RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 GALNT12Q8IXK2 581 aa14.29□□□□□ -0.12
LINC01116-202ENST00000339037 CENPLQ8N0S6 344 aaPredicted RBP14.29□□□□□ -0.12
LINC01116-202ENST00000339037 SPPL2AQ8TCT8 520 aa14.29□□□□□ -0.12
LINC01116-202ENST00000339037 NXNL1Q96CM4 212 aa14.29□□□□□ -0.12
LINC01116-202ENST00000339037 MRRFQ96E11 262 aaKnown RBP14.29□□□□□ -0.12
LINC01116-202ENST00000339037 TRIB1Q96RU8 372 aa14.29□□□□□ -0.12
LINC01116-202ENST00000339037 ANGPTL4Q9BY76 406 aa14.29□□□□□ -0.12
LINC01116-202ENST00000339037 CXorf21Q9HAI6 301 aa14.29□□□□□ -0.12
LINC01116-202ENST00000339037 ZDHHC18Q9NUE0 388 aa14.29□□□□□ -0.12
LINC01116-202ENST00000339037 FREM3P0C091 2139 aa14.29□□□□□ -0.12
LINC01116-202ENST00000339037 ZANQ9Y493 2812 aa14.28□□□□□ -0.12
LINC01116-202ENST00000339037 HMX2A2RU54 273 aa14.28□□□□□ -0.12
LINC01116-202ENST00000339037 MBD3L4A6NDZ8 208 aaPredicted RBP14.28□□□□□ -0.12
LINC01116-202ENST00000339037 MBD3L3A6NE82 208 aaPredicted RBP14.28□□□□□ -0.12
LINC01116-202ENST00000339037 MBD3L5A6NJ08 208 aaPredicted RBP14.28□□□□□ -0.12
LINC01116-202ENST00000339037 GFAPP14136 432 aa14.28□□□□□ -0.12
LINC01116-202ENST00000339037 CTSSP25774 331 aa14.28□□□□□ -0.12
LINC01116-202ENST00000339037 OPRM1P35372 400 aa14.28□□□□□ -0.12
LINC01116-202ENST00000339037 CASP3P42574 277 aa14.28□□□□□ -0.12
LINC01116-202ENST00000339037 SETDB1Q15047 1291 aa14.28□□□□□ -0.12
LINC01116-202ENST00000339037 CPSF6Q16630 551 aaKnown RBP eCLIP14.28□□□□□ -0.12
LINC01116-202ENST00000339037 NHSL2Q5HYW2 709 aa14.28□□□□□ -0.12
LINC01116-202ENST00000339037 C8orf74Q6P047 294 aa14.28□□□□□ -0.12
LINC01116-202ENST00000339037 WFDC11Q8NEX6 87 aa14.28□□□□□ -0.12
LINC01116-202ENST00000339037 MBD3L2Q8NHZ7 208 aaPredicted RBP14.28□□□□□ -0.12
LINC01116-202ENST00000339037 LINC01560Q8TB33 94 aa14.28□□□□□ -0.12
LINC01116-202ENST00000339037 KCTD4Q8WVF5 259 aa14.28□□□□□ -0.12
LINC01116-202ENST00000339037 LRRC1Q9BTT6 524 aa14.28□□□□□ -0.12
LINC01116-202ENST00000339037 UGT2B28Q9BY64 529 aa14.28□□□□□ -0.12
LINC01116-202ENST00000339037 EPB41L4BQ9H329 900 aa14.28□□□□□ -0.12
LINC01116-202ENST00000339037 TLN2Q9Y4G6 2542 aa14.28□□□□□ -0.12
LINC01116-202ENST00000339037 A0A1W2PS29 197 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 CLCA1A8K7I4 914 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 UGDHO60701 494 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 GBAP04062 536 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 BMP7P18075 431 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 KRT15P19012 456 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 PIK3R1P27986 724 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 AGFG1P52594 562 aaKnown RBP14.27□□□□□ -0.13
LINC01116-202ENST00000339037 FUT7Q11130 342 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 RCAN2Q14206 197 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 PFKFB4Q16877 469 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 EIPR1Q53HC9 387 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 DCST1Q5T197 706 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 C6orf163Q5TEZ5 329 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 MROH9Q5TGP6 573 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 BIVMQ86UB2 503 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 PRR22Q8IZ63 422 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 C17orf47Q8NEP4 570 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 RHEBL1Q8TAI7 183 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 UCN3Q969E3 161 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 ABTB1Q969K4 478 aaPredicted RBP14.27□□□□□ -0.13
LINC01116-202ENST00000339037 WDYHV1Q96HA8 205 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 TMEM41AQ96HV5 264 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 YIPF4Q9BSR8 244 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 OR10A5Q9H207 317 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 PLEKHF2Q9H8W4 249 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 CALHM2Q9HA72 323 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 ACOT9Q9Y305 439 aa14.27□□□□□ -0.13
LINC01116-202ENST00000339037 FOXE1O00358 373 aaPredicted RBP14.26□□□□□ -0.13
LINC01116-202ENST00000339037 GNB5O14775 395 aa14.26□□□□□ -0.13
LINC01116-202ENST00000339037 PGRMC2O15173 223 aa14.26□□□□□ -0.13
LINC01116-202ENST00000339037 CDH16O75309 829 aa14.26□□□□□ -0.13
LINC01116-202ENST00000339037 GOSR1O95249 250 aa14.26□□□□□ -0.13
LINC01116-202ENST00000339037 IL18BPO95998 194 aa14.26□□□□□ -0.13
LINC01116-202ENST00000339037 CT62P0C5K7 136 aa14.26□□□□□ -0.13
LINC01116-202ENST00000339037 ABCD3P28288 659 aa14.26□□□□□ -0.13
LINC01116-202ENST00000339037 PIK3CGP48736 1102 aa14.26□□□□□ -0.13
LINC01116-202ENST00000339037 NEK2P51955 445 aa14.26□□□□□ -0.13
LINC01116-202ENST00000339037 ALDH18A1P54886 795 aaKnown RBP14.26□□□□□ -0.13
LINC01116-202ENST00000339037 CKAP4Q07065 602 aaKnown RBP14.26□□□□□ -0.13
LINC01116-202ENST00000339037 FAM83EQ2M2I3 478 aa14.26□□□□□ -0.13
LINC01116-202ENST00000339037 WIPI1Q5MNZ9 446 aaPredicted RBP14.26□□□□□ -0.13
LINC01116-202ENST00000339037 TIGD3Q6B0B8 471 aa14.26□□□□□ -0.13
LINC01116-202ENST00000339037 ZNF615Q8N8J6 731 aa14.26□□□□□ -0.13
LINC01116-202ENST00000339037 ADIPOR1Q96A54 375 aa14.26□□□□□ -0.13
LINC01116-202ENST00000339037 C16orf45Q96MC5 204 aaPredicted RBP14.26□□□□□ -0.13
LINC01116-202ENST00000339037 METTL7AQ9H8H3 244 aa14.26□□□□□ -0.13
LINC01116-202ENST00000339037 IPPKQ9H8X2 491 aa14.26□□□□□ -0.13
LINC01116-202ENST00000339037 JKAMPQ9P055 326 aa14.26□□□□□ -0.13
LINC01116-202ENST00000339037 MED12Q93074 2177 aa14.26□□□□□ -0.13
LINC01116-202ENST00000339037 A0A087X1B8 175 aa14.25□□□□□ -0.13
LINC01116-202ENST00000339037 CCDC189A1A4V9 331 aa14.25□□□□□ -0.13
LINC01116-202ENST00000339037 LRRC14BA6NHZ5 514 aa14.25□□□□□ -0.13
LINC01116-202ENST00000339037 ERN1O75460 977 aaKnown RBP14.25□□□□□ -0.13
LINC01116-202ENST00000339037 SEMA3DO95025 777 aa14.25□□□□□ -0.13
LINC01116-202ENST00000339037 ACTL6AO96019 429 aa14.25□□□□□ -0.13
LINC01116-202ENST00000339037 C2P06681 752 aa14.25□□□□□ -0.13
LINC01116-202ENST00000339037 TMIGD3P0DMS9 266 aaPredicted RBP14.25□□□□□ -0.13
LINC01116-202ENST00000339037 CYP4B1P13584 511 aa14.25□□□□□ -0.13
LINC01116-202ENST00000339037 PTPN6P29350 595 aa14.25□□□□□ -0.13
LINC01116-202ENST00000339037 GCKP35557 465 aa14.25□□□□□ -0.13
LINC01116-202ENST00000339037 NAGLUP54802 743 aa14.25□□□□□ -0.13
LINC01116-202ENST00000339037 DCAF7P61962 342 aa14.25□□□□□ -0.13
LINC01116-202ENST00000339037 GTF2H2Q13888 395 aa14.25□□□□□ -0.13
LINC01116-202ENST00000339037 PCBP2Q15366 365 aaKnown RBP eCLIP14.25□□□□□ -0.13
LINC01116-202ENST00000339037 UAP1Q16222 522 aaPredicted RBP14.25□□□□□ -0.13
LINC01116-202ENST00000339037 NNATQ16517 81 aa14.25□□□□□ -0.13
LINC01116-202ENST00000339037 GTF2H2CQ6P1K8 395 aa14.25□□□□□ -0.13
LINC01116-202ENST00000339037 ANGPTL8Q6UXH0 198 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms