RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 LRRC32Q14392 662 aa18.97■□□□□ 0.63
SPG7-202ENST00000341316 WDR53Q7Z5U6 358 aaPredicted RBP18.97■□□□□ 0.63
SPG7-202ENST00000341316 AKAP14Q86UN6 197 aa18.97■□□□□ 0.63
SPG7-202ENST00000341316 CCDC116Q8IYX3 515 aa18.97■□□□□ 0.63
SPG7-202ENST00000341316 Q96MT0 163 aa18.97■□□□□ 0.63
SPG7-202ENST00000341316 BBS4Q96RK4 519 aa18.97■□□□□ 0.63
SPG7-202ENST00000341316 ZNF607Q96SK3 696 aa18.97■□□□□ 0.63
SPG7-202ENST00000341316 SEMA3GQ9NS98 782 aa18.97■□□□□ 0.63
SPG7-202ENST00000341316 TBC1D29Q9UFV1 150 aa18.97■□□□□ 0.63
SPG7-202ENST00000341316 APOBEC3BQ9UH17 382 aaKnown RBP18.97■□□□□ 0.63
SPG7-202ENST00000341316 CA5BQ9Y2D0 317 aa18.97■□□□□ 0.63
SPG7-202ENST00000341316 CAB39Q9Y376 341 aaPredicted RBP18.97■□□□□ 0.63
SPG7-202ENST00000341316 AIFM1O95831 613 aa18.96■□□□□ 0.63
SPG7-202ENST00000341316 DNTTP04053 509 aa18.96■□□□□ 0.63
SPG7-202ENST00000341316 H1F0P07305 194 aaKnown RBP18.96■□□□□ 0.63
SPG7-202ENST00000341316 CHRM4P08173 479 aa18.96■□□□□ 0.63
SPG7-202ENST00000341316 HSMCR30P0CW71 290 aa18.96■□□□□ 0.63
SPG7-202ENST00000341316 NR2F1P10589 423 aa18.96■□□□□ 0.63
SPG7-202ENST00000341316 CERS1P27544 350 aa18.96■□□□□ 0.63
SPG7-202ENST00000341316 COL9A2Q14055 689 aaPredicted RBP18.96■□□□□ 0.63
SPG7-202ENST00000341316 DOC2BQ14184 412 aa18.96■□□□□ 0.63
SPG7-202ENST00000341316 IRF3Q14653 427 aa18.96■□□□□ 0.63
SPG7-202ENST00000341316 DGLUCYQ7Z3D6 616 aa18.96■□□□□ 0.63
SPG7-202ENST00000341316 TBC1D19Q8N5T2 526 aa18.96■□□□□ 0.63
SPG7-202ENST00000341316 PRUNE2Q8WUY3 3088 aa18.96■□□□□ 0.63
SPG7-202ENST00000341316 EFHD2Q96C19 240 aaPredicted RBP18.96■□□□□ 0.63
SPG7-202ENST00000341316 FUZQ9BT04 418 aa18.96■□□□□ 0.63
SPG7-202ENST00000341316 FAIM2Q9BWQ8 316 aa18.96■□□□□ 0.63
SPG7-202ENST00000341316 CD93Q9NPY3 652 aa18.96■□□□□ 0.63
SPG7-202ENST00000341316 C11orf16Q9NQ32 467 aa18.96■□□□□ 0.63
SPG7-202ENST00000341316 ACAD8Q9UKU7 415 aa18.96■□□□□ 0.63
SPG7-202ENST00000341316 TMCC3Q9ULS5 477 aa18.96■□□□□ 0.63
SPG7-202ENST00000341316 A4GNTQ9UNA3 340 aa18.96■□□□□ 0.63
SPG7-202ENST00000341316 ALOX12P18054 663 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 NTSR1P30989 418 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 RGS6P49758 472 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 ZNF45Q02386 682 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 PRKCDQ05655 676 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 FBXO43Q4G163 708 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 CCDC92Q53HC0 331 aaPredicted RBP18.95■□□□□ 0.62
SPG7-202ENST00000341316 ZNF362Q5T0B9 420 aaPredicted RBP18.95■□□□□ 0.62
SPG7-202ENST00000341316 DCST1Q5T197 706 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 DESI1Q6ICB0 168 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 PTCHD4Q6ZW05 846 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 IL17RCQ8NAC3 791 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 OR2L5Q8NG80 312 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 SLC7A13Q8TCU3 470 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 SCARF2Q96GP6 870 aaPredicted RBP18.95■□□□□ 0.62
SPG7-202ENST00000341316 C16orf58Q96GQ5 468 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 FCRL4Q96PJ5 515 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 IL4I1Q96RQ9 567 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 GABRG3Q99928 467 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 UCK2Q9BZX2 261 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 LMAN2LQ9H0V9 348 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 KCNE3Q9Y6H6 103 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 PRSS38A1L453 326 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 CACNB4O00305 520 aaPredicted RBP18.95■□□□□ 0.62
SPG7-202ENST00000341316 OR10H3O60404 316 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 ADAP00813 363 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 AK4P27144 223 aaPredicted RBP18.95■□□□□ 0.62
SPG7-202ENST00000341316 NTSP30990 170 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 LASP1Q14847 261 aaKnown RBP18.95■□□□□ 0.62
SPG7-202ENST00000341316 PGBD2Q6P3X8 592 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 TMEM184AQ6ZMB5 413 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 DNAJC5GQ8N7S2 189 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 OR4E2Q8NGC2 313 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 ANKRA2Q9H9E1 313 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 CES1P1Q9UKY3 287 aa18.95■□□□□ 0.62
SPG7-202ENST00000341316 MYO10Q9HD67 2058 aa18.94■□□□□ 0.62
SPG7-202ENST00000341316 H0Y8X5 98 aa18.94■□□□□ 0.62
SPG7-202ENST00000341316 NME6O75414 186 aaPredicted RBP18.94■□□□□ 0.62
SPG7-202ENST00000341316 PTTG1O95997 202 aa18.94■□□□□ 0.62
SPG7-202ENST00000341316 HMGN2P05204 90 aaKnown RBP18.94■□□□□ 0.62
SPG7-202ENST00000341316 OSMP13725 252 aa18.94■□□□□ 0.62
SPG7-202ENST00000341316 AHRP35869 848 aa18.94■□□□□ 0.62
SPG7-202ENST00000341316 LIMK1P53667 647 aa18.94■□□□□ 0.62
SPG7-202ENST00000341316 ABATP80404 500 aa18.94■□□□□ 0.62
SPG7-202ENST00000341316 LSM11P83369 360 aaKnown RBP eCLIP18.94■□□□□ 0.623e-7■■□□□ 12.9
SPG7-202ENST00000341316 PPP2R2DQ66LE6 453 aa18.94■□□□□ 0.62
SPG7-202ENST00000341316 ZNF425Q6IV72 752 aa18.94■□□□□ 0.62
SPG7-202ENST00000341316 TMEM107Q6UX40 140 aa18.94■□□□□ 0.62
SPG7-202ENST00000341316 ENOPH1Q9UHY7 261 aa18.94■□□□□ 0.62
SPG7-202ENST00000341316 IFT52Q9Y366 437 aa18.94■□□□□ 0.62
SPG7-202ENST00000341316 ISM1B1AKI9 464 aa18.94■□□□□ 0.62
SPG7-202ENST00000341316 TPST2O60704 377 aa18.94■□□□□ 0.62
SPG7-202ENST00000341316 KCNJ13O60928 360 aa18.94■□□□□ 0.62
SPG7-202ENST00000341316 PCYT1AP49585 367 aa18.94■□□□□ 0.62
SPG7-202ENST00000341316 UGT2B15P54855 530 aa18.94■□□□□ 0.62
SPG7-202ENST00000341316 LRIT3Q3SXY7 679 aa18.94■□□□□ 0.62
SPG7-202ENST00000341316 ATAT1Q5SQI0 421 aa18.94■□□□□ 0.62
SPG7-202ENST00000341316 CCL4L1Q8NHW4 92 aa18.94■□□□□ 0.62
SPG7-202ENST00000341316 OR1E3Q8WZA6 343 aa18.94■□□□□ 0.62
SPG7-202ENST00000341316 SARGQ9BW04 601 aa18.94■□□□□ 0.62
SPG7-202ENST00000341316 ROGDIQ9GZN7 287 aa18.94■□□□□ 0.62
SPG7-202ENST00000341316 QRSL1Q9H0R6 528 aaKnown RBP18.94■□□□□ 0.62
SPG7-202ENST00000341316 FAAHO00519 579 aa18.93■□□□□ 0.62
SPG7-202ENST00000341316 EGFP01133 1207 aa18.93■□□□□ 0.62
SPG7-202ENST00000341316 ILKQ13418 452 aa18.93■□□□□ 0.62
SPG7-202ENST00000341316 MFSD9Q8NBP5 474 aa18.93■□□□□ 0.62
SPG7-202ENST00000341316 FAM46DQ8NEK8 389 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms