RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 ZFP41Q8N8Y5 198 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 FBXO15Q8NCQ5 510 aaPredicted RBP19.98■□□□□ 0.79
UPF3A-202ENST00000375299 OR4K5Q8NGD3 323 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 CLIP3Q96DZ5 547 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 IGSF21Q96ID5 467 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 HDHD5Q9BXW7 423 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 SNTNA6NMZ2 147 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 ISM1B1AKI9 464 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 INMT-MINDY4F8WBC2 141 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 MANFP55145 182 aaKnown RBP19.98■□□□□ 0.79
UPF3A-202ENST00000375299 ESCO2Q56NI9 601 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 CMTM8Q8IZV2 173 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 ZNF740Q8NDX6 193 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 HYLS1Q96M11 299 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 FNDC11Q9BVV2 318 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 ZNF717Q9BY31 904 aaPredicted RBP19.98■□□□□ 0.79
UPF3A-202ENST00000375299 IL21Q9HBE4 155 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 PHF11Q9UIL8 331 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 DNMT3AQ9Y6K1 912 aaPredicted RBP19.98■□□□□ 0.79
UPF3A-202ENST00000375299 M0R3H8 397 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 B4GALT2O60909 372 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 LIMS3P0CW19 117 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 LIMS4P0CW20 117 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 OR12D1P0DN82 309 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 DDCP20711 480 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 CD79BP40259 229 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 AVPR1BP47901 424 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 ZNF284Q2VY69 593 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 MINDY4Q4G0A6 757 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 MZT2AQ6P582 158 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 TMEM220Q6QAJ8 160 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 TRILQ7L0X0 811 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 LINC00471Q8N535 108 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 SLC37A3Q8NCC5 494 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 GPA33Q99795 319 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 CDH10Q9Y6N8 788 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 MTCL1Q9Y4B5 1905 aaKnown RBP19.97■□□□□ 0.79
UPF3A-202ENST00000375299 NUP210Q8TEM1 1887 aaPredicted RBP19.97■□□□□ 0.79
UPF3A-202ENST00000375299 PDPK1O15530 556 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 SLC28A2O43868 658 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 NCR1O76036 304 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 CKMP06732 381 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 CA8P35219 290 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 SOX18P35713 384 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 MAPK12P53778 367 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 TMEM115Q12893 351 aaPredicted RBP19.97■□□□□ 0.79
UPF3A-202ENST00000375299 SPDYE7PQ495Y7 208 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 C1orf94Q6P1W5 598 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 BRAT1Q6PJG6 821 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 SLC9B2Q86UD5 537 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 AMIGO1Q86WK6 493 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 SLC9A6Q92581 669 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 GLYATL1Q969I3 302 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 SENP5Q96HI0 755 aaPredicted RBP19.97■□□□□ 0.79
UPF3A-202ENST00000375299 NEUROD4Q9HD90 331 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 B3GNT2Q9NY97 397 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 SLC23A1Q9UHI7 598 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 SATB2Q9UPW6 733 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 CLCA2Q9UQC9 943 aa19.97■□□□□ 0.79
UPF3A-202ENST00000375299 PLOD3O60568 738 aa19.96■□□□□ 0.79
UPF3A-202ENST00000375299 IFI30P13284 250 aa19.96■□□□□ 0.79
UPF3A-202ENST00000375299 UQCRC1P31930 480 aa19.96■□□□□ 0.79
UPF3A-202ENST00000375299 MTNR1AP48039 350 aa19.96■□□□□ 0.79
UPF3A-202ENST00000375299 EPHB3P54753 998 aa19.96■□□□□ 0.79
UPF3A-202ENST00000375299 ENTPD8Q5MY95 495 aa19.96■□□□□ 0.79
UPF3A-202ENST00000375299 ZNF57Q68EA5 555 aaPredicted RBP19.96■□□□□ 0.79
UPF3A-202ENST00000375299 SHFQ7M4L6 423 aa19.96■□□□□ 0.79
UPF3A-202ENST00000375299 COMTD1Q86VU5 262 aa19.96■□□□□ 0.79
UPF3A-202ENST00000375299 MARCH9Q86YJ5 346 aa19.96■□□□□ 0.79
UPF3A-202ENST00000375299 C9orf62Q8N4C0 152 aa19.96■□□□□ 0.79
UPF3A-202ENST00000375299 RAET1EQ8TD07 263 aa19.96■□□□□ 0.79
UPF3A-202ENST00000375299 CREB3L1Q96BA8 519 aa19.96■□□□□ 0.79
UPF3A-202ENST00000375299 AP2M1Q96CW1 435 aa19.96■□□□□ 0.79
UPF3A-202ENST00000375299 PPP1R16AQ96I34 528 aa19.96■□□□□ 0.79
UPF3A-202ENST00000375299 DCLRE1CQ96SD1 692 aaKnown RBP19.96■□□□□ 0.79
UPF3A-202ENST00000375299 PLA2G12AQ9BZM1 189 aa19.96■□□□□ 0.79
UPF3A-202ENST00000375299 MAN2C1Q9NTJ4 1040 aa19.96■□□□□ 0.79
UPF3A-202ENST00000375299 NFKBIL1Q9UBC1 381 aaPredicted RBP19.96■□□□□ 0.79
UPF3A-202ENST00000375299 ADAM30Q9UKF2 790 aa19.96■□□□□ 0.79
UPF3A-202ENST00000375299 LEUTXA8MZ59 168 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 GRM6O15303 877 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 GAAP10253 952 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 LSM11P83369 360 aaKnown RBP eCLIP19.95■□□□□ 0.78
UPF3A-202ENST00000375299 HSPB3Q12988 150 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 KIF18BQ86Y91 864 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 ARIH2OSQ8N7S6 290 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 ZNF485Q8NCK3 441 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 MORN4Q8NDC4 146 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 UBE2E3Q969T4 207 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 SCLYQ96I15 445 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 COQ7Q99807 217 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 SIRT3Q9NTG7 399 aaPredicted RBP19.95■□□□□ 0.78
UPF3A-202ENST00000375299 TAS2R7Q9NYW3 318 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 ASB4Q9Y574 426 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 SCN5AQ14524 2016 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 LALBAP00709 142 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 M6PRP20645 277 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 AP2S1P53680 142 aaPredicted RBP19.95■□□□□ 0.78
UPF3A-202ENST00000375299 TAP2Q03519 686 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 LRRC56Q8IYG6 542 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms