RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 LCORQ96JN0 433 aaPredicted RBP20.38■□□□□ 0.85
SRM-201ENST00000376957 PPP3R2Q96LZ3 170 aa20.38■□□□□ 0.85
SRM-201ENST00000376957 ZIM3Q96PE6 472 aa20.38■□□□□ 0.85
SRM-201ENST00000376957 TTTY12Q9BZ98 90 aa20.38■□□□□ 0.85
SRM-201ENST00000376957 KCNK9Q9NPC2 374 aa20.38■□□□□ 0.85
SRM-201ENST00000376957 DEPPQ9NTK1 212 aa20.38■□□□□ 0.85
SRM-201ENST00000376957 TAS2R9Q9NYW1 312 aa20.38■□□□□ 0.85
SRM-201ENST00000376957 TAS2R7Q9NYW3 318 aa20.38■□□□□ 0.85
SRM-201ENST00000376957 PLEKHB1Q9UF11 243 aaPredicted RBP20.38■□□□□ 0.85
SRM-201ENST00000376957 ZNF639Q9UID6 485 aa20.38■□□□□ 0.85
SRM-201ENST00000376957 SH3BGRL2Q9UJC5 107 aa20.38■□□□□ 0.85
SRM-201ENST00000376957 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.38■□□□□ 0.85
SRM-201ENST00000376957 RELNP78509 3460 aa20.38■□□□□ 0.85
SRM-201ENST00000376957 DOPEY2Q9Y3R5 2298 aa20.38■□□□□ 0.85
SRM-201ENST00000376957 HSPA4LO95757 839 aa20.37■□□□□ 0.85
SRM-201ENST00000376957 CCL3P10147 92 aa20.37■□□□□ 0.85
SRM-201ENST00000376957 S1PR1P21453 382 aa20.37■□□□□ 0.85
SRM-201ENST00000376957 GPX3P22352 226 aa20.37■□□□□ 0.85
SRM-201ENST00000376957 PTGS2P35354 604 aa20.37■□□□□ 0.85
SRM-201ENST00000376957 ASMTP46597 345 aa20.37■□□□□ 0.85
SRM-201ENST00000376957 RNFT1Q5M7Z0 435 aa20.37■□□□□ 0.85
SRM-201ENST00000376957 FAM219BQ5XKK7 198 aa20.37■□□□□ 0.85
SRM-201ENST00000376957 TMEM198Q66K66 360 aa20.37■□□□□ 0.85
SRM-201ENST00000376957 FAM71E1Q6IPT2 247 aa20.37■□□□□ 0.85
SRM-201ENST00000376957 Q6ZPB1 254 aaPredicted RBP20.37■□□□□ 0.85
SRM-201ENST00000376957 EXOC3L1Q86VI1 746 aa20.37■□□□□ 0.85
SRM-201ENST00000376957 FAM109AQ8N4B1 249 aa20.37■□□□□ 0.85
SRM-201ENST00000376957 OR5M3Q8NGP4 307 aa20.37■□□□□ 0.85
SRM-201ENST00000376957 DIO2Q92813 273 aa20.37■□□□□ 0.85
SRM-201ENST00000376957 ADIPOR1Q96A54 375 aa20.37■□□□□ 0.85
SRM-201ENST00000376957 DOHHQ9BU89 302 aa20.37■□□□□ 0.85
SRM-201ENST00000376957 TNFRSF12AQ9NP84 129 aa20.37■□□□□ 0.85
SRM-201ENST00000376957 ZNF835Q9Y2P0 537 aa20.37■□□□□ 0.85
SRM-201ENST00000376957 ASH1LQ9NR48 2969 aaKnown RBP20.36■□□□□ 0.85
SRM-201ENST00000376957 ANKRD33BA6NCL7 494 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 FAM166BA8MTA8 275 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 G3V3Y1 287 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 ZNF354AO60765 605 aaPredicted RBP20.36■□□□□ 0.85
SRM-201ENST00000376957 COQ9O75208 318 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 SNX4O95219 450 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 CHRNGP07510 517 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 CREB1P16220 341 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 PCSK2P16519 638 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 DRD5P21918 477 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 KRT20P35900 424 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 ETV4P43268 484 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 PPICP45877 212 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 SERPINB4P48594 390 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 NCBP2P52298 156 aaKnown RBP eCLIP20.36■□□□□ 0.85
SRM-201ENST00000376957 SMSP52788 366 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 MGAT2Q10469 447 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 SLC10A1Q14973 349 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 EXOSC7Q15024 291 aaKnown RBP20.36■□□□□ 0.85
SRM-201ENST00000376957 CEBPEQ15744 281 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 GALNTL6Q49A17 601 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 TRMT12Q53H54 448 aaKnown RBP20.36■□□□□ 0.85
SRM-201ENST00000376957 FAM180BQ6P0A1 224 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 RPTNQ6XPR3 784 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 ZCCHC23Q6ZST2 131 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 PACS2Q86VP3 889 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 OR10G3Q8NGC4 313 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 AGR3Q8TD06 166 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 DEFB127Q9H1M4 99 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 LDAHQ9H6V9 325 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 CCL27Q9Y4X3 112 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 CHCHD2Q9Y6H1 151 aaPredicted RBP20.36■□□□□ 0.85
SRM-201ENST00000376957 HIVEP3Q5T1R4 2406 aa20.36■□□□□ 0.85
SRM-201ENST00000376957 A0A1B0GTH9 108 aa20.35■□□□□ 0.85
SRM-201ENST00000376957 PLOD3O60568 738 aa20.35■□□□□ 0.85
SRM-201ENST00000376957 GRK2P25098 689 aa20.35■□□□□ 0.85
SRM-201ENST00000376957 PTGER1P34995 402 aa20.35■□□□□ 0.85
SRM-201ENST00000376957 PIGAP37287 484 aa20.35■□□□□ 0.85
SRM-201ENST00000376957 RPL3P39023 403 aaKnown RBP20.35■□□□□ 0.85
SRM-201ENST00000376957 DNASE1L1P49184 302 aa20.35■□□□□ 0.85
SRM-201ENST00000376957 RPL38P63173 70 aaKnown RBP20.35■□□□□ 0.85
SRM-201ENST00000376957 MRPS35P82673 323 aaKnown RBP20.35■□□□□ 0.85
SRM-201ENST00000376957 KIAA0040Q15053 153 aa20.35■□□□□ 0.85
SRM-201ENST00000376957 LTB4RQ15722 352 aa20.35■□□□□ 0.85
SRM-201ENST00000376957 HYAL4Q2M3T9 481 aa20.35■□□□□ 0.85
SRM-201ENST00000376957 ATP6AP1LQ52LC2 224 aa20.35■□□□□ 0.85
SRM-201ENST00000376957 ZNF628Q5EBL2 1059 aa20.35■□□□□ 0.85
SRM-201ENST00000376957 CMPK2Q5EBM0 449 aa20.35■□□□□ 0.85
SRM-201ENST00000376957 PRAMEF20Q5VT98 475 aa20.35■□□□□ 0.85
SRM-201ENST00000376957 LYPD8Q6UX82 237 aa20.35■□□□□ 0.85
SRM-201ENST00000376957 Q6ZSR9 355 aa20.35■□□□□ 0.85
SRM-201ENST00000376957 MAMDC2Q7Z304 686 aaPredicted RBP20.35■□□□□ 0.85
SRM-201ENST00000376957 R3HCC1LQ7Z5L2 792 aaKnown RBP20.35■□□□□ 0.85
SRM-201ENST00000376957 OR9A2Q8NGT5 310 aa20.35■□□□□ 0.85
SRM-201ENST00000376957 ZFP28Q8NHY6 868 aa20.35■□□□□ 0.85
SRM-201ENST00000376957 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.35■□□□□ 0.855e-33■□□□□ 9.1
SRM-201ENST00000376957 DTNBP1Q96EV8 351 aa20.35■□□□□ 0.85
SRM-201ENST00000376957 JSRP1Q96MG2 331 aaPredicted RBP20.35■□□□□ 0.85
SRM-201ENST00000376957 EXO5Q9H790 373 aa20.35■□□□□ 0.85
SRM-201ENST00000376957 ZFP64Q9NPA5 681 aa20.35■□□□□ 0.85
SRM-201ENST00000376957 SETXQ7Z333 2677 aaKnown RBP20.35■□□□□ 0.85
SRM-201ENST00000376957 LRRK2Q5S007 2527 aa20.34■□□□□ 0.85
SRM-201ENST00000376957 FRG2CA6NGY1 282 aa20.34■□□□□ 0.85
SRM-201ENST00000376957 MYO1GB0I1T2 1018 aa20.34■□□□□ 0.85
SRM-201ENST00000376957 PIP5K1BO14986 540 aa20.34■□□□□ 0.85
SRM-201ENST00000376957 LSM1O15116 133 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms