RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 WHAMMP3Q1A5X7 153 aa9.77□□□□□ -0.85
CAPN3-202ENST00000337571 NUP54Q7Z3B4 507 aa9.77□□□□□ -0.85
CAPN3-202ENST00000337571 VWA5B2Q8N398 1253 aa9.77□□□□□ -0.85
CAPN3-202ENST00000337571 METTL4Q8N3J2 472 aa9.77□□□□□ -0.85
CAPN3-202ENST00000337571 MNS1Q8NEH6 495 aa9.77□□□□□ -0.85
CAPN3-202ENST00000337571 C17orf47Q8NEP4 570 aa9.77□□□□□ -0.85
CAPN3-202ENST00000337571 OR1J4Q8NGS1 313 aa9.77□□□□□ -0.85
CAPN3-202ENST00000337571 SPPL2AQ8TCT8 520 aa9.77□□□□□ -0.85
CAPN3-202ENST00000337571 SELENOMQ8WWX9 145 aa9.77□□□□□ -0.85
CAPN3-202ENST00000337571 ZNF592Q92610 1267 aa9.77□□□□□ -0.85
CAPN3-202ENST00000337571 ADIPOR1Q96A54 375 aa9.77□□□□□ -0.85
CAPN3-202ENST00000337571 HSPBAP1Q96EW2 488 aa9.77□□□□□ -0.85
CAPN3-202ENST00000337571 PAFAH2Q99487 392 aa9.77□□□□□ -0.85
CAPN3-202ENST00000337571 FMO2Q99518 471 aa9.77□□□□□ -0.85
CAPN3-202ENST00000337571 TIMP4Q99727 224 aa9.77□□□□□ -0.85
CAPN3-202ENST00000337571 FAIM2Q9BWQ8 316 aa9.77□□□□□ -0.85
CAPN3-202ENST00000337571 POLDIP3Q9BY77 421 aaKnown RBP9.77□□□□□ -0.85
CAPN3-202ENST00000337571 MRPL46Q9H2W6 279 aaKnown RBP9.77□□□□□ -0.85
CAPN3-202ENST00000337571 METTL7AQ9H8H3 244 aa9.77□□□□□ -0.85
CAPN3-202ENST00000337571 BRF2Q9HAW0 419 aa9.77□□□□□ -0.85
CAPN3-202ENST00000337571 DNAJB12Q9NXW2 375 aaKnown RBP9.77□□□□□ -0.85
CAPN3-202ENST00000337571 ZNF629Q9UEG4 869 aaPredicted RBP9.77□□□□□ -0.85
CAPN3-202ENST00000337571 PCDHA9Q9Y5H5 950 aa9.77□□□□□ -0.85
CAPN3-202ENST00000337571 INTS1Q8N201 2190 aaKnown RBP9.77□□□□□ -0.85
CAPN3-202ENST00000337571 A0A087WUV0 522 aaPredicted RBP9.76□□□□□ -0.85
CAPN3-202ENST00000337571 A0A1W2PS29 197 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 LRRC3CA6NJW4 275 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 TRIM49D1C9J1S8 452 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 SYT5O00445 386 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 PDYNP01213 254 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 CT62P0C5K7 136 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 TAC1P20366 129 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 BMP5P22003 454 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 TIMP3P35625 211 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 FEN1P39748 380 aaKnown RBP9.76□□□□□ -0.85
CAPN3-202ENST00000337571 CASP3P42574 277 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 ALDH9A1P49189 494 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 CDK9P50750 372 aaKnown RBP9.76□□□□□ -0.85
CAPN3-202ENST00000337571 ART1P52961 327 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 DCAF7P61962 342 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 MAP4K2Q12851 820 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 TRAF3Q13114 568 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 GGTA1PQ4G0N0 100 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 FBXW10Q5XX13 1052 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 SLC30A6Q6NXT4 461 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 SLC48A1Q6P1K1 146 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 COMMD6Q7Z4G1 85 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 LACC1Q8IV20 430 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 ZZZ3Q8IYH5 903 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 PRR22Q8IZ63 422 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 ZNF441Q8N8Z8 693 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 GOT1L1Q8NHS2 421 aaPredicted RBP9.76□□□□□ -0.85
CAPN3-202ENST00000337571 KLHL29Q96CT2 875 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 DTNBP1Q96EV8 351 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 LCORQ96JN0 433 aaPredicted RBP9.76□□□□□ -0.85
CAPN3-202ENST00000337571 NSUN5Q96P11 429 aaKnown RBP9.76□□□□□ -0.85
CAPN3-202ENST00000337571 TRIB1Q96RU8 372 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 FUT8Q9BYC5 575 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 CDC42EP4Q9H3Q1 356 aaKnown RBP9.76□□□□□ -0.85
CAPN3-202ENST00000337571 ZBTB26Q9HCK0 441 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 RRAGDQ9NQL2 400 aaPredicted RBP9.76□□□□□ -0.85
CAPN3-202ENST00000337571 PFDN4Q9NQP4 134 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 VPS29Q9UBQ0 182 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 PRODH2Q9UF12 536 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 FOXD3Q9UJU5 478 aaPredicted RBP9.76□□□□□ -0.85
CAPN3-202ENST00000337571 ZNF180Q9UJW8 692 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 C15orf41Q9Y2V0 281 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 L3MBTL1Q9Y468 752 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 TEP1Q99973 2627 aaKnown RBP9.76□□□□□ -0.85
CAPN3-202ENST00000337571 FREM3P0C091 2139 aa9.76□□□□□ -0.85
CAPN3-202ENST00000337571 CCDC151A5D8V7 595 aa9.75□□□□□ -0.85
CAPN3-202ENST00000337571 GNB5O14775 395 aa9.75□□□□□ -0.85
CAPN3-202ENST00000337571 ACOX3O15254 700 aa9.75□□□□□ -0.85
CAPN3-202ENST00000337571 PPM1BO75688 479 aa9.75□□□□□ -0.85
CAPN3-202ENST00000337571 BCAS2O75934 225 aaPredicted RBP9.75□□□□□ -0.85
CAPN3-202ENST00000337571 SUPT7LO94864 414 aa9.75□□□□□ -0.85
CAPN3-202ENST00000337571 KRT6AP02538 564 aa9.75□□□□□ -0.85
CAPN3-202ENST00000337571 KRT6BP04259 564 aa9.75□□□□□ -0.85
CAPN3-202ENST00000337571 ATP1B1P05026 303 aa9.75□□□□□ -0.85
CAPN3-202ENST00000337571 ABCB1P08183 1280 aaPredicted RBP9.75□□□□□ -0.85
CAPN3-202ENST00000337571 SNRPAP09012 282 aaKnown RBP9.75□□□□□ -0.85
CAPN3-202ENST00000337571 TSPAN8P19075 237 aa9.75□□□□□ -0.85
CAPN3-202ENST00000337571 DRD5P21918 477 aa9.75□□□□□ -0.85
CAPN3-202ENST00000337571 GPX3P22352 226 aa9.75□□□□□ -0.85
CAPN3-202ENST00000337571 DNAJA1P31689 397 aaKnown RBP9.75□□□□□ -0.85
CAPN3-202ENST00000337571 MAGEA12P43365 314 aa9.75□□□□□ -0.85
CAPN3-202ENST00000337571 KRT6CP48668 564 aa9.75□□□□□ -0.85
CAPN3-202ENST00000337571 ASCL1P50553 236 aa9.75□□□□□ -0.85
CAPN3-202ENST00000337571 CDH13P55290 713 aa9.75□□□□□ -0.85
CAPN3-202ENST00000337571 DLX5P56178 289 aa9.75□□□□□ -0.85
CAPN3-202ENST00000337571 TRA2BP62995 288 aaKnown RBP9.75□□□□□ -0.85
CAPN3-202ENST00000337571 CRYZQ08257 329 aaKnown RBP9.75□□□□□ -0.85
CAPN3-202ENST00000337571 PLCXD2Q0VAA5 305 aa9.75□□□□□ -0.85
CAPN3-202ENST00000337571 RCAN2Q14206 197 aa9.75□□□□□ -0.85
CAPN3-202ENST00000337571 TESK1Q15569 626 aa9.75□□□□□ -0.85
CAPN3-202ENST00000337571 PRICKLE4Q2TBC4 344 aa9.75□□□□□ -0.85
CAPN3-202ENST00000337571 ACSF3Q4G176 576 aaPredicted RBP9.75□□□□□ -0.85
CAPN3-202ENST00000337571 GLE1Q53GS7 698 aaKnown RBP9.75□□□□□ -0.85
CAPN3-202ENST00000337571 BICRALQ6AI39 1079 aa9.75□□□□□ -0.85
CAPN3-202ENST00000337571 TIGD3Q6B0B8 471 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms