RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 RAB8BQ92930 207 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 FOXJ1Q92949 421 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 THAP7Q9BT49 309 aaPredicted RBP16.17■□□□□ 0.18
PTPRA-205ENST00000399903 ZFYVE1Q9HBF4 777 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 KLHL1Q9NR64 748 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 MRPL15Q9P015 296 aaKnown RBP16.17■□□□□ 0.18
PTPRA-205ENST00000399903 ZFR2Q9UPR6 939 aaKnown RBP16.17■□□□□ 0.18
PTPRA-205ENST00000399903 A0A1W2PRU2 124 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 SCAMP2O15127 329 aaKnown RBP16.17■□□□□ 0.18
PTPRA-205ENST00000399903 HOXD4P09016 255 aaPredicted RBP16.17■□□□□ 0.18
PTPRA-205ENST00000399903 CD3GP09693 182 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 OSMP13725 252 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 BPIP17213 487 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 XPAP23025 273 aaPredicted RBP16.17■□□□□ 0.18
PTPRA-205ENST00000399903 GIFP27352 417 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 ARHGDIBP52566 201 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 NFATC2Q13469 925 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 GINS1Q14691 196 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 RAET1GQ6H3X3 334 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 UBE2Q1Q7Z7E8 422 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 MS4A15Q8N5U1 240 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 SAMD12Q8N8I0 201 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 FAM181AQ8N9Y4 354 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 HUS1BQ8NHY5 278 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 MS4A3Q96HJ5 214 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 SGK2Q9HBY8 427 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 SLC25A19Q9HC21 320 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 SEMA3GQ9NS98 782 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 BAIAP2Q9UQB8 552 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 MAB21L2Q9Y586 359 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 PLXNA3P51805 1871 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 ETHE1O95571 254 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 SOD2P04179 222 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 URODP06132 367 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 CR2P20023 1033 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 WNT4P56705 351 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 MTAPQ13126 283 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 DOC2AQ14183 400 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 NUMA1Q14980 2115 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 OR6M1Q8NGM8 313 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 UCN3Q969E3 161 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 RNFT2Q96EX2 444 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 SERHL2Q9H4I8 314 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 DNAJC11Q9NVH1 559 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 GPATCH2Q9NW75 528 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 PTGFRNQ9P2B2 879 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 PPM1BO75688 479 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 ACSM4P0C7M7 580 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 PTX3P26022 381 aaPredicted RBP16.16■□□□□ 0.18
PTPRA-205ENST00000399903 VIPR1P32241 457 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 CTSOP43234 321 aaPredicted RBP16.16■□□□□ 0.18
PTPRA-205ENST00000399903 CLCNKAP51800 687 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 SLC5A12Q1EHB4 618 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 ZNF385BQ569K4 471 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 GPR139Q6DWJ6 353 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 MZT2AQ6P582 158 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 TRILQ7L0X0 811 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 KIAA0907Q7Z7F0 614 aaPredicted RBP16.16■□□□□ 0.18
PTPRA-205ENST00000399903 OR8J1Q8NGP2 316 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 ADAMTS19Q8TE59 1207 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 RFT1Q96AA3 541 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 CREB3L1Q96BA8 519 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 ZNF558Q96NG5 402 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 RBP7Q96R05 134 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 LIN7BQ9HAP6 207 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 IL26Q9NPH9 171 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 GATBO75879 557 aaKnown RBP16.16■□□□□ 0.18
PTPRA-205ENST00000399903 KDM4BO94953 1096 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 XCR1P46094 333 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 LIM2P55344 173 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 TSPAN5P62079 268 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 RPS7P62081 194 aaKnown RBP16.16■□□□□ 0.18
PTPRA-205ENST00000399903 PLK5Q496M5 336 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 MEDAGQ5VYS4 303 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 KIAA1161Q6NSJ0 714 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 OLIG3Q7RTU3 272 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 HCFC1R1Q9NWW0 138 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 OR6C2Q9NZP2 312 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 CFAP97Q9P2B7 532 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 ADAM30Q9UKF2 790 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 INSL5Q9Y5Q6 135 aa16.16■□□□□ 0.18
PTPRA-205ENST00000399903 NME6O75414 186 aaPredicted RBP16.15■□□□□ 0.18
PTPRA-205ENST00000399903 F11P03951 625 aa16.15■□□□□ 0.18
PTPRA-205ENST00000399903 BCHEP06276 602 aa16.15■□□□□ 0.18
PTPRA-205ENST00000399903 CFL1P23528 166 aaKnown RBP16.15■□□□□ 0.18
PTPRA-205ENST00000399903 PIN1Q13526 163 aaPredicted RBP16.15■□□□□ 0.18
PTPRA-205ENST00000399903 CLVS2Q5SYC1 327 aa16.15■□□□□ 0.18
PTPRA-205ENST00000399903 C17orf107Q6ZR85 190 aa16.15■□□□□ 0.18
PTPRA-205ENST00000399903 GAREM2Q75VX8 874 aa16.15■□□□□ 0.18
PTPRA-205ENST00000399903 TMEM163Q8TC26 289 aa16.15■□□□□ 0.18
PTPRA-205ENST00000399903 ATF6BQ99941 703 aa16.15■□□□□ 0.18
PTPRA-205ENST00000399903 RUVBL1Q9Y265 456 aaKnown RBP16.15■□□□□ 0.18
PTPRA-205ENST00000399903 A0A0C4DFX4 3053 aa16.15■□□□□ 0.18
PTPRA-205ENST00000399903 GLYATL1P3A0A0U1RQE8 302 aa16.15■□□□□ 0.18
PTPRA-205ENST00000399903 SHISA3A0PJX4 238 aa16.15■□□□□ 0.18
PTPRA-205ENST00000399903 ANKDD1BA6NHY2 528 aa16.15■□□□□ 0.18
PTPRA-205ENST00000399903 ABLIM3O94929 683 aa16.15■□□□□ 0.18
PTPRA-205ENST00000399903 AOAHP28039 575 aa16.15■□□□□ 0.18
PTPRA-205ENST00000399903 HMGCLP35914 325 aa16.15■□□□□ 0.18
PTPRA-205ENST00000399903 CRB2Q5IJ48 1285 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms