RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 ADAM29Q9UKF5 820 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 SLCO1B1Q9Y6L6 691 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 A0A096LPI6 279 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 FEZF1A0PJY2 475 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 ARHGAP10A1A4S6 786 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 C2orf74A8MZ97 194 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 ACOT8O14734 319 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 VILLO15195 856 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 NDUFS4O43181 175 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 PSPNO60542 156 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 KRT36O76013 467 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 SORBS2O94875 1100 aaKnown RBP8.26□□□□□ -1.09
TPM3-213ENST00000368545 LY86O95711 162 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 AFF3P51826 1226 aaKnown RBP8.26□□□□□ -1.09
TPM3-213ENST00000368545 NXPH1P58417 271 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 RPS15AP62244 130 aaKnown RBP8.26□□□□□ -1.09
TPM3-213ENST00000368545 YBX1P67809 324 aaKnown RBP8.26□□□□□ -1.09
TPM3-213ENST00000368545 HHEXQ03014 270 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 CCNIQ14094 377 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 SLC5A12Q1EHB4 618 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 HKDC1Q2TB90 917 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 ZNF542PQ5EBM4 170 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 LRIF1Q5T3J3 769 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 NANOGP8Q6NSW7 305 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 DLEU7Q6UYE1 221 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 NUDT13Q86X67 352 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 TMEM132CQ8N3T6 1108 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 FAM46DQ8NEK8 389 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 CDC26Q8NHZ8 85 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 DNAJB14Q8TBM8 379 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 MTERF3Q96E29 417 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 EGLN2Q96KS0 407 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 ALPK1Q96QP1 1244 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 TRIM15Q9C019 465 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 LDAHQ9H6V9 325 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 NANOGQ9H9S0 305 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 CMTM6Q9NX76 183 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 KLK4Q9Y5K2 254 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 AP1M2Q9Y6Q5 423 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 MYO18BQ8IUG5 2567 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 B4DGG1 531 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 H0Y3Z8 333 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 BTN3A3O00478 584 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 PLPP1O14494 284 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 HAT1O14929 419 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 BCAT2O15382 392 aaPredicted RBP8.25□□□□□ -1.09
TPM3-213ENST00000368545 ZW10O43264 779 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 SUV39H1O43463 412 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 SH3BGRLO75368 114 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 LRATO95237 230 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 TCN1P20061 433 aaPredicted RBP8.25□□□□□ -1.09
TPM3-213ENST00000368545 TSFMP43897 325 aaKnown RBP8.25□□□□□ -1.09
TPM3-213ENST00000368545 FASLGP48023 281 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 TRPC1P48995 793 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 CCT8P50990 548 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 C21orf59P57076 290 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 CYP4F2P78329 520 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 LY6DQ14210 128 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 ANXA8L1Q5VT79 327 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 KIAA1614Q5VZ46 1190 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 TMEM26Q6ZUK4 368 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 OOSP2Q86WS3 158 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 RNF148Q8N7C7 305 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 MFSD9Q8NBP5 474 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 SRFBP1Q8NEF9 429 aaKnown RBP8.25□□□□□ -1.09
TPM3-213ENST00000368545 BHLHE22Q8NFJ8 381 aaPredicted RBP8.25□□□□□ -1.09
TPM3-213ENST00000368545 SLC26A7Q8TE54 656 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 CREB3L4Q8TEY5 395 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 TP53INP1Q96A56 240 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 ANKRD27Q96NW4 1050 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 OR2A14Q96R47 310 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 REXO4Q9GZR2 422 aaKnown RBP8.25□□□□□ -1.09
TPM3-213ENST00000368545 UCK1Q9HA47 277 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 TMEM74BQ9NUR3 256 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 ATP6V1HQ9UI12 483 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 SLC13A4Q9UKG4 626 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 PACSIN3Q9UKS6 424 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 WDR87Q6ZQQ6 2873 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 ABCA7Q8IZY2 2146 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 IGSF10Q6WRI0 2623 aa8.25□□□□□ -1.09
TPM3-213ENST00000368545 GSAPA4D1B5 854 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 OR2A25A4D2G3 310 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 OR6C74A6NCV1 312 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 F2RL2O00254 374 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 SAP18O00422 153 aaKnown RBP8.24□□□□□ -1.09
TPM3-213ENST00000368545 RFXANKO14593 260 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 AQP9O43315 295 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 KLK1P06870 262 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 UGT2B7P16662 529 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 HTR1EP28566 365 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 STAT5AP42229 794 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 GRIA3P42263 894 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 TRA2BP62995 288 aaKnown RBP8.24□□□□□ -1.09
TPM3-213ENST00000368545 IL13RA1P78552 427 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 RELAQ04206 551 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 SLC13A2Q13183 592 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 C1orf61Q13536 156 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 PDE7AQ13946 482 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 CCNYL2Q5T2Q4 361 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms