RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 SLC5A12Q1EHB4 618 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 PROX2Q3B8N5 592 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 NDUFAF5Q5TEU4 345 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 BCDIN3DQ7Z5W3 292 aaKnown RBP6.15□□□□□ -1.42
HMG20A-201ENST00000336216 LHFPL3Q86UP9 236 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 CCDC28AQ8IWP9 274 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 KLHDC8AQ8IYD2 350 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 PLA2G15Q8NCC3 412 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 OR6C4Q8NGE1 309 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 ADAMTS19Q8TE59 1207 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 COQ8BQ96D53 544 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 TRMT2BQ96GJ1 504 aaKnown RBP6.15□□□□□ -1.42
HMG20A-201ENST00000336216 PRR14Q9BWN1 585 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 CLEC4MQ9H2X3 399 aaPredicted RBP6.15□□□□□ -1.42
HMG20A-201ENST00000336216 TMEM27Q9HBJ8 222 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 POLMQ9NP87 494 aaPredicted RBP6.15□□□□□ -1.42
HMG20A-201ENST00000336216 P2RX2Q9UBL9 471 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 CA14Q9ULX7 337 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 LAMA3Q16787 3333 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 PRAMEF33A0A0G2JMD5 474 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 LINC01553A4QN01 128 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 ANHXE9PGG2 379 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 J3KTA2 159 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 AREL1O15033 823 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 HOXC11O43248 304 aaPredicted RBP6.15□□□□□ -1.43
HMG20A-201ENST00000336216 PRAMEF10O60809 474 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 SLC25A12O75746 678 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 ALPPP05187 535 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 PRKAR1AP10644 381 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 PBX2P40425 430 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 PIK3CBP42338 1070 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 LEXMQ3ZCV2 418 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 SPATS1Q496A3 300 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 SMUG1Q53HV7 270 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 LCN1P1Q5VSP4 162 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 ATG9BQ674R7 924 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 FAM109BQ6ICB4 259 aaPredicted RBP6.15□□□□□ -1.43
HMG20A-201ENST00000336216 TUBA3EQ6PEY2 450 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 FAM92BQ6ZTR7 304 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 LIMS2Q7Z4I7 341 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 GPR149Q86SP6 731 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 NOXA1Q86UR1 476 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 LAPTM4BQ86VI4 370 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 ENTHD1Q8IYW4 607 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 NRSN1Q8IZ57 195 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 C10orf111Q8N326 155 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 B3GNT7Q8NFL0 401 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 OR51L1Q8NGJ5 315 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.15□□□□□ -1.434e-8■■■■■ 26.8
HMG20A-201ENST00000336216 GEMIN6Q8WXD5 167 aaKnown RBP6.15□□□□□ -1.43
HMG20A-201ENST00000336216 DEDD2Q8WXF8 326 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 MSANTD3Q96H12 275 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 ZFP3Q96NJ6 502 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 GAS2L1Q99501 681 aaPredicted RBP6.15□□□□□ -1.43
HMG20A-201ENST00000336216 SLC6A16Q9GZN6 736 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 PCBD2Q9H0N5 130 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 RDH14Q9HBH5 336 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 ANKHQ9HCJ1 492 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 TMEFF2Q9UIK5 374 aaPredicted RBP6.15□□□□□ -1.43
HMG20A-201ENST00000336216 ANK1P16157 1881 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 PCM1Q15154 2024 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 SDK2Q58EX2 2172 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 NPIPA5A0A0B4J1W7 369 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 NPIPA7E9PJI5 369 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 H0Y8X5 98 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 ANKRD28O15084 1053 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 C1QCP02747 245 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 MRPL3P09001 348 aaKnown RBP6.15□□□□□ -1.43
HMG20A-201ENST00000336216 HNRNPA1P09651 372 aaKnown RBP eCLIP6.15□□□□□ -1.43
HMG20A-201ENST00000336216 NPIPA8P0DM63 369 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 ACPPP15309 386 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 CR2P20023 1033 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 PRKACBP22694 351 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 NTSR1P30989 418 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 CSTF2P33240 577 aaKnown RBP eCLIP6.15□□□□□ -1.43
HMG20A-201ENST00000336216 CNR2P34972 360 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 RPS21P63220 83 aaKnown RBP6.15□□□□□ -1.43
HMG20A-201ENST00000336216 MAP4K2Q12851 820 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 MPP7Q5T2T1 576 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 ASTLQ6HA08 431 aaPredicted RBP6.15□□□□□ -1.43
HMG20A-201ENST00000336216 SHISA6Q6ZSJ9 500 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 PHC2Q8IXK0 858 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 MMP21Q8N119 569 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 LRRC17Q8N6Y2 441 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 SLC37A3Q8NCC5 494 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 C16orf78Q8WTQ4 265 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 SMPDL3BQ92485 455 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 PIGKQ92643 395 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 EID2BQ96D98 161 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 MMABQ96EY8 250 aaPredicted RBP6.15□□□□□ -1.43
HMG20A-201ENST00000336216 TMEM19Q96HH6 336 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 NRTNQ99748 197 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 PSD2Q9BQI7 771 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 TSSK6Q9BXA6 273 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 IL21Q9HBE4 155 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 FBXO8Q9NRD0 319 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 RLIMQ9NVW2 624 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 HS3ST2Q9Y278 367 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 MAU2Q9Y6X3 613 aa6.15□□□□□ -1.43
HMG20A-201ENST00000336216 MYOFQ9NZM1 2061 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms