RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 ZNF615Q8N8J6 731 aa30.96■■■□□ 2.55
CSNK1E-204ENST00000403904 OR7G1Q8NGA0 311 aa30.96■■■□□ 2.55
CSNK1E-204ENST00000403904 SEMA4CQ9C0C4 833 aa30.96■■■□□ 2.55
CSNK1E-204ENST00000403904 PAIP1Q9H074 479 aaKnown RBP30.96■■■□□ 2.55
CSNK1E-204ENST00000403904 C3orf14Q9HBI5 128 aa30.96■■■□□ 2.55
CSNK1E-204ENST00000403904 ZCCHC3Q9NUD5 404 aaKnown RBP30.96■■■□□ 2.55
CSNK1E-204ENST00000403904 MAP10Q9P2G4 905 aa30.96■■■□□ 2.55
CSNK1E-204ENST00000403904 VPS4AQ9UN37 437 aa30.96■■■□□ 2.55
CSNK1E-204ENST00000403904 ZZEF1O43149 2961 aa30.95■■■□□ 2.55
CSNK1E-204ENST00000403904 EMC8O43402 210 aa30.95■■■□□ 2.54
CSNK1E-204ENST00000403904 ICAM2P13598 275 aa30.95■■■□□ 2.54
CSNK1E-204ENST00000403904 PTPN6P29350 595 aa30.95■■■□□ 2.54
CSNK1E-204ENST00000403904 TRPC1P48995 793 aa30.95■■■□□ 2.54
CSNK1E-204ENST00000403904 FOXK2Q01167 660 aa30.95■■■□□ 2.54
CSNK1E-204ENST00000403904 CHAF1BQ13112 559 aa30.95■■■□□ 2.54
CSNK1E-204ENST00000403904 RNF111Q6ZNA4 994 aa30.95■■■□□ 2.54
CSNK1E-204ENST00000403904 TMEM102Q8N9M5 508 aaPredicted RBP30.95■■■□□ 2.54
CSNK1E-204ENST00000403904 ELP5Q8TE02 316 aa30.95■■■□□ 2.54
CSNK1E-204ENST00000403904 MMP25Q9NPA2 562 aa30.95■■■□□ 2.54
CSNK1E-204ENST00000403904 BBIP1A8MTZ0 92 aa30.94■■■□□ 2.54
CSNK1E-204ENST00000403904 K7ENP7 123 aa30.94■■■□□ 2.54
CSNK1E-204ENST00000403904 PRDX6P30041 224 aa30.94■■■□□ 2.54
CSNK1E-204ENST00000403904 CLCN2P51788 898 aa30.94■■■□□ 2.54
CSNK1E-204ENST00000403904 UCNP55089 124 aa30.94■■■□□ 2.54
CSNK1E-204ENST00000403904 TMPRSS3P57727 454 aa30.94■■■□□ 2.54
CSNK1E-204ENST00000403904 GTDC1Q4AE62 458 aa30.94■■■□□ 2.54
CSNK1E-204ENST00000403904 INO80CQ6PI98 192 aaPredicted RBP30.94■■■□□ 2.54
CSNK1E-204ENST00000403904 TMEM64Q6YI46 380 aa30.94■■■□□ 2.54
CSNK1E-204ENST00000403904 DPP10Q8N608 796 aa30.94■■■□□ 2.54
CSNK1E-204ENST00000403904 NUP43Q8NFH3 380 aa30.94■■■□□ 2.54
CSNK1E-204ENST00000403904 RCN3Q96D15 328 aa30.94■■■□□ 2.54
CSNK1E-204ENST00000403904 ATP13A2Q9NQ11 1180 aa30.94■■■□□ 2.54
CSNK1E-204ENST00000403904 MGAQ8IWI9 3026 aa30.94■■■□□ 2.54
CSNK1E-204ENST00000403904 A0A096LPI6 279 aa30.93■■■□□ 2.54
CSNK1E-204ENST00000403904 TRBV11-1A0A0K0K1C0 115 aa30.93■■■□□ 2.54
CSNK1E-204ENST00000403904 KCNH1O95259 989 aa30.93■■■□□ 2.54
CSNK1E-204ENST00000403904 IFI6P09912 130 aa30.93■■■□□ 2.54
CSNK1E-204ENST00000403904 UQCRC2P22695 453 aa30.93■■■□□ 2.54
CSNK1E-204ENST00000403904 PRR5P85299 388 aa30.93■■■□□ 2.54
CSNK1E-204ENST00000403904 CLEC1AQ8NC01 280 aa30.93■■■□□ 2.54
CSNK1E-204ENST00000403904 C16orf52Q8NHV5 167 aa30.93■■■□□ 2.54
CSNK1E-204ENST00000403904 IL1RL2Q9HB29 575 aa30.93■■■□□ 2.54
CSNK1E-204ENST00000403904 NTMQ9P121 344 aa30.93■■■□□ 2.54
CSNK1E-204ENST00000403904 PCDHB14Q9Y5E9 798 aa30.93■■■□□ 2.54
CSNK1E-204ENST00000403904 DOCK10Q96BY6 2186 aa30.93■■■□□ 2.54
CSNK1E-204ENST00000403904 RNF103-CHMP3A0A140T963 221 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 MRASO14807 208 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 PRAMEF2O60811 474 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 BCAS2O75934 225 aaPredicted RBP30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 C1QCP02747 245 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 EMDP50402 254 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 RRADP55042 308 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 AIMP2Q13155 320 aaKnown RBP30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 TP53BP2Q13625 1128 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 COQ5Q5HYK3 327 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 KBTBD2Q8IY47 623 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 TRIML2Q8N7C3 387 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 SLC35A5Q9BS91 424 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 ING2Q9H160 280 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 PRKNO60260 465 aaPredicted RBP30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 SERPINA7P05543 415 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 ITGAMP11215 1152 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 VAC14Q08AM6 782 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 NFYCQ13952 458 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 KRT72Q14CN4 511 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 LRIF1Q5T3J3 769 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 DLEU7Q6UYE1 221 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 HSDL2Q6YN16 418 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 C9orf40Q8IXQ3 194 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 SFXN5Q8TD22 340 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 PHF12Q96QT6 1004 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 EQTNQ9NQ60 294 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 TAGLN3Q9UI15 199 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 DTX4Q9Y2E6 619 aa30.92■■■□□ 2.54
CSNK1E-204ENST00000403904 ACACBO00763 2458 aa30.91■■■□□ 2.54
CSNK1E-204ENST00000403904 PTPRQQ9UMZ3 2332 aa30.91■■■□□ 2.54
CSNK1E-204ENST00000403904 AIM2O14862 343 aa30.91■■■□□ 2.54
CSNK1E-204ENST00000403904 ERN1O75460 977 aaKnown RBP30.91■■■□□ 2.54
CSNK1E-204ENST00000403904 PSMG1O95456 288 aa30.91■■■□□ 2.54
CSNK1E-204ENST00000403904 CBX6O95503 412 aa30.91■■■□□ 2.54
CSNK1E-204ENST00000403904 ZCCHC18P0CG32 403 aa30.91■■■□□ 2.54
CSNK1E-204ENST00000403904 CPA2P48052 419 aa30.91■■■□□ 2.54
CSNK1E-204ENST00000403904 DHDDSQ86SQ9 333 aa30.91■■■□□ 2.54
CSNK1E-204ENST00000403904 MOAP1Q96BY2 351 aa30.91■■■□□ 2.54
CSNK1E-204ENST00000403904 THOC3Q96J01 351 aaKnown RBP30.91■■■□□ 2.54
CSNK1E-204ENST00000403904 SDAD1Q9NVU7 687 aaKnown RBP eCLIP30.91■■■□□ 2.542e-6■■□□□ 13.2
CSNK1E-204ENST00000403904 SLC25A37Q9NYZ2 338 aa30.91■■■□□ 2.54
CSNK1E-204ENST00000403904 HEMK1Q9Y5R4 338 aaPredicted RBP30.91■■■□□ 2.54
CSNK1E-204ENST00000403904 TPRP12270 2363 aaKnown RBP30.9■■■□□ 2.54
CSNK1E-204ENST00000403904 GIMAP1-GIMAP5A0A087WTJ2 511 aa30.9■■■□□ 2.54
CSNK1E-204ENST00000403904 COQ9O75208 318 aa30.9■■■□□ 2.54
CSNK1E-204ENST00000403904 HOXB9P17482 250 aaPredicted RBP30.9■■■□□ 2.54
CSNK1E-204ENST00000403904 RNF4P78317 190 aa30.9■■■□□ 2.54
CSNK1E-204ENST00000403904 C6orf120Q7Z4R8 191 aa30.9■■■□□ 2.54
CSNK1E-204ENST00000403904 MSRB3Q8IXL7 192 aa30.9■■■□□ 2.54
CSNK1E-204ENST00000403904 PCYOX1LQ8NBM8 494 aa30.9■■■□□ 2.54
CSNK1E-204ENST00000403904 OR56A1Q8NGH5 318 aa30.9■■■□□ 2.54
CSNK1E-204ENST00000403904 THAP3Q8WTV1 239 aaPredicted RBP30.9■■■□□ 2.54
CSNK1E-204ENST00000403904 GIMAP5Q96F15 307 aa30.9■■■□□ 2.54
CSNK1E-204ENST00000403904 AURKBQ96GD4 344 aaPredicted RBP30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms