RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 NUBPLQ8TB37 319 aa14.59□□□□□ -0.07
MBD1-207ENST00000398488 ACTRT2Q8TDY3 377 aa14.59□□□□□ -0.07
MBD1-207ENST00000398488 MTERF3Q96E29 417 aa14.59□□□□□ -0.07
MBD1-207ENST00000398488 UTP23Q9BRU9 249 aaKnown RBP14.59□□□□□ -0.07
MBD1-207ENST00000398488 ITPAQ9BY32 194 aa14.59□□□□□ -0.07
MBD1-207ENST00000398488 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.59□□□□□ -0.07
MBD1-207ENST00000398488 TRIM45Q9H8W5 580 aaPredicted RBP14.59□□□□□ -0.07
MBD1-207ENST00000398488 YARS2Q9Y2Z4 477 aaKnown RBP14.59□□□□□ -0.07
MBD1-207ENST00000398488 PCDHGA10Q9Y5H3 936 aa14.59□□□□□ -0.07
MBD1-207ENST00000398488 ZNF462Q96JM2 2506 aa14.59□□□□□ -0.07
MBD1-207ENST00000398488 PYCARD-AS1I3L0S3 204 aa14.58□□□□□ -0.08
MBD1-207ENST00000398488 UPK1AO00322 258 aa14.58□□□□□ -0.08
MBD1-207ENST00000398488 WISP2O76076 250 aa14.58□□□□□ -0.08
MBD1-207ENST00000398488 CD1EP15812 388 aa14.58□□□□□ -0.08
MBD1-207ENST00000398488 PRPS1L1P21108 318 aa14.58□□□□□ -0.08
MBD1-207ENST00000398488 NTSP30990 170 aa14.58□□□□□ -0.08
MBD1-207ENST00000398488 HPCAL1P37235 193 aa14.58□□□□□ -0.08
MBD1-207ENST00000398488 CASRP41180 1078 aa14.58□□□□□ -0.08
MBD1-207ENST00000398488 HLCSP50747 726 aa14.58□□□□□ -0.08
MBD1-207ENST00000398488 AQP5P55064 265 aa14.58□□□□□ -0.08
MBD1-207ENST00000398488 OC90Q02509 493 aaPredicted RBP14.58□□□□□ -0.08
MBD1-207ENST00000398488 ZNF169Q14929 603 aaPredicted RBP14.58□□□□□ -0.08
MBD1-207ENST00000398488 NNATQ16517 81 aa14.58□□□□□ -0.08
MBD1-207ENST00000398488 CGB2Q6NT52 195 aa14.58□□□□□ -0.08
MBD1-207ENST00000398488 LRRC34Q8IZ02 419 aa14.58□□□□□ -0.08
MBD1-207ENST00000398488 SAMD14Q8IZD0 417 aaPredicted RBP14.58□□□□□ -0.08
MBD1-207ENST00000398488 OR5L2Q8NGL0 311 aa14.58□□□□□ -0.08
MBD1-207ENST00000398488 ELP4Q96EB1 424 aa14.58□□□□□ -0.08
MBD1-207ENST00000398488 MAGED4Q96JG8 741 aa14.58□□□□□ -0.08
MBD1-207ENST00000398488 TRIM4Q9C037 500 aa14.58□□□□□ -0.08
MBD1-207ENST00000398488 NXF5Q9H1B4 397 aaKnown RBP14.58□□□□□ -0.08
MBD1-207ENST00000398488 SIRT3Q9NTG7 399 aaPredicted RBP14.58□□□□□ -0.08
MBD1-207ENST00000398488 LRFN1Q9P244 771 aa14.58□□□□□ -0.08
MBD1-207ENST00000398488 MAP10Q9P2G4 905 aa14.58□□□□□ -0.08
MBD1-207ENST00000398488 ANAPC2Q9UJX6 822 aa14.58□□□□□ -0.08
MBD1-207ENST00000398488 C2orf92A0A1B0GVN3 265 aa14.57□□□□□ -0.08
MBD1-207ENST00000398488 OR6C76A6NM76 312 aa14.57□□□□□ -0.08
MBD1-207ENST00000398488 PLOD3O60568 738 aa14.57□□□□□ -0.08
MBD1-207ENST00000398488 SCN2BO60939 215 aa14.57□□□□□ -0.08
MBD1-207ENST00000398488 ZFP36L2P47974 494 aaKnown RBP14.57□□□□□ -0.08
MBD1-207ENST00000398488 SSR4P51571 173 aa14.57□□□□□ -0.08
MBD1-207ENST00000398488 NR0B1P51843 470 aaKnown RBP14.57□□□□□ -0.08
MBD1-207ENST00000398488 SF3A3Q12874 501 aaKnown RBP eCLIP14.57□□□□□ -0.083e-8■■■■■ 54.4
MBD1-207ENST00000398488 TLR1Q15399 786 aa14.57□□□□□ -0.08
MBD1-207ENST00000398488 CPTPQ5TA50 214 aa14.57□□□□□ -0.08
MBD1-207ENST00000398488 DESI1Q6ICB0 168 aa14.57□□□□□ -0.08
MBD1-207ENST00000398488 OR4F3Q6IEY1 312 aa14.57□□□□□ -0.08
MBD1-207ENST00000398488 IL20RBQ6UXL0 311 aa14.57□□□□□ -0.08
MBD1-207ENST00000398488 SLC29A4Q7RTT9 530 aa14.57□□□□□ -0.08
MBD1-207ENST00000398488 R3HCC1LQ7Z5L2 792 aaKnown RBP14.57□□□□□ -0.08
MBD1-207ENST00000398488 SPATA19Q7Z5L4 167 aa14.57□□□□□ -0.08
MBD1-207ENST00000398488 WDR53Q7Z5U6 358 aaPredicted RBP14.57□□□□□ -0.08
MBD1-207ENST00000398488 PRR22Q8IZ63 422 aa14.57□□□□□ -0.08
MBD1-207ENST00000398488 CISD2Q8N5K1 135 aaKnown RBP14.57□□□□□ -0.08
MBD1-207ENST00000398488 TAAR6Q96RI8 345 aa14.57□□□□□ -0.08
MBD1-207ENST00000398488 KLHL1Q9NR64 748 aa14.57□□□□□ -0.08
MBD1-207ENST00000398488 PLOD2O00469 737 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 FCHO1O14526 889 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 PRAMEF2O60811 474 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 PSMG1O95456 288 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 CYB561P49447 251 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 CORO7P57737 925 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 PMP22Q01453 160 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 PGS1Q32NB8 556 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 ZNF791Q3KP31 576 aaPredicted RBP14.56□□□□□ -0.08
MBD1-207ENST00000398488 C6orf163Q5TEZ5 329 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 NPSR1Q6W5P4 371 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 PRICKLE2Q7Z3G6 844 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 CAMKMTQ7Z624 323 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 CLECL1Q8IZS7 167 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 OR2L13Q8N349 312 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 TMEM156Q8N614 296 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 ARFGAP2Q8N6H7 521 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 SCMH1Q96GD3 660 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 DPY30Q9C005 99 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 ACSS1Q9NUB1 689 aaPredicted RBP14.56□□□□□ -0.08
MBD1-207ENST00000398488 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.56□□□□□ -0.08
MBD1-207ENST00000398488 ABI3Q9P2A4 366 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 C19orf53Q9UNZ5 99 aaPredicted RBP14.56□□□□□ -0.08
MBD1-207ENST00000398488 HEMK1Q9Y5R4 338 aaPredicted RBP14.56□□□□□ -0.08
MBD1-207ENST00000398488 TRAV17A0A0B4J275 112 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 A0A1W2PRB8 838 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 E9PBE3 544 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 C6orf47O95873 294 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 C1QCP02747 245 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 SP1P08047 785 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 MDH1P40925 334 aaKnown RBP14.56□□□□□ -0.08
MBD1-207ENST00000398488 DGKQP52824 942 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 GYS2P54840 703 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 MANFP55145 182 aaKnown RBP14.56□□□□□ -0.08
MBD1-207ENST00000398488 C19orf57Q0VDD7 668 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 INPP5JQ15735 1006 aaPredicted RBP14.56□□□□□ -0.08
MBD1-207ENST00000398488 ZNF766Q5HY98 468 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 SPANXN4Q5MJ08 99 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 CEP70Q8NHQ1 597 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 ASB15Q8WXK1 588 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 SNRNP40Q96DI7 357 aaKnown RBP14.56□□□□□ -0.08
MBD1-207ENST00000398488 VSTM2LQ96N03 204 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 DUSP26Q9BV47 211 aa14.56□□□□□ -0.08
MBD1-207ENST00000398488 CLMPQ9H6B4 373 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms