RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 G3V3Y1 287 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 BIRC5O15392 142 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 COQ9O75208 318 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 NADKO95544 446 aaPredicted RBP14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 CHRNGP07510 517 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 CCL3P10147 92 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 NAGAP17050 411 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 PTGS2P35354 604 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 CA7P43166 264 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 ASMTP46597 345 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 NCBP2P52298 156 aaKnown RBP eCLIP14.54□□□□□ -0.085e-7■■■■□ 24.3
TSPAN4-201ENST00000346501 EXOSC7Q15024 291 aaKnown RBP14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 NTRK2Q16620 822 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 GALNTL6Q49A17 601 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 FAM219BQ5XKK7 198 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 TMEM198Q66K66 360 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 FAM71E1Q6IPT2 247 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 EXOC3L1Q86VI1 746 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 SIAH3Q8IW03 269 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 FBXW8Q8N3Y1 598 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 FAM109AQ8N4B1 249 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 OR52R1Q8NGF1 315 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 ZFP28Q8NHY6 868 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 DTNBP1Q96EV8 351 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 LCORQ96JN0 433 aaPredicted RBP14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 PSMG3-AS1Q96PY0 264 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 SECISBP2Q96T21 854 aaKnown RBP14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 DOHHQ9BU89 302 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 TTTY12Q9BZ98 90 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 EXO5Q9H790 373 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 CROCCQ5TZA2 2017 aa14.54□□□□□ -0.08
TSPAN4-201ENST00000346501 HIVEP3Q5T1R4 2406 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 WDR91A4D1P6 747 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 FAM166BA8MTA8 275 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 SERPINE1P05121 402 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 CREB1P16220 341 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 PCSK2P16519 638 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 GPX3P22352 226 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 GRK2P25098 689 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 RPL3P39023 403 aaKnown RBP14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 PPICP45877 212 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 MASP1P48740 699 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 DNASE1L1P49184 302 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 SMSP52788 366 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 RPL38P63173 70 aaKnown RBP14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 PLCXD2Q0VAA5 305 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 LTB4RQ15722 352 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 ATP6AP1LQ52LC2 224 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 TRMT12Q53H54 448 aaKnown RBP14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 PRAMEF20Q5VT98 475 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 HHATQ5VTY9 493 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 FAM180BQ6P0A1 224 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 RPTNQ6XPR3 784 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 R3HCC1LQ7Z5L2 792 aaKnown RBP14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 PACS2Q86VP3 889 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 ZNF441Q8N8Z8 693 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 OR9A2Q8NGT5 310 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 ADIPOR1Q96A54 375 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 CTHRC1Q96CG8 243 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 JSRP1Q96MG2 331 aaPredicted RBP14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 PAIP2Q9BPZ3 127 aaKnown RBP14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 DEFB127Q9H1M4 99 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 LDAHQ9H6V9 325 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 TNFRSF12AQ9NP84 129 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 DEPPQ9NTK1 212 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 TAS2R7Q9NYW3 318 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 PLEKHB1Q9UF11 243 aaPredicted RBP14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 ZNF639Q9UID6 485 aa14.53□□□□□ -0.08
TSPAN4-201ENST00000346501 WIPF3A6NGB9 483 aa14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 PIP5K1BO14986 540 aa14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 PLOD3O60568 738 aa14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 ZNF354AO60765 605 aaPredicted RBP14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 PDE9AO76083 593 aa14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 SNX4O95219 450 aa14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 CLPSP04118 112 aa14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 JUNP05412 331 aaKnown RBP14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 TPOP07202 933 aa14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 S1PR1P21453 382 aa14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 DRD5P21918 477 aa14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 GPC1P35052 558 aa14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 PIGAP37287 484 aa14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 ETV4P43268 484 aa14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 MRPS22P82650 360 aaKnown RBP14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 MRPS35P82673 323 aaKnown RBP14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 MAD2L1Q13257 205 aaPredicted RBP14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 SLC10A1Q14973 349 aa14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 ZNHIT3Q15649 155 aaPredicted RBP14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 CHI3L2Q15782 390 aa14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 ZNF628Q5EBL2 1059 aa14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 RNFT1Q5M7Z0 435 aa14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 Q6ZPB1 254 aaPredicted RBP14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 MAMDC2Q7Z304 686 aaPredicted RBP14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 NUP54Q7Z3B4 507 aa14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 OR10G3Q8NGC4 313 aa14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 KAT2AQ92830 837 aa14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 PPCDCQ96CD2 204 aa14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 ZNF597Q96LX8 424 aa14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 PRPF18Q99633 342 aaKnown RBP14.52□□□□□ -0.09
TSPAN4-201ENST00000346501 ITPAQ9BY32 194 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms