RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 DUSP3P51452 185 aaPredicted RBP12.71□□□□□ -0.37
HIPK3-202ENST00000379016 ABHD17BQ5VST6 288 aa12.71□□□□□ -0.37
HIPK3-202ENST00000379016 USP53Q70EK8 1073 aa12.71□□□□□ -0.37
HIPK3-202ENST00000379016 GLB1L3Q8NCI6 653 aaPredicted RBP12.71□□□□□ -0.37
HIPK3-202ENST00000379016 LHX5Q9H2C1 402 aa12.71□□□□□ -0.37
HIPK3-202ENST00000379016 SLC2A4RGQ9NR83 387 aa12.71□□□□□ -0.37
HIPK3-202ENST00000379016 ACSL6Q9UKU0 697 aa12.71□□□□□ -0.37
HIPK3-202ENST00000379016 MT-ND2P03891 347 aa12.71□□□□□ -0.37
HIPK3-202ENST00000379016 FAM163BP0C2L3 166 aa12.71□□□□□ -0.37
HIPK3-202ENST00000379016 CD1CP29017 333 aa12.71□□□□□ -0.37
HIPK3-202ENST00000379016 GNB2P62879 340 aa12.71□□□□□ -0.37
HIPK3-202ENST00000379016 TIGD5Q53EQ6 642 aa12.71□□□□□ -0.37
HIPK3-202ENST00000379016 DBX2Q6ZNG2 339 aa12.71□□□□□ -0.37
HIPK3-202ENST00000379016 TUSC5Q8IXB3 177 aa12.71□□□□□ -0.37
HIPK3-202ENST00000379016 OR1E3Q8WZA6 343 aa12.71□□□□□ -0.37
HIPK3-202ENST00000379016 RAB8BQ92930 207 aa12.71□□□□□ -0.37
HIPK3-202ENST00000379016 G6PC3Q9BUM1 346 aa12.71□□□□□ -0.37
HIPK3-202ENST00000379016 BCO2Q9BYV7 579 aa12.71□□□□□ -0.37
HIPK3-202ENST00000379016 IKZF4Q9H2S9 585 aa12.71□□□□□ -0.37
HIPK3-202ENST00000379016 MEPEQ9NQ76 525 aaPredicted RBP12.71□□□□□ -0.37
HIPK3-202ENST00000379016 LOC105369274A0A096LPK9 316 aa12.71□□□□□ -0.38
HIPK3-202ENST00000379016 LAMTOR5O43504 91 aa12.71□□□□□ -0.38
HIPK3-202ENST00000379016 ADRB2P07550 413 aa12.71□□□□□ -0.38
HIPK3-202ENST00000379016 OR12D1P0DN82 309 aa12.71□□□□□ -0.38
HIPK3-202ENST00000379016 LIPCP11150 499 aa12.71□□□□□ -0.38
HIPK3-202ENST00000379016 INHBEP58166 350 aa12.71□□□□□ -0.38
HIPK3-202ENST00000379016 LIN52Q52LA3 116 aa12.71□□□□□ -0.38
HIPK3-202ENST00000379016 KCTD20Q7Z5Y7 419 aa12.71□□□□□ -0.38
HIPK3-202ENST00000379016 OR4N4Q8N0Y3 316 aa12.71□□□□□ -0.38
HIPK3-202ENST00000379016 GIMAP1Q8WWP7 306 aa12.71□□□□□ -0.38
HIPK3-202ENST00000379016 ZNF566Q969W8 418 aa12.71□□□□□ -0.38
HIPK3-202ENST00000379016 NIPSNAP2O75323 286 aa12.71□□□□□ -0.38
HIPK3-202ENST00000379016 KCNK5O95279 499 aa12.71□□□□□ -0.38
HIPK3-202ENST00000379016 OXSR1O95747 527 aaPredicted RBP12.71□□□□□ -0.38
HIPK3-202ENST00000379016 IL7P13232 177 aa12.71□□□□□ -0.38
HIPK3-202ENST00000379016 PTGER3P43115 390 aa12.71□□□□□ -0.38
HIPK3-202ENST00000379016 MEOX1P50221 254 aa12.71□□□□□ -0.38
HIPK3-202ENST00000379016 SCCPDHQ8NBX0 429 aa12.71□□□□□ -0.38
HIPK3-202ENST00000379016 OR52E2Q8NGJ4 325 aa12.71□□□□□ -0.38
HIPK3-202ENST00000379016 SLC5A11Q8WWX8 675 aa12.71□□□□□ -0.38
HIPK3-202ENST00000379016 DDIT4LQ96D03 193 aa12.71□□□□□ -0.38
HIPK3-202ENST00000379016 PYURFQ96I23 114 aa12.71□□□□□ -0.38
HIPK3-202ENST00000379016 FUBP3Q96I24 572 aaKnown RBP eCLIP12.71□□□□□ -0.381e-7■■■■■ 27.2
HIPK3-202ENST00000379016 OR5B2Q96R09 309 aa12.71□□□□□ -0.38
HIPK3-202ENST00000379016 ATF6BQ99941 703 aa12.71□□□□□ -0.38
HIPK3-202ENST00000379016 ZNF436Q9C0F3 470 aaPredicted RBP12.71□□□□□ -0.38
HIPK3-202ENST00000379016 GPR34Q9UPC5 381 aa12.71□□□□□ -0.38
HIPK3-202ENST00000379016 TMED5Q9Y3A6 229 aa12.71□□□□□ -0.38
HIPK3-202ENST00000379016 IL32P24001 234 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 CCNHP51946 323 aaPredicted RBP12.7□□□□□ -0.38
HIPK3-202ENST00000379016 KLHDC10Q6PID8 442 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 RNF128Q8TEB7 428 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 C14orf119Q9NWQ9 140 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 USP36Q9P275 1121 aaKnown RBP12.7□□□□□ -0.38
HIPK3-202ENST00000379016 HSFX1Q9UBD0 423 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 DNMT1P26358 1616 aaKnown RBP12.7□□□□□ -0.38
HIPK3-202ENST00000379016 SYT7O43581 403 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 OR2B3O76000 313 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 DUOXA1Q1HG43 343 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 MAMDC2Q7Z304 686 aaPredicted RBP12.7□□□□□ -0.38
HIPK3-202ENST00000379016 CSPG4P5Q96PW8 444 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 ACKR4Q9NPB9 350 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 GFOD1Q9NXC2 390 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 ACTL7AQ9Y615 435 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 SLC15A5A6NIM6 579 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 SLITRK5O94991 958 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 RBPJQ06330 500 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 C22orf42Q6IC83 251 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 RGMBQ6NW40 437 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 RABEPKQ7Z6M1 372 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 LRCH3Q96II8 777 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 MCHR1Q99705 422 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 AK6Q9Y3D8 172 aaKnown RBP12.7□□□□□ -0.38
HIPK3-202ENST00000379016 OR51F1A6NGY5 319 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 RHOQP17081 205 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 KCNJ11Q14654 390 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 QPCTQ16769 361 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 FBXO43Q4G163 708 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 OR2T5Q6IEZ7 315 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 GID4Q8IVV7 300 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 OR4K14Q8NGD5 310 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 OR2T29Q8NH02 315 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 EPS8L1Q8TE68 723 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 TMBIM1Q969X1 311 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 CCDC106Q9BWC9 280 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 OR51B5Q9H339 312 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 ZNF160Q9HCG1 818 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 LRRC4CQ9HCJ2 640 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 ZNF334Q9HCZ1 680 aaPredicted RBP12.7□□□□□ -0.38
HIPK3-202ENST00000379016 TCRBV21S2A2A0A5A6 115 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 CDK2AP1O14519 115 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 CT45A6P0DMU7 189 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 CT45A5P0DMU8 189 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 CT45A7P0DMV0 189 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 CT45A8P0DMV1 189 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 CT45A9P0DMV2 189 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 ZNF44P15621 663 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 CT45A2Q5DJT8 189 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 CT45A1Q5HYN5 189 aa12.7□□□□□ -0.38
HIPK3-202ENST00000379016 ZNF454Q8N9F8 522 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms