RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 DEFB127Q9H1M4 99 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 IL1RL2Q9HB29 575 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 RRAGDQ9NQL2 400 aaPredicted RBP17.44■□□□□ 0.38
CKS1B-203ENST00000368439 EHD3Q9NZN3 535 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 POLR3HQ9Y535 204 aaPredicted RBP17.44■□□□□ 0.38
CKS1B-203ENST00000368439 HRH3Q9Y5N1 445 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 NPFFR2Q9Y5X5 522 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 MAST4O15021 2626 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 NAV2Q8IVL1 2488 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 ADAM10O14672 748 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 NPHS1O60500 1241 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 CHRNGP07510 517 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 FGF4P08620 206 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 FREM3P0C091 2139 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 ABOP16442 354 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 PCSK2P16519 638 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 DDCP20711 480 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 ARRB2P32121 409 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 ETV4P43268 484 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 EMDP50402 254 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 ADORA2A-AS1P86434 159 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 PLGLB1Q02325 96 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 IMPG1Q17R60 797 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 UGT3A2Q3SY77 523 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 C6orf163Q5TEZ5 329 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 OR6Y1Q8NGX8 325 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 EXOSC8Q96B26 276 aaKnown RBP17.43■□□□□ 0.38
CKS1B-203ENST00000368439 NTNG2Q96CW9 530 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 METTL2AQ96IZ6 378 aaKnown RBP17.43■□□□□ 0.38
CKS1B-203ENST00000368439 FCRL1Q96LA6 429 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 PHF12Q96QT6 1004 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 SMC6Q96SB8 1091 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 ITPAQ9BY32 194 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 NXF5Q9H1B4 397 aaKnown RBP17.43■□□□□ 0.38
CKS1B-203ENST00000368439 MYNNQ9NPC7 610 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 SLC35C2Q9NQQ7 365 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 CNIH4Q9P003 139 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 MEMO1Q9Y316 297 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 DNAJC15Q9Y5T4 150 aa17.43■□□□□ 0.38
CKS1B-203ENST00000368439 MYO1GB0I1T2 1018 aa17.42■□□□□ 0.38
CKS1B-203ENST00000368439 CDC40O60508 579 aaKnown RBP eCLIP17.42■□□□□ 0.38
CKS1B-203ENST00000368439 PDE9AO76083 593 aa17.42■□□□□ 0.38
CKS1B-203ENST00000368439 IGHG3P01860 377 aa17.42■□□□□ 0.38
CKS1B-203ENST00000368439 MAGEA5P43359 124 aa17.42■□□□□ 0.38
CKS1B-203ENST00000368439 CASP6P55212 293 aa17.42■□□□□ 0.38
CKS1B-203ENST00000368439 FBXW4P57775 412 aa17.42■□□□□ 0.38
CKS1B-203ENST00000368439 C2orf80Q0P641 193 aa17.42■□□□□ 0.38
CKS1B-203ENST00000368439 ARL13AQ5H913 290 aaPredicted RBP17.42■□□□□ 0.38
CKS1B-203ENST00000368439 PRAMEF20Q5VT98 475 aa17.42■□□□□ 0.38
CKS1B-203ENST00000368439 HLA-DQA1Q5Y7H0 255 aa17.42■□□□□ 0.38
CKS1B-203ENST00000368439 NOXRED1Q6NXP6 359 aa17.42■□□□□ 0.38
CKS1B-203ENST00000368439 SLC22A16Q86VW1 577 aa17.42■□□□□ 0.38
CKS1B-203ENST00000368439 FAM13CQ8NE31 585 aa17.42■□□□□ 0.38
CKS1B-203ENST00000368439 OR52R1Q8NGF1 315 aa17.42■□□□□ 0.38
CKS1B-203ENST00000368439 OR9A2Q8NGT5 310 aa17.42■□□□□ 0.38
CKS1B-203ENST00000368439 FAM57AQ8TBR7 257 aa17.42■□□□□ 0.38
CKS1B-203ENST00000368439 ANKRA2Q9H9E1 313 aa17.42■□□□□ 0.38
CKS1B-203ENST00000368439 TAS2R7Q9NYW3 318 aa17.42■□□□□ 0.38
CKS1B-203ENST00000368439 SUCOQ9UBS9 1254 aaKnown RBP17.42■□□□□ 0.38
CKS1B-203ENST00000368439 BCAP29Q9UHQ4 241 aa17.42■□□□□ 0.38
CKS1B-203ENST00000368439 WBP11Q9Y2W2 641 aaKnown RBP17.42■□□□□ 0.38
CKS1B-203ENST00000368439 LIPGQ9Y5X9 500 aa17.42■□□□□ 0.38
CKS1B-203ENST00000368439 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.42■□□□□ 0.38
CKS1B-203ENST00000368439 ANKRD33BA6NCL7 494 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 LRRC3CA6NJW4 275 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 TMEM233B4DJY2 109 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 ACOT7O00154 380 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 SLC28A1O00337 649 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 LRATO95237 230 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 CELA3AP09093 270 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 TACR1P25103 407 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 ABCD3P28288 659 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 PTGS2P35354 604 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 RPS6KA2Q15349 733 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 KRT71Q3SY84 523 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 TNFAIP8L3Q5GJ75 292 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 MTFR2Q6P444 385 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 ARHGAP11AQ6P4F7 1023 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 ZCCHC23Q6ZST2 131 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 NCCRP1Q6ZVX7 275 aaPredicted RBP17.41■□□□□ 0.38
CKS1B-203ENST00000368439 PRR22Q8IZ63 422 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 SAMD14Q8IZD0 417 aaPredicted RBP17.41■□□□□ 0.38
CKS1B-203ENST00000368439 FAM109AQ8N4B1 249 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 OR5M3Q8NGP4 307 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 SPPL2AQ8TCT8 520 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 ERP27Q96DN0 273 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 EGLN2Q96KS0 407 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 DMRTA2Q96SC8 542 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 C1orf109Q9NX04 203 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 CFL2Q9Y281 166 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 CRYBG3Q68DQ2 2970 aa17.41■□□□□ 0.38
CKS1B-203ENST00000368439 A0A1B0GVC2 190 aa17.4■□□□□ 0.38
CKS1B-203ENST00000368439 PRRG2O14669 202 aa17.4■□□□□ 0.38
CKS1B-203ENST00000368439 TRIM3O75382 744 aaPredicted RBP17.4■□□□□ 0.38
CKS1B-203ENST00000368439 SEC22BO75396 215 aa17.4■□□□□ 0.38
CKS1B-203ENST00000368439 BPGMP07738 259 aa17.4■□□□□ 0.38
CKS1B-203ENST00000368439 ABCB1P08183 1280 aaPredicted RBP17.4■□□□□ 0.38
CKS1B-203ENST00000368439 RFPL3SP0C7P2 107 aa17.4■□□□□ 0.38
CKS1B-203ENST00000368439 NNATQ16517 81 aa17.4■□□□□ 0.38
CKS1B-203ENST00000368439 EMC4Q5J8M3 183 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms