RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 GOLM1Q8NBJ4 401 aa11.92□□□□□ -0.5
HCFC1-202ENST00000369984 ZNF382Q96SR6 550 aa11.92□□□□□ -0.5
HCFC1-202ENST00000369984 CCDC32Q9BV29 185 aa11.92□□□□□ -0.5
HCFC1-202ENST00000369984 GPR4P46093 362 aa11.92□□□□□ -0.5
HCFC1-202ENST00000369984 RAB5CP51148 216 aa11.92□□□□□ -0.5
HCFC1-202ENST00000369984 NKX2-5P52952 324 aaPredicted RBP11.92□□□□□ -0.5
HCFC1-202ENST00000369984 C14orf28Q4W4Y0 310 aa11.92□□□□□ -0.5
HCFC1-202ENST00000369984 CCBE1Q6UXH8 406 aaPredicted RBP11.92□□□□□ -0.5
HCFC1-202ENST00000369984 CCDC71Q8IV32 467 aaPredicted RBP11.92□□□□□ -0.5
HCFC1-202ENST00000369984 DEFB119Q8N690 84 aa11.92□□□□□ -0.5
HCFC1-202ENST00000369984 BOLLQ8N9W6 283 aaKnown RBP11.92□□□□□ -0.5
HCFC1-202ENST00000369984 OR5H2Q8NGV7 314 aa11.92□□□□□ -0.5
HCFC1-202ENST00000369984 ABCG5Q9H222 651 aa11.92□□□□□ -0.5
HCFC1-202ENST00000369984 SOX17Q9H6I2 414 aaPredicted RBP11.92□□□□□ -0.5
HCFC1-202ENST00000369984 CYP8B1Q9UNU6 501 aa11.92□□□□□ -0.5
HCFC1-202ENST00000369984 DNMT3AQ9Y6K1 912 aaPredicted RBP11.92□□□□□ -0.5
HCFC1-202ENST00000369984 H7BY64 318 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 EEDO75530 441 aaKnown RBP11.91□□□□□ -0.5
HCFC1-202ENST00000369984 LPLP06858 475 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 UCHL1P09936 223 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 OR8U9P0C7N5 309 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 NTRK2Q16620 822 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 FAM122CQ6P4D5 195 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 ENDOVQ8N8Q3 282 aaKnown RBP11.91□□□□□ -0.5
HCFC1-202ENST00000369984 PLEKHO2Q8TD55 490 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 PRAP1Q96NZ9 151 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 FAM83CQ9BQN1 747 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 C11orf84Q9BUA3 381 aaPredicted RBP11.91□□□□□ -0.5
HCFC1-202ENST00000369984 ZNF442Q9H7R0 627 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 UBR2Q8IWV8 1755 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 RGPD5Q99666 1765 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 RFPL2O75678 378 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 GK2Q14410 553 aaPredicted RBP11.91□□□□□ -0.5
HCFC1-202ENST00000369984 KDELC1Q6UW63 502 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 LILRB2Q8N423 598 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 SUSD3Q96L08 255 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 CCDC106Q9BWC9 280 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 HDHD5Q9BXW7 423 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.91□□□□□ -0.5
HCFC1-202ENST00000369984 HIPK2Q9H2X6 1198 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 PRODH2Q9UF12 536 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 IGLV3-22A0A075B6J6 115 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 A8MXE2 369 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 SNRPD2P62316 118 aaKnown RBP11.91□□□□□ -0.5
HCFC1-202ENST00000369984 PSPHP78330 225 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 GBX1Q14549 363 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 PAFAH1B3Q15102 231 aaKnown RBP11.91□□□□□ -0.5
HCFC1-202ENST00000369984 SPHARQ15513 63 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 RAB30Q15771 203 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 ASRGL1Q7L266 308 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 NRROSQ86YC3 692 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 METTL4Q8N3J2 472 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 ZMAT5Q9UDW3 170 aaKnown RBP11.91□□□□□ -0.5
HCFC1-202ENST00000369984 ACSL6Q9UKU0 697 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 EEF1E1-BLOC1S5C9J1V9 151 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 NRP1O14786 923 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 PRKCZQ05513 592 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 TMEM115Q12893 351 aaPredicted RBP11.91□□□□□ -0.5
HCFC1-202ENST00000369984 ZNF648Q5T619 568 aaPredicted RBP11.91□□□□□ -0.5
HCFC1-202ENST00000369984 GTPBP8Q8N3Z3 284 aaPredicted RBP11.91□□□□□ -0.5
HCFC1-202ENST00000369984 FNDC8Q8TC99 324 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 POU2F3Q9UKI9 436 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 TMEM14AQ9Y6G1 99 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 ENDOUP21128 410 aaKnown RBP11.91□□□□□ -0.5
HCFC1-202ENST00000369984 RORAP35398 523 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 HTD2P86397 168 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 GALK2Q01415 458 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 APOFQ13790 326 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 C6orf141Q5SZD1 244 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 DEDD2Q8WXF8 326 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 ZDHHC12Q96GR4 267 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 ARL5BQ96KC2 179 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 C2orf42Q9NWW7 574 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 KCNK6Q9Y257 313 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 CA5BQ9Y2D0 317 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 ARGFXA6NJG6 315 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 H0Y8G0 127 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 MPPED1O15442 326 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 PRKYO43930 277 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 CFHP08603 1231 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 EEF1A1P68104 462 aaKnown RBP11.91□□□□□ -0.5
HCFC1-202ENST00000369984 EEF1A1P5Q5VTE0 462 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 NTPCRQ9BSD7 190 aaKnown RBP11.91□□□□□ -0.5
HCFC1-202ENST00000369984 DCCP43146 1447 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 SERINC3Q13530 473 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 RBM39Q14498 530 aaKnown RBP11.91□□□□□ -0.5
HCFC1-202ENST00000369984 FAM182AQ5T1J6 154 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 CHADLQ6NUI6 762 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 PLD6Q8N2A8 252 aaKnown RBP11.91□□□□□ -0.5
HCFC1-202ENST00000369984 OR51A7Q8NH64 312 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 CLEC4DQ8WXI8 215 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 LRR1Q96L50 414 aa11.91□□□□□ -0.5
HCFC1-202ENST00000369984 OR5H15A6NDH6 313 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 OR5H14A6NHG9 310 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 TMEM88BA6NKF7 163 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 OR5H1A6NKK0 313 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 USP2O75604 605 aaPredicted RBP11.9□□□□□ -0.5
HCFC1-202ENST00000369984 BEST1O76090 585 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 CHRNB4P30926 498 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 THBS2P35442 1172 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms