42■□□□□ 0.06
SUMO1-208ENST00000409627 WWTR1Q9GZV5 400 aa15.42■□□□□ 0.06
SUMO1-208ENST00000409627 MAP1BP46821 2468 aaKnown RBP15.41■□□□□ 0.06
SUMO1-208ENST00000409627 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.41■□□□□ 0.06
SUMO1-208ENST00000409627 C2orf92A0A1B0GVN3 265 aa15.41■□□□□ 0.06
SUMO1-208ENST00000409627 TMEM200CA6NKL6 621 aa15.41■□□□□ 0.06
SUMO1-208ENST00000409627 ERN1O75460 977 aaKnown RBP15.41■□□□□ 0.06
SUMO1-208ENST00000409627 HOXB9P17482 250 aaPredicted RBP15.41■□□□□ 0.06
SUMO1-208ENST00000409627 PRDX6P30041 224 aa15.41■□□□□ 0.06
SUMO1-208ENST00000409627 SOX11P35716 441 aa15.41■□□□□ 0.06
SUMO1-208ENST00000409627 STX5Q13190 355 aa15.41■□□□□ 0.06
SUMO1-208ENST00000409627 CRB2Q5IJ48 1285 aa15.41■□□□□ 0.06
SUMO1-208ENST00000409627 LRIF1Q5T3J3 769 aa15.41■□□□□ 0.06
SUMO1-208ENST00000409627 DNAJC14Q6Y2X3 702 aaPredicted RBP15.41■□□□□ 0.06
SUMO1-208ENST00000409627 SZRD1Q7Z422 152 aa15.41■□□□□ 0.06
SUMO1-208ENST00000409627 RETREG3Q86VR2 466 aa15.41■□□□□ 0.06
SUMO1-208ENST00000409627 SIRT6Q8N6T7 355 aa15.41■□□□□ 0.06
SUMO1-208ENST00000409627 ZNF441Q8N8Z8 693 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms