RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 TSACCQ96A04 125 aaPredicted RBP11.4□□□□□ -0.59
HMGCL-202ENST00000374487 YIPF6Q96EC8 236 aa11.4□□□□□ -0.59
HMGCL-202ENST00000374487 TOE1Q96GM8 510 aaKnown RBP11.4□□□□□ -0.59
HMGCL-202ENST00000374487 YIPF4Q9BSR8 244 aa11.4□□□□□ -0.59
HMGCL-202ENST00000374487 SPATA5L1Q9BVQ7 753 aa11.4□□□□□ -0.59
HMGCL-202ENST00000374487 SRMSQ9H3Y6 488 aa11.4□□□□□ -0.59
HMGCL-202ENST00000374487 NECTIN3Q9NQS3 549 aa11.4□□□□□ -0.59
HMGCL-202ENST00000374487 GIMAP4Q9NUV9 329 aa11.4□□□□□ -0.59
HMGCL-202ENST00000374487 CA5BQ9Y2D0 317 aa11.4□□□□□ -0.59
HMGCL-202ENST00000374487 PLXND1Q9Y4D7 1925 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 C4orf51C9J302 202 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 OR10H3O60404 316 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 AIFM1O95831 613 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 EML2O95834 649 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 H1F0P07305 194 aaKnown RBP11.39□□□□□ -0.59
HMGCL-202ENST00000374487 MPIP34949 423 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 FEN1P39748 380 aaKnown RBP11.39□□□□□ -0.59
HMGCL-202ENST00000374487 ACTR1BP42025 376 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 DHPSP49366 369 aaPredicted RBP11.39□□□□□ -0.59
HMGCL-202ENST00000374487 ARFIP1P53367 373 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 CRISP3P54108 245 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 SMIM11AP58511 58 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 KIAA1024LP59773 190 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 ACTR1AP61163 376 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 VBP1P61758 197 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 RPL6Q02878 288 aaKnown RBP11.39□□□□□ -0.59
HMGCL-202ENST00000374487 SFSWAPQ12872 951 aaKnown RBP11.39□□□□□ -0.59
HMGCL-202ENST00000374487 GNA13Q14344 377 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 MAPK11Q15759 364 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 GPR19Q15760 415 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 ZNF750Q32MQ0 723 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 TMEM236Q5W0B7 351 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 C18orf63Q68DL7 685 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 KLHL17Q6TDP4 642 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 USP30Q70CQ3 517 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 STX19Q8N4C7 294 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 ASB12Q8WXK4 309 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 OTUB1Q96FW1 271 aaPredicted RBP11.39□□□□□ -0.59
HMGCL-202ENST00000374487 WDR92Q96MX6 357 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 SARGQ9BW04 601 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 GPR174Q9BXC1 333 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 RXFP3Q9NSD7 469 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 ETAA1Q9NY74 926 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 ZNF226Q9NYT6 803 aa11.39□□□□□ -0.59
HMGCL-202ENST00000374487 OR2A25A4D2G3 310 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 FAM227AF5H4B4 570 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 MPZL2O60487 215 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 HMGN2P05204 90 aaKnown RBP11.38□□□□□ -0.59
HMGCL-202ENST00000374487 HOXC4P09017 264 aaPredicted RBP11.38□□□□□ -0.59
HMGCL-202ENST00000374487 INHBBP09529 407 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 CD36P16671 472 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 CSNK2A2P19784 350 aaPredicted RBP11.38□□□□□ -0.59
HMGCL-202ENST00000374487 TGM1P22735 817 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 CHMP24386 653 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 ALDH4A1P30038 563 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 SLC19A1P41440 591 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 TSFMP43897 325 aaKnown RBP11.38□□□□□ -0.59
HMGCL-202ENST00000374487 CRISP1P54107 249 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 BTN3A2P78410 334 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 LASP1Q14847 261 aaKnown RBP11.38□□□□□ -0.59
HMGCL-202ENST00000374487 NFATC4Q14934 902 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 UBE2UQ5VVX9 321 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 MRM1Q6IN84 353 aaKnown RBP11.38□□□□□ -0.59
HMGCL-202ENST00000374487 FRMPD2BQ6IN97 320 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 ZNF425Q6IV72 752 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 SLC48A1Q6P1K1 146 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 TMEM107Q6UX40 140 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 PTCHD4Q6ZW05 846 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 SLCO6A1Q86UG4 719 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 RBM45Q8IUH3 476 aaKnown RBP11.38□□□□□ -0.59
HMGCL-202ENST00000374487 B4GALNT2Q8NHY0 566 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 GGHQ92820 318 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 SLC22A18Q96BI1 424 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 CNRIP1Q96F85 164 aaPredicted RBP11.38□□□□□ -0.59
HMGCL-202ENST00000374487 ITPAQ9BY32 194 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 MS4A12Q9NXJ0 267 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 GPR83Q9NYM4 423 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 USP36Q9P275 1121 aaKnown RBP11.38□□□□□ -0.59
HMGCL-202ENST00000374487 GPC6Q9Y625 555 aaPredicted RBP11.38□□□□□ -0.59
HMGCL-202ENST00000374487 ZNF780BQ9Y6R6 833 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 EP300Q09472 2414 aaPredicted RBP11.38□□□□□ -0.59
HMGCL-202ENST00000374487 PRAMEF27A3QJZ7 478 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 M0R129 80 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 BTN3A3O00478 584 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 PFDN1O60925 122 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 UGT2B17O75795 530 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 RASGRP1O95267 797 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 OXSR1O95747 527 aaPredicted RBP11.38□□□□□ -0.59
HMGCL-202ENST00000374487 ADAP00813 363 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 CDK1P06493 297 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 FHP07954 510 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 PRR5P85299 388 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 TEKQ02763 1124 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 RGS1Q08116 209 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 SF3A2Q15428 464 aaKnown RBP11.38□□□□□ -0.59
HMGCL-202ENST00000374487 GPAT3Q53EU6 434 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 PMS2CLQ68D20 193 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 ZNF770Q6IQ21 691 aaPredicted RBP11.38□□□□□ -0.59
HMGCL-202ENST00000374487 TMEM64Q6YI46 380 aa11.38□□□□□ -0.59
HMGCL-202ENST00000374487 FAM92BQ6ZTR7 304 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms