RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 TWSG1Q9GZX9 223 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 DUSP21Q9H596 190 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 PRORYQ9H606 182 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 FZD3Q9NPG1 666 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 SLC35C2Q9NQQ7 365 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 PRDM8Q9NQV8 689 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 TEX10Q9NXF1 929 aaPredicted RBP13.27□□□□□ -0.29
LDB3-204ENST00000372066 P2RX2Q9UBL9 471 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 CDC14AQ9UNH5 594 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 PLEKHM1Q9Y4G2 1056 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 TESMINQ9Y4I5 508 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 LOC400499M0QZD8 3231 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 IGSF10Q6WRI0 2623 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 H3BMQ9 156 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 B4GAT1O43505 415 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 MT-CO3P00414 261 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 SERPIND1P05546 499 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 CHRM5P08912 532 aaPredicted RBP13.26□□□□□ -0.29
LDB3-204ENST00000372066 PPP2R1BP30154 601 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 AKT2P31751 481 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 POLR2IP36954 125 aaKnown RBP13.26□□□□□ -0.29
LDB3-204ENST00000372066 LIMS1P48059 325 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 CCT3P49368 545 aaKnown RBP13.26□□□□□ -0.29
LDB3-204ENST00000372066 PLA2G16P53816 162 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 HSPB3Q12988 150 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 KIR2DS3Q14952 304 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 TOR1AIP1Q5JTV8 583 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 AP1ARQ63HQ0 302 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 LGI4Q8N135 537 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 DEPDC4Q8N2C3 294 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 PARP8Q8N3A8 854 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 HORMAD2Q8N7B1 307 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 TMEM145Q8NBT3 493 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 LCN9Q8WX39 176 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 OR1E3Q8WZA6 343 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 PROX1Q92786 737 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 GAL3ST3Q96A11 431 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 COG8Q96MW5 612 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 NRTNQ99748 197 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 C17orf62Q9BQA9 187 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 GPN2Q9H9Y4 310 aaPredicted RBP13.26□□□□□ -0.29
LDB3-204ENST00000372066 ZNF556Q9HAH1 456 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 GIMAP4Q9NUV9 329 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 UCKL1Q9NWZ5 548 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 KLF15Q9UIH9 416 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 KCND3Q9UK17 655 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 ENTPD4Q9Y227 616 aa13.26□□□□□ -0.29
LDB3-204ENST00000372066 PRAMEF33A0A0G2JMD5 474 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 ERI3O43414 337 aaKnown RBP13.25□□□□□ -0.29
LDB3-204ENST00000372066 BRINP1O60477 761 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 PRAMEF10O60809 474 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 SERPINB7O75635 380 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 PRB1P04280 392 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 BCHEP06276 602 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 HTR1AP08908 422 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 TFPTP0C1Z6 253 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 AGXTP21549 392 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 ATP5A1P25705 553 aaKnown RBP13.25□□□□□ -0.29
LDB3-204ENST00000372066 PEBP1P30086 187 aaKnown RBP13.25□□□□□ -0.29
LDB3-204ENST00000372066 GPC1P35052 558 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 GGT2P36268 569 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 CDH12P55289 794 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 SMIM11AP58511 58 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 RPP38P78345 283 aaKnown RBP13.25□□□□□ -0.29
LDB3-204ENST00000372066 SLC35A2P78381 396 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 C19orf57Q0VDD7 668 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 HYAL2Q12891 473 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 SLAMF1Q13291 335 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 LAPTM4AQ15012 233 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 PRAMEF8Q5VWM4 474 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 PRAMEF7Q5VXH5 474 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 ENPP7Q6UWV6 458 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 ZNF793Q6ZN11 406 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 B3GNT8Q7Z7M8 397 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 PAQR7Q86WK9 346 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 KRT73Q86Y46 540 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 BPIFB6Q8NFQ5 453 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 OR13H1Q8NG92 308 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 OR56A1Q8NGH5 318 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 SNIP1Q8TAD8 396 aaKnown RBP13.25□□□□□ -0.29
LDB3-204ENST00000372066 BBS10Q8TAM1 723 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 CNIH3Q8TBE1 160 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 NT5CQ8TCD5 201 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 SLC39A7Q92504 469 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 THAP11Q96EK4 314 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 TMEM19Q96HH6 336 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 AMDHD1Q96NU7 426 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 BBS4Q96RK4 519 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 SPATA5L1Q9BVQ7 753 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 PRDM9Q9NQV7 894 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 PRDM7Q9NQW5 492 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 TRNAU1APQ9NX07 287 aaKnown RBP13.25□□□□□ -0.29
LDB3-204ENST00000372066 ASB4Q9Y574 426 aa13.25□□□□□ -0.29
LDB3-204ENST00000372066 COL5A1P20908 1838 aaPredicted RBP13.25□□□□□ -0.29
LDB3-204ENST00000372066 SMG1Q96Q15 3661 aaKnown RBP13.25□□□□□ -0.29
LDB3-204ENST00000372066 ANKRD33BA6NCL7 494 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 POM121BA6NF01 834 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 ISM1B1AKI9 464 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 CCNB2O95067 398 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 GADD45GO95257 159 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms