RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 SOWAHCQ53LP3 525 aaPredicted RBP19.19■□□□□ 0.66
CBWD3-201ENST00000360171 FRMPD2BQ6IN97 320 aa19.19■□□□□ 0.66
CBWD3-201ENST00000360171 FAM71E1Q6IPT2 247 aa19.19■□□□□ 0.66
CBWD3-201ENST00000360171 GDPGP1Q6ZNW5 385 aa19.19■□□□□ 0.66
CBWD3-201ENST00000360171 GDPD3Q7L5L3 318 aa19.19■□□□□ 0.66
CBWD3-201ENST00000360171 OR52E1Q8NGJ3 308 aa19.19■□□□□ 0.66
CBWD3-201ENST00000360171 SETD7Q8WTS6 366 aaKnown RBP19.19■□□□□ 0.66
CBWD3-201ENST00000360171 NUAK2Q9H093 628 aa19.19■□□□□ 0.66
CBWD3-201ENST00000360171 MVB12BQ9H7P6 319 aa19.19■□□□□ 0.66
CBWD3-201ENST00000360171 EHD3Q9NZN3 535 aa19.19■□□□□ 0.66
CBWD3-201ENST00000360171 NDOR1Q9UHB4 597 aa19.19■□□□□ 0.66
CBWD3-201ENST00000360171 PDGFBP01127 241 aaPredicted RBP19.18■□□□□ 0.66
CBWD3-201ENST00000360171 C1GALT1C1LP0DN25 315 aa19.18■□□□□ 0.66
CBWD3-201ENST00000360171 S100A1P23297 94 aa19.18■□□□□ 0.66
CBWD3-201ENST00000360171 PKLRP30613 574 aa19.18■□□□□ 0.66
CBWD3-201ENST00000360171 CXCL12P48061 93 aa19.18■□□□□ 0.66
CBWD3-201ENST00000360171 MEF2AQ02078 507 aaPredicted RBP19.18■□□□□ 0.66
CBWD3-201ENST00000360171 RHAGQ02094 409 aa19.18■□□□□ 0.66
CBWD3-201ENST00000360171 DMWDQ09019 674 aa19.18■□□□□ 0.66
CBWD3-201ENST00000360171 SLBPQ14493 270 aaKnown RBP eCLIP19.18■□□□□ 0.66
CBWD3-201ENST00000360171 ZNF770Q6IQ21 691 aaPredicted RBP19.18■□□□□ 0.66
CBWD3-201ENST00000360171 NXPE4Q6UWF7 544 aa19.18■□□□□ 0.66
CBWD3-201ENST00000360171 WASH2PQ6VEQ5 465 aa19.18■□□□□ 0.66
CBWD3-201ENST00000360171 ARMCX6Q7L4S7 300 aa19.18■□□□□ 0.66
CBWD3-201ENST00000360171 FAM46DQ8NEK8 389 aa19.18■□□□□ 0.66
CBWD3-201ENST00000360171 SETD6Q8TBK2 473 aa19.18■□□□□ 0.66
CBWD3-201ENST00000360171 WASH6PQ9NQA3 447 aa19.18■□□□□ 0.66
CBWD3-201ENST00000360171 DMRT3Q9NQL9 472 aa19.18■□□□□ 0.66
CBWD3-201ENST00000360171 PCOLCE2Q9UKZ9 415 aa19.18■□□□□ 0.66
CBWD3-201ENST00000360171 ICKQ9UPZ9 632 aa19.18■□□□□ 0.66
CBWD3-201ENST00000360171 CACNA1IQ9P0X4 2223 aa19.18■□□□□ 0.66
CBWD3-201ENST00000360171 KNL1Q8NG31 2342 aa19.18■□□□□ 0.66
CBWD3-201ENST00000360171 PRAMEF10O60809 474 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 CELA2BP08218 269 aaPredicted RBP19.17■□□□□ 0.66
CBWD3-201ENST00000360171 ENDOUP21128 410 aaKnown RBP19.17■□□□□ 0.66
CBWD3-201ENST00000360171 MAOBP27338 520 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 KRT33BQ14525 404 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 MPEG1Q2M385 716 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 KLHL17Q6TDP4 642 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 C16orf78Q8WTQ4 265 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 SMPDL3AQ92484 453 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 OR5M11Q96RB7 305 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 SLC25A19Q9HC21 320 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 ZNF624Q9P2J8 865 aaPredicted RBP19.17■□□□□ 0.66
CBWD3-201ENST00000360171 J3KTA2 159 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 ARHGAP33O14559 1287 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 SH3BGRLO75368 114 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 ADAP00813 363 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 TNFP01375 233 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 WNT1P04628 370 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 HSMCR30P0CW71 290 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 BCKDHBP21953 392 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 CD27P26842 260 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 RAB28P51157 221 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 CRISP3P54108 245 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 SNRPGP62308 76 aaKnown RBP19.17■□□□□ 0.66
CBWD3-201ENST00000360171 RPL6Q02878 288 aaKnown RBP19.17■□□□□ 0.66
CBWD3-201ENST00000360171 MED22Q15528 200 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 TSTQ16762 297 aaKnown RBP19.17■□□□□ 0.66
CBWD3-201ENST00000360171 SLC5A12Q1EHB4 618 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 MEDAGQ5VYS4 303 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 PTCHD4Q6ZW05 846 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 IKBIPQ70UQ0 350 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 RNF130Q86XS8 419 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 KRT73Q86Y46 540 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 AQP11Q8NBQ7 271 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 JPH3Q8WXH2 748 aaPredicted RBP19.17■□□□□ 0.66
CBWD3-201ENST00000360171 KLHDC7BQ96G42 594 aa19.17■□□□□ 0.66
CBWD3-201ENST00000360171 SDHCQ99643 169 aaPredicted RBP19.17■□□□□ 0.66
CBWD3-201ENST00000360171 PIPSLA2A3N6 862 aa19.16■□□□□ 0.66
CBWD3-201ENST00000360171 IFNW1P05000 195 aa19.16■□□□□ 0.66
CBWD3-201ENST00000360171 SCG5P05408 212 aa19.16■□□□□ 0.66
CBWD3-201ENST00000360171 CHI3L1P36222 383 aaPredicted RBP19.16■□□□□ 0.66
CBWD3-201ENST00000360171 CYP4F2P78329 520 aa19.16■□□□□ 0.66
CBWD3-201ENST00000360171 C2orf80Q0P641 193 aa19.16■□□□□ 0.66
CBWD3-201ENST00000360171 TMEM201Q5SNT2 666 aa19.16■□□□□ 0.66
CBWD3-201ENST00000360171 AGAP6Q5VW22 663 aa19.16■□□□□ 0.66
CBWD3-201ENST00000360171 PRR23CQ6ZRP0 262 aa19.16■□□□□ 0.66
CBWD3-201ENST00000360171 ZNF740Q8NDX6 193 aa19.16■□□□□ 0.66
CBWD3-201ENST00000360171 IL17RDQ8NFM7 739 aa19.16■□□□□ 0.66
CBWD3-201ENST00000360171 CADM4Q8NFZ8 388 aa19.16■□□□□ 0.66
CBWD3-201ENST00000360171 TMCO6Q96DC7 493 aa19.16■□□□□ 0.66
CBWD3-201ENST00000360171 AGAP4Q96P64 663 aa19.16■□□□□ 0.66
CBWD3-201ENST00000360171 SLC30A2Q9BRI3 323 aa19.16■□□□□ 0.66
CBWD3-201ENST00000360171 NMNAT1Q9HAN9 279 aaPredicted RBP19.16■□□□□ 0.66
CBWD3-201ENST00000360171 CUEDC1Q9NWM3 386 aaPredicted RBP19.16■□□□□ 0.66
CBWD3-201ENST00000360171 HEBP2Q9Y5Z4 205 aa19.16■□□□□ 0.66
CBWD3-201ENST00000360171 CCDC88CQ9P219 2028 aa19.16■□□□□ 0.66
CBWD3-201ENST00000360171 TRBV23OR9-2A0A075B6M9 112 aa19.16■□□□□ 0.66
CBWD3-201ENST00000360171 TRBC2A0A5B9 178 aa19.16■□□□□ 0.66
CBWD3-201ENST00000360171 ZXDAP98168 799 aa19.16■□□□□ 0.66
CBWD3-201ENST00000360171 SSX1Q16384 188 aa19.16■□□□□ 0.66
CBWD3-201ENST00000360171 OR2L8Q8NGY9 312 aa19.16■□□□□ 0.66
CBWD3-201ENST00000360171 GPBAR1Q8TDU6 330 aa19.16■□□□□ 0.66
CBWD3-201ENST00000360171 GTPBP3Q969Y2 492 aaKnown RBP19.16■□□□□ 0.66
CBWD3-201ENST00000360171 A0A1W2PR77 199 aa19.15■□□□□ 0.66
CBWD3-201ENST00000360171 RGS13O14921 159 aa19.15■□□□□ 0.66
CBWD3-201ENST00000360171 RECKO95980 971 aa19.15■□□□□ 0.66
CBWD3-201ENST00000360171 F3P13726 295 aa19.15■□□□□ 0.66
CBWD3-201ENST00000360171 CNR2P34972 360 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms