RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 TRMT11Q7Z4G4 463 aaKnown RBP9.58□□□□□ -0.88
PTPRA-203ENST00000356147 KIF18BQ86Y91 864 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 ADGRF3Q8IZF5 1079 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 AMER3Q8N944 861 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 UFD1Q92890 307 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 ARSGQ96EG1 525 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 SCLYQ96I15 445 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 ATF6BQ99941 703 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 TREX2Q9BQ50 279 aaPredicted RBP9.58□□□□□ -0.88
PTPRA-203ENST00000356147 MACROD1Q9BQ69 325 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 FNDC11Q9BVV2 318 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 SERHL2Q9H4I8 314 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 A4GNTQ9UNA3 340 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 DIMT1Q9UNQ2 313 aaKnown RBP9.58□□□□□ -0.88
PTPRA-203ENST00000356147 NTNG1Q9Y2I2 539 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 DYRK1BQ9Y463 629 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 LOC105369274A0A096LPK9 316 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 SERTM1A2A2V5 107 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 SLC16A5O15375 505 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 SLC2A10O95528 541 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 LIMS3P0CW19 117 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 LIMS4P0CW20 117 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 ELK1P19419 428 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 PRKACBP22694 351 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 HLA-DMAP28067 261 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 IRS1P35568 1242 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 ATP6V1E1P36543 226 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 NNMTP40261 264 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 SRP54P61011 504 aaKnown RBP9.58□□□□□ -0.88
PTPRA-203ENST00000356147 POU6F2P78424 691 aaPredicted RBP9.58□□□□□ -0.88
PTPRA-203ENST00000356147 MAB21L1Q13394 359 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 ARSIQ5FYB1 569 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 FAM26DQ5JW98 314 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 HSDL2Q6YN16 418 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 TRAPPC5Q8IUR0 188 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 OR4N4Q8N0Y3 316 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 BBS1Q8NFJ9 593 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 OR8D4Q8NGM9 314 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 OR56A3Q8NH54 315 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 ZNF461Q8TAF7 563 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 SMAP2Q8WU79 429 aaPredicted RBP9.58□□□□□ -0.88
PTPRA-203ENST00000356147 PDXPQ96GD0 296 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 LYSMD1Q96S90 227 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 EXTL2Q9UBQ6 330 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 TESQ9UGI8 421 aaKnown RBP9.58□□□□□ -0.88
PTPRA-203ENST00000356147 PRELID1Q9Y255 219 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 GSTK1Q9Y2Q3 226 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 A0A0A6YYJ9 748 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 I3L521 148 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 BTN3A3O00478 584 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 HMGN4O00479 90 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 HYAL3O43820 417 aaPredicted RBP9.57□□□□□ -0.88
PTPRA-203ENST00000356147 LZTS3O60299 673 aaPredicted RBP9.57□□□□□ -0.88
PTPRA-203ENST00000356147 TOXO94900 526 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 C1GALT1C1LP0DN25 315 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 TFPIP10646 304 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 TMEM115Q12893 351 aaPredicted RBP9.57□□□□□ -0.88
PTPRA-203ENST00000356147 TMEM201Q5SNT2 666 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 CST9Q5W186 159 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 CCSAPQ6IQ19 270 aaPredicted RBP9.57□□□□□ -0.88
PTPRA-203ENST00000356147 MZT2BQ6NZ67 158 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 NR2C2APQ86WQ0 139 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 KLBQ86Z14 1044 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 ECHDC3Q96DC8 303 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 TMEM43Q9BTV4 400 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 SAP130Q9H0E3 1048 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 TMEM245Q9H330 911 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 ATP13A2Q9NQ11 1180 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 TDP1Q9NUW8 608 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 KLHL21Q9UJP4 597 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 ZFR2Q9UPR6 939 aaKnown RBP9.57□□□□□ -0.88
PTPRA-203ENST00000356147 MRPS7Q9Y2R9 242 aaKnown RBP9.57□□□□□ -0.88
PTPRA-203ENST00000356147 GLTPD2A6NH11 291 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 K7ESM1 405 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 FAAHO00519 579 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 LEFTY1O75610 366 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 NR2F1P10589 423 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 HSD3B1P14060 373 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 UQCRC2P22695 453 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 HSD3B2P26439 372 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 MAPK8P45983 427 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 MTNR1AP48039 350 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 EVX1P49640 407 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 METAP1P53582 386 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 PCDH1Q08174 1060 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 IRF5Q13568 498 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 PDE7AQ13946 482 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 GPNMBQ14956 572 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 GRIN2CQ14957 1233 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 ZNF750Q32MQ0 723 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 QSOX2Q6ZRP7 698 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 TMEM25Q86YD3 366 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 PLCZ1Q86YW0 608 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 RAET1EQ8TD07 263 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 MS4A3Q96HJ5 214 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 C1QTNF6Q9BXI9 259 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 RNF32Q9H0A6 362 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 SLC28A3Q9HAS3 691 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 MGAT4AQ9UM21 535 aa9.57□□□□□ -0.88
PTPRA-203ENST00000356147 CCL26Q9Y258 94 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms