RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 OR12D1P0DN82 309 aa19.08■□□□□ 0.64
VCPKMT-202ENST00000395860 ARAFP10398 606 aa19.08■□□□□ 0.64
VCPKMT-202ENST00000395860 TNNI3P19429 210 aa19.08■□□□□ 0.64
VCPKMT-202ENST00000395860 SIMC1Q8NDZ2 872 aa19.08■□□□□ 0.64
VCPKMT-202ENST00000395860 NFKBIDQ8NI38 313 aa19.08■□□□□ 0.64
VCPKMT-202ENST00000395860 MIPOL1Q8TD10 442 aa19.08■□□□□ 0.64
VCPKMT-202ENST00000395860 C16orf58Q96GQ5 468 aa19.08■□□□□ 0.64
VCPKMT-202ENST00000395860 LRFN5Q96NI6 719 aa19.08■□□□□ 0.64
VCPKMT-202ENST00000395860 ZPBPQ9BS86 351 aa19.08■□□□□ 0.64
VCPKMT-202ENST00000395860 ACTRT3Q9BYD9 372 aa19.08■□□□□ 0.64
VCPKMT-202ENST00000395860 VN1R1Q9GZP7 353 aa19.08■□□□□ 0.64
VCPKMT-202ENST00000395860 RNPEPL1Q9HAU8 725 aa19.08■□□□□ 0.64
VCPKMT-202ENST00000395860 ADAP2Q9NPF8 381 aa19.08■□□□□ 0.64
VCPKMT-202ENST00000395860 GALNSP34059 522 aa19.07■□□□□ 0.64
VCPKMT-202ENST00000395860 TXNL4AP83876 142 aaKnown RBP19.07■□□□□ 0.64
VCPKMT-202ENST00000395860 CDK6Q00534 326 aa19.07■□□□□ 0.64
VCPKMT-202ENST00000395860 EXOSC7Q15024 291 aaKnown RBP19.07■□□□□ 0.64
VCPKMT-202ENST00000395860 NSDHLQ15738 373 aa19.07■□□□□ 0.64
VCPKMT-202ENST00000395860 MLIPQ5VWP3 458 aa19.07■□□□□ 0.64
VCPKMT-202ENST00000395860 ZFP1Q6P2D0 407 aa19.07■□□□□ 0.64
VCPKMT-202ENST00000395860 SHISA6Q6ZSJ9 500 aa19.07■□□□□ 0.64
VCPKMT-202ENST00000395860 XAGE5Q8WWM1 108 aa19.07■□□□□ 0.64
VCPKMT-202ENST00000395860 ASPSCR1Q9BZE9 553 aa19.07■□□□□ 0.64
VCPKMT-202ENST00000395860 PNO1Q9NRX1 252 aaKnown RBP19.07■□□□□ 0.64
VCPKMT-202ENST00000395860 CUL9Q8IWT3 2517 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 TCRBV5S2A0A599 114 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 TMEM247A6NEH6 219 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 PLD2O14939 933 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 DKK1O94907 266 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 RECKO95980 971 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 CSRP1P21291 193 aaKnown RBP19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 ZNF267Q14586 743 aaPredicted RBP19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 LRRC23Q53EV4 343 aaPredicted RBP19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 LCN10Q6JVE6 187 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 MFSD12Q6NUT3 480 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 SLC30A8Q8IWU4 369 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 PLPP5Q8NEB5 264 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 OR52E4Q8NGH9 312 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 FBXO30Q8TB52 745 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 MR1Q95460 341 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 FKBP10Q96AY3 582 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 OTUB1Q96FW1 271 aaPredicted RBP19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 OR7D2Q96RA2 312 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 DDA1Q9BW61 102 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 SOX17Q9H6I2 414 aaPredicted RBP19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 A4GALTQ9NPC4 353 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 GPN3Q9UHW5 284 aaPredicted RBP19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 ANGPT4Q9Y264 503 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 EP300Q09472 2414 aaPredicted RBP19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 TCRBV16S1A1N1A0A5B0 115 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 DHRS12A0PJE2 317 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 PMS2P1A4D2B8 440 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 C5orf58C9J3I9 102 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 COQ9O75208 318 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 NME6O75414 186 aaPredicted RBP19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 ALBP02768 609 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 BCHEP06276 602 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 PSMA4P25789 261 aaKnown RBP19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 PGDP52209 483 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 EFNA3P52797 238 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 NHLH1Q02575 133 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 NKG7Q16617 165 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 INTS11Q5TA45 600 aaKnown RBP19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 CDC73Q6P1J9 531 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 SLC44A2Q8IWA5 706 aaPredicted RBP19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 LGI4Q8N135 537 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 GOLM1Q8NBJ4 401 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 OR52R1Q8NGF1 315 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 ADAMTS15Q8TE58 950 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 CANT1Q8WVQ1 401 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 ZNF578Q96N58 590 aaPredicted RBP19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 CNPPD1Q9BV87 410 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 AKIRIN1Q9H9L7 192 aaPredicted RBP19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 P2RX2Q9UBL9 471 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 ZNF639Q9UID6 485 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 V9GYQ6 96 aa19.06■□□□□ 0.64
VCPKMT-202ENST00000395860 SYNDIG1LA6NDD5 238 aa19.05■□□□□ 0.64
VCPKMT-202ENST00000395860 VSTM2BA6NLU5 285 aa19.05■□□□□ 0.64
VCPKMT-202ENST00000395860 C17orf105B2RV13 164 aa19.05■□□□□ 0.64
VCPKMT-202ENST00000395860 DYRK3O43781 588 aa19.05■□□□□ 0.64
VCPKMT-202ENST00000395860 CBX7O95931 251 aa19.05■□□□□ 0.64
VCPKMT-202ENST00000395860 SERPINA1P01009 418 aa19.05■□□□□ 0.64
VCPKMT-202ENST00000395860 HEXBP07686 556 aa19.05■□□□□ 0.64
VCPKMT-202ENST00000395860 UMPSP11172 480 aa19.05■□□□□ 0.64
VCPKMT-202ENST00000395860 AQP1P29972 269 aa19.05■□□□□ 0.64
VCPKMT-202ENST00000395860 KDELR2P33947 212 aa19.05■□□□□ 0.64
VCPKMT-202ENST00000395860 EEF1A2Q05639 463 aaKnown RBP19.05■□□□□ 0.64
VCPKMT-202ENST00000395860 SNCBQ16143 134 aa19.05■□□□□ 0.64
VCPKMT-202ENST00000395860 C3orf38Q5JPI3 329 aa19.05■□□□□ 0.64
VCPKMT-202ENST00000395860 TMEM151BQ8IW70 566 aa19.05■□□□□ 0.64
VCPKMT-202ENST00000395860 ENDOVQ8N8Q3 282 aaKnown RBP19.05■□□□□ 0.64
VCPKMT-202ENST00000395860 GALNT6Q8NCL4 622 aa19.05■□□□□ 0.64
VCPKMT-202ENST00000395860 WDR36Q8NI36 951 aaKnown RBP19.05■□□□□ 0.64
VCPKMT-202ENST00000395860 SLC38A5Q8WUX1 472 aa19.05■□□□□ 0.64
VCPKMT-202ENST00000395860 DUS3LQ96G46 650 aaKnown RBP19.05■□□□□ 0.64
VCPKMT-202ENST00000395860 SLC26A1Q9H2B4 701 aa19.05■□□□□ 0.64
VCPKMT-202ENST00000395860 DCAF13Q9NV06 445 aaKnown RBP19.05■□□□□ 0.64
VCPKMT-202ENST00000395860 NKX1-2Q9UD57 310 aaPredicted RBP19.05■□□□□ 0.64
VCPKMT-202ENST00000395860 AURKCQ9UQB9 309 aa19.05■□□□□ 0.64
VCPKMT-202ENST00000395860 ERVK-19Q9WJR5 959 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms