RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 SUV39H1O43463 412 aa18.36■□□□□ 0.53
CCM2-202ENST00000381112 CBFA2T3O75081 653 aa18.36■□□□□ 0.53
CCM2-202ENST00000381112 NME6O75414 186 aaPredicted RBP18.36■□□□□ 0.53
CCM2-202ENST00000381112 LDLRP01130 860 aa18.36■□□□□ 0.53
CCM2-202ENST00000381112 CSTF2P33240 577 aaKnown RBP eCLIP18.36■□□□□ 0.53
CCM2-202ENST00000381112 PDX1P52945 283 aa18.36■□□□□ 0.53
CCM2-202ENST00000381112 GRAMD1BQ3KR37 738 aa18.36■□□□□ 0.53
CCM2-202ENST00000381112 PWWP2BQ6NUJ5 590 aa18.36■□□□□ 0.53
CCM2-202ENST00000381112 PATL1Q86TB9 770 aaKnown RBP18.36■□□□□ 0.53
CCM2-202ENST00000381112 SLC44A2Q8IWA5 706 aaPredicted RBP18.36■□□□□ 0.53
CCM2-202ENST00000381112 HSH2DQ96JZ2 352 aa18.36■□□□□ 0.53
CCM2-202ENST00000381112 CXorf21Q9HAI6 301 aa18.36■□□□□ 0.53
CCM2-202ENST00000381112 TMEM9BQ9NQ34 198 aa18.36■□□□□ 0.53
CCM2-202ENST00000381112 NECTIN3Q9NQS3 549 aa18.36■□□□□ 0.53
CCM2-202ENST00000381112 OCIAD1Q9NX40 245 aa18.36■□□□□ 0.53
CCM2-202ENST00000381112 MMACHCQ9Y4U1 282 aa18.36■□□□□ 0.53
CCM2-202ENST00000381112 LRRC42Q9Y546 428 aa18.36■□□□□ 0.53
CCM2-202ENST00000381112 TMEM247A6NEH6 219 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 CLOCKO15516 846 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 SLC28A2O43868 658 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 ATXN8OSP0DMR3 200 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 MAGEA2P43356 314 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 STT3AP46977 705 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 MAPK10P53779 464 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 SELENOWP63302 87 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 FUT5Q11128 374 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 SYPL1Q16563 259 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 RPS26P11Q5JNZ5 115 aaPredicted RBP18.35■□□□□ 0.53
CCM2-202ENST00000381112 ARHGAP40Q5TG30 622 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 CDC73Q6P1J9 531 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 SLC38A9Q8NBW4 561 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 RBM18Q96H35 190 aaKnown RBP18.35■□□□□ 0.53
CCM2-202ENST00000381112 DOHHQ9BU89 302 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 SEMA4GQ9NTN9 838 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 ZNF639Q9UID6 485 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 KCNE3Q9Y6H6 103 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 SCRG1O75711 98 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 IFNA14P01570 189 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 OPN1SWP03999 348 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 SERTAD2Q14140 314 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.35■□□□□ 0.53
CCM2-202ENST00000381112 EXOSC6Q5RKV6 272 aaKnown RBP18.35■□□□□ 0.53
CCM2-202ENST00000381112 IZUMO2Q6UXV1 221 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 BPHLQ86WA6 291 aaPredicted RBP18.35■□□□□ 0.53
CCM2-202ENST00000381112 GALNT12Q8IXK2 581 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 VWA5B2Q8N398 1253 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 BMPERQ8N8U9 685 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 AGBL5Q8NDL9 886 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 CATSPER1Q8NEC5 780 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 PRSS33Q8NF86 280 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 RIT1Q92963 219 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 TPD52L3Q96J77 140 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 DGAT2Q96PD7 388 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 TREX2Q9BQ50 279 aaPredicted RBP18.35■□□□□ 0.53
CCM2-202ENST00000381112 COL25A1Q9BXS0 654 aaPredicted RBP18.35■□□□□ 0.53
CCM2-202ENST00000381112 IL1RAPQ9NPH3 570 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 SLC22A11Q9NSA0 550 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 C15orf41Q9Y2V0 281 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 DTNAQ9Y4J8 743 aa18.35■□□□□ 0.53
CCM2-202ENST00000381112 EFCAB7A8K855 629 aa18.34■□□□□ 0.53
CCM2-202ENST00000381112 DEAF1O75398 565 aaPredicted RBP18.34■□□□□ 0.53
CCM2-202ENST00000381112 PRSS23O95084 383 aa18.34■□□□□ 0.53
CCM2-202ENST00000381112 CBX7O95931 251 aa18.34■□□□□ 0.53
CCM2-202ENST00000381112 NR2F1P10589 423 aa18.34■□□□□ 0.53
CCM2-202ENST00000381112 FGF5P12034 268 aa18.34■□□□□ 0.53
CCM2-202ENST00000381112 S1PR1P21453 382 aa18.34■□□□□ 0.53
CCM2-202ENST00000381112 BIKQ13323 160 aa18.34■□□□□ 0.53
CCM2-202ENST00000381112 IL11RAQ14626 422 aa18.34■□□□□ 0.53
CCM2-202ENST00000381112 FKBP9P1Q75LS8 142 aa18.34■□□□□ 0.53
CCM2-202ENST00000381112 PPP1R3BQ86XI6 285 aa18.34■□□□□ 0.53
CCM2-202ENST00000381112 SLC16A11Q8NCK7 471 aa18.34■□□□□ 0.53
CCM2-202ENST00000381112 DNAJC9Q8WXX5 260 aa18.34■□□□□ 0.53
CCM2-202ENST00000381112 EME1Q96AY2 570 aa18.34■□□□□ 0.53
CCM2-202ENST00000381112 ZNF184Q99676 751 aaPredicted RBP18.34■□□□□ 0.53
CCM2-202ENST00000381112 SLC7A5P2Q9GIP4 190 aa18.34■□□□□ 0.53
CCM2-202ENST00000381112 NTN4Q9HB63 628 aa18.34■□□□□ 0.53
CCM2-202ENST00000381112 BCL2L10Q9HD36 194 aa18.34■□□□□ 0.53
CCM2-202ENST00000381112 APMAPQ9HDC9 416 aa18.34■□□□□ 0.53
CCM2-202ENST00000381112 ADAP2Q9NPF8 381 aa18.34■□□□□ 0.53
CCM2-202ENST00000381112 DUXAA6NLW8 204 aa18.33■□□□□ 0.53
CCM2-202ENST00000381112 CHRM4P08173 479 aa18.33■□□□□ 0.53
CCM2-202ENST00000381112 KCNJ10P78508 379 aa18.33■□□□□ 0.53
CCM2-202ENST00000381112 GNA13Q14344 377 aa18.33■□□□□ 0.53
CCM2-202ENST00000381112 EXOSC7Q15024 291 aaKnown RBP18.33■□□□□ 0.53
CCM2-202ENST00000381112 SFT2D3Q587I9 215 aa18.33■□□□□ 0.53
CCM2-202ENST00000381112 QSOX2Q6ZRP7 698 aa18.33■□□□□ 0.53
CCM2-202ENST00000381112 COX15Q7KZN9 410 aa18.33■□□□□ 0.53
CCM2-202ENST00000381112 WDR53Q7Z5U6 358 aaPredicted RBP18.33■□□□□ 0.53
CCM2-202ENST00000381112 ZDHHC21Q8IVQ6 265 aa18.33■□□□□ 0.53
CCM2-202ENST00000381112 ICA1LQ8NDH6 482 aa18.33■□□□□ 0.53
CCM2-202ENST00000381112 ADAMTS15Q8TE58 950 aa18.33■□□□□ 0.53
CCM2-202ENST00000381112 SLC35A4Q96G79 324 aa18.33■□□□□ 0.53
CCM2-202ENST00000381112 PTCHD1Q96NR3 888 aa18.33■□□□□ 0.53
CCM2-202ENST00000381112 BDH2Q9BUT1 245 aa18.33■□□□□ 0.53
CCM2-202ENST00000381112 RUBCNLQ9H714 662 aa18.33■□□□□ 0.53
CCM2-202ENST00000381112 MKKSQ9NPJ1 570 aaPredicted RBP18.33■□□□□ 0.53
CCM2-202ENST00000381112 LIPT1Q9Y234 373 aa18.33■□□□□ 0.53
CCM2-202ENST00000381112 SPEGQ15772 3267 aa18.33■□□□□ 0.52
CCM2-202ENST00000381112 IGKV3D-11A0A0A0MRZ8 115 aa18.33■□□□□ 0.52
CCM2-202ENST00000381112 PDE9AO76083 593 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms