RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 FOXJ1Q92949 421 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 SLC25A46Q96AG3 418 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 RTP4Q96DX8 246 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 CCDC74BQ96LY2 380 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 NXF2Q9GZY0 626 aaKnown RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 POT1Q9NUX5 634 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 SLC27A6Q9Y2P4 619 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 SHANK3Q9BYB0 1731 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 NRAPQ86VF7 1730 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 GNG14A0A1W2PPG7 69 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 FAM170BA6NMN3 283 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 I6L893 689 aaPredicted RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 TNFRSF10BO14763 440 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 ADAMTS4O75173 837 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 LRATO95237 230 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 PNPP00491 289 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 ANXA5P08758 320 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 NMBP08949 121 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 AKR1A1P14550 325 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 CPT2P23786 658 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 ITGA3P26006 1051 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 HOXC13P31276 330 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 DLX5P56178 289 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 SEC61A1P61619 476 aaKnown RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 SH3BP2P78314 561 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 OC90Q02509 493 aaPredicted RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 MAP2K5Q13163 448 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 HEPACAMQ14CZ8 416 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 PTPRRQ15256 657 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 RBMS2Q15434 407 aaKnown RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 TAF13Q15543 124 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 MPEG1Q2M385 716 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 TEX30Q5JUR7 227 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 C6orf136Q5SQH8 315 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 ADNP2Q6IQ32 1131 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 RGMBQ6NW40 437 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 LYPD4Q6UWN0 246 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 KIAA0907Q7Z7F0 614 aaPredicted RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 ACVR1CQ8NER5 493 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 OR1J4Q8NGS1 313 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 NETO1Q8TDF5 533 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 ACOT12Q8WYK0 555 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 EMID1Q96A84 441 aaPredicted RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 TSSK3Q96PN8 268 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 PEBP4Q96S96 227 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 ALX4Q9H161 411 aaPredicted RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 SLC25A32Q9H2D1 315 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 SEMA3GQ9NS98 782 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 TXNL4BQ9NX01 149 aaKnown RBP7.27□□□□□ -1.25
VTI1A-201ENST00000393077 RPS6KB2Q9UBS0 482 aa7.27□□□□□ -1.25
VTI1A-201ENST00000393077 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.26□□□□□ -1.25
VTI1A-201ENST00000393077 OR6C68A6NDL8 312 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 MPTX1A8MV57 137 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 ARPC1BO15143 372 aaKnown RBP7.26□□□□□ -1.25
VTI1A-201ENST00000393077 OR10H2O60403 315 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 FMO6PO60774 539 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 MED6O75586 246 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 LATS1O95835 1130 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 SCG5P05408 212 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 SMIM10L2AP0DMW4 78 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 SMIM10L2BP0DMW5 78 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 NDUFB7P17568 137 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 SLC19A1P41440 591 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 MAT1AQ00266 395 aaKnown RBP7.26□□□□□ -1.25
VTI1A-201ENST00000393077 GANABQ14697 944 aaKnown RBP7.26□□□□□ -1.25
VTI1A-201ENST00000393077 FAM110CQ1W6H9 321 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 FBXO47Q5MNV8 452 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 SZRD1Q7Z422 152 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 TMEM135Q86UB9 458 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 ZFAND4Q86XD8 727 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 NRROSQ86YC3 692 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 CCDC117Q8IWD4 279 aaPredicted RBP7.26□□□□□ -1.25
VTI1A-201ENST00000393077 TERB2Q8NHR7 220 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 CD300LFQ8TDQ1 290 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 PAQR8Q8TEZ7 354 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 ARNTL2Q8WYA1 636 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 GTF3AQ92664 365 aaKnown RBP7.26□□□□□ -1.25
VTI1A-201ENST00000393077 ESAMQ96AP7 390 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 OPN3Q9H1Y3 402 aaPredicted RBP7.26□□□□□ -1.25
VTI1A-201ENST00000393077 BCO1Q9HAY6 547 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 SEC14L3Q9UDX4 400 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 NDRG4Q9ULP0 352 aaKnown RBP7.26□□□□□ -1.25
VTI1A-201ENST00000393077 GOLT1BQ9Y3E0 138 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 CITO14578 2027 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 C2CD4BA6NLJ0 364 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 GFRA2O00451 464 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 PHOX2AO14813 284 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 MPC2O95563 127 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 F9P00740 461 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 CXCL3P19876 107 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 ANXA7P20073 488 aaKnown RBP7.26□□□□□ -1.25
VTI1A-201ENST00000393077 PTBP1P26599 531 aaKnown RBP eCLIP7.26□□□□□ -1.256e-7■■■■■ 34
VTI1A-201ENST00000393077 ARL2P36404 184 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 ATP5C1P36542 298 aaKnown RBP7.26□□□□□ -1.25
VTI1A-201ENST00000393077 OR1G1P47890 313 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 CLCN7P51798 805 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 EIF5AP63241 154 aaKnown RBP7.26□□□□□ -1.25
VTI1A-201ENST00000393077 CAP1Q01518 475 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 ZNF33AQ06730 810 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 P2RY14Q15391 338 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms