RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 SPCS2Q15005 226 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 LRIT3Q3SXY7 679 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 CTSL3PQ5NE16 218 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 MORN1Q5T089 497 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 PLAG1Q6DJT9 500 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 DESI1Q6ICB0 168 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 C17orf99Q6UX52 265 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 ALKAL1Q6UXT8 129 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 Q6ZSR9 355 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 TRIM43Q96BQ3 446 aaPredicted RBP13.05□□□□□ -0.32
VCP-201ENST00000358901 ZNF583Q96ND8 569 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 METTL8Q9H825 291 aaKnown RBP13.05□□□□□ -0.32
VCP-201ENST00000358901 DNMT3AQ9Y6K1 912 aaPredicted RBP13.05□□□□□ -0.32
VCP-201ENST00000358901 CACNA1SQ13698 1873 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 MROH6A6NGR9 719 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 UBFD1O14562 309 aaKnown RBP13.05□□□□□ -0.32
VCP-201ENST00000358901 UGDHO60701 494 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 RBBP9O75884 186 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 KAT7O95251 611 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 GP1BBP13224 206 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 HSD11B1P28845 292 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 MAGEA8P43361 318 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 FNTBP49356 437 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 SNRPD2P62316 118 aaKnown RBP13.05□□□□□ -0.32
VCP-201ENST00000358901 EIF5AP63241 154 aaKnown RBP13.05□□□□□ -0.32
VCP-201ENST00000358901 METTL2BQ6P1Q9 378 aaKnown RBP13.05□□□□□ -0.32
VCP-201ENST00000358901 SPAG16Q8N0X2 631 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 TSTD1Q8NFU3 115 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 HCAR2Q8TDS4 363 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 FCAMRQ8WWV6 532 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 MMABQ96EY8 250 aaPredicted RBP13.05□□□□□ -0.32
VCP-201ENST00000358901 GTPBP2Q9BX10 602 aaKnown RBP13.05□□□□□ -0.32
VCP-201ENST00000358901 CLMPQ9H6B4 373 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 HPF1Q9NWY4 346 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 CLDND1Q9NY35 253 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 CNIH4Q9P003 139 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 ZNF878C9JN71 531 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 UPK1BO75841 260 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 RPS21P63220 83 aaKnown RBP13.05□□□□□ -0.32
VCP-201ENST00000358901 ZNF33BQ06732 778 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 EIF4HQ15056 248 aaKnown RBP13.05□□□□□ -0.32
VCP-201ENST00000358901 ITPRIPL2Q3MIP1 535 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 TMEM35AQ53FP2 167 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 GALNT7Q86SF2 657 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 PNLDC1Q8NA58 520 aaKnown RBP13.05□□□□□ -0.32
VCP-201ENST00000358901 LAMA4Q16363 1823 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 NPIPA5E9PKD4 350 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 HCRTR2O43614 444 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 GATBO75879 557 aaKnown RBP13.04□□□□□ -0.32
VCP-201ENST00000358901 HOXD9P28356 352 aaPredicted RBP13.04□□□□□ -0.32
VCP-201ENST00000358901 CTSCP53634 463 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 ACTC1P68032 377 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 ACTA1P68133 377 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 E2F1Q01094 437 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 TMEM69Q5SWH9 247 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 FRMPD2BQ6IN97 320 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 CEP68Q76N32 757 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 TMPRSS12Q86WS5 348 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 KLHDC9Q8NEP7 349 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 OR56A3Q8NH54 315 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 CCDC120Q96HB5 630 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 OR4K3Q96R72 315 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 SORBS1Q9BX66 1292 aaKnown RBP13.04□□□□□ -0.32
VCP-201ENST00000358901 CREBZFQ9NS37 354 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 FBXL3Q9UKT7 428 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 NUP50Q9UKX7 468 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 NPIPA1Q9UND3 350 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 PLEKHA6Q9Y2H5 1048 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 PCDHA9Q9Y5H5 950 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 NUAK1O60285 661 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 PFKLP17858 780 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 IL1RNP18510 177 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 NR4A2P43354 598 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 FXYD6P3P58550 94 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 PRKCDQ05655 676 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 LRRC37A5PQ49AS3 106 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 XKRXQ6PP77 449 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 Q6ZPB1 254 aaPredicted RBP13.04□□□□□ -0.32
VCP-201ENST00000358901 HSD11B1LQ7Z5J1 315 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 PGBD5Q8N414 524 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 ANKK1Q8NFD2 765 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 OR51L1Q8NGJ5 315 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 SETD6Q8TBK2 473 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 TMEM41AQ96HV5 264 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 MRPL15Q9P015 296 aaKnown RBP13.04□□□□□ -0.32
VCP-201ENST00000358901 SCP2D1Q9UJQ7 156 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 MEMO1Q9Y316 297 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 GXYLT2A0PJZ3 443 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 OR6C74A6NCV1 312 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 PRKYO43930 277 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 CYB5AP00167 134 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 ADH1BP00325 375 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 GRPRP30550 384 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 PTGER1P34995 402 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 MAP4K2Q12851 820 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 ARHGAP40Q5TG30 622 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 KCTD9Q7L273 389 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 MEX3DQ86XN8 651 aaKnown RBP13.04□□□□□ -0.32
VCP-201ENST00000358901 CCDC28AQ8IWP9 274 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 PTCHD1Q96NR3 888 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms