RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 PCBD2Q9H0N5 130 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 BCO1Q9HAY6 547 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 CREBZFQ9NS37 354 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 GRHPRQ9UBQ7 328 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 NOTCH3Q9UM47 2321 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 BMP8BP34820 402 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 GAS6Q14393 721 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 GRM3Q14832 879 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 BMP8AQ7Z5Y6 402 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 CNTNAP3Q9BZ76 1288 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 MINDY3Q9H8M7 445 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 SLC28A3Q9HAS3 691 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 UBE2J1Q9Y385 318 aaPredicted RBP9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 CACNA1GO43497 2377 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 STK17BO94768 372 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 RAC2P15153 192 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 RHCEP18577 417 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 RPS14P62263 151 aaKnown RBP9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 CYP27C1Q4G0S4 372 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 PRAMEF18Q5VWM3 479 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 FAM205BPQ63HN1 556 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 LPCAT3Q6P1A2 487 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 CFAP52Q8N1V2 620 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 OR52E4Q8NGH9 312 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 PNPLA2Q96AD5 504 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 ACDQ96AP0 544 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 MMP28Q9H239 520 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 A0A096LPI6 279 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 CHEK1O14757 476 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 PSPHP78330 225 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 BTG3Q14201 252 aaPredicted RBP9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 KCNJ11Q14654 390 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 PCBP2Q15366 365 aaKnown RBP eCLIP9.9□□□□□ -0.829e-6■□□□□ 8.1
SPTBN1-201ENST00000333896 SLAMF9Q96A28 289 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 SLC29A3Q9BZD2 475 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 ADAM19Q9H013 955 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 POU2F3Q9UKI9 436 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 CDHR4A6H8M9 788 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 EEF1E1-BLOC1S5C9J1V9 151 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 HOXB9P17482 250 aaPredicted RBP9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 RAB5AP20339 215 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 GDI1P31150 447 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 GJA5P36382 358 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 C1QTNF8P60827 252 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 EMX2Q04743 252 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 RAB31Q13636 194 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 SLC17A1Q14916 467 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 MLC1Q15049 377 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 IQCJQ1A5X6 159 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 KIAA0930Q6ICG6 404 aaPredicted RBP9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 PIGBQ92521 554 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 DCUN1D4Q92564 292 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 ACSL6Q9UKU0 697 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 FAM96BQ9Y3D0 163 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 SLIT3O75094 1523 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 CNTNAP4Q9C0A0 1308 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 HBE1P02100 147 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 CRHBPP24387 322 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 CTSOP43234 321 aaPredicted RBP9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 CDKN1CP49918 316 aaPredicted RBP9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 BDH1Q02338 343 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 GRIK4Q16099 956 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 DPYSL2Q16555 572 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 SLC27A4Q6P1M0 643 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 ENPP7Q6UWV6 458 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 AZIN2Q96A70 460 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 HINT2Q9BX68 163 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 TOLLIPQ9H0E2 274 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 DCDC2BA2VCK2 349 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 D6RAR5 112 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 FAAHO00519 579 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 RFX5P48382 616 aaPredicted RBP9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 TCTE3Q8IZS6 198 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 OR4C15Q8NGM1 316 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 OR10Z1Q8NGY1 313 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 LILRB1Q8NHL6 650 aaPredicted RBP9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 WRAP53Q9BUR4 548 aaKnown RBP9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 ASAH2Q9NR71 780 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 GAR1Q9NY12 217 aaKnown RBP9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 TRBV23OR9-2A0A075B6M9 112 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 A0A1W2PPK0 400 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 ARP10275 920 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 STEAP3Q658P3 488 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 DPY19L2P1Q6NXN4 242 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 FRS2Q8WU20 508 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 TMEM134Q9H6X4 195 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 IL37Q9NZH6 218 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 COQ4Q9Y3A0 265 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 TLX2O43763 284 aaPredicted RBP9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 NPBWR1P48145 328 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 DCAF12L1Q5VU92 463 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 UEVLDQ8IX04 471 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 C16orf78Q8WTQ4 265 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 TIFAQ96CG3 184 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 APMAPQ9HDC9 416 aa9.9□□□□□ -0.82
SPTBN1-201ENST00000333896 TJP1Q07157 1748 aa9.9□□□□□ -0.83
SPTBN1-201ENST00000333896 LOC102724200A0A096LPH7 203 aaPredicted RBP9.9□□□□□ -0.83
SPTBN1-201ENST00000333896 DUXAA6NLW8 204 aa9.9□□□□□ -0.83
SPTBN1-201ENST00000333896 SEC14L6B5MCN3 397 aa9.9□□□□□ -0.83
SPTBN1-201ENST00000333896 LY6KQ17RY6 165 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms