RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 C11orf74Q86VG3 221 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 OR4D11Q8NGI4 311 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 OR1L3Q8NH93 324 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 TANKQ92844 425 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 MMABQ96EY8 250 aaPredicted RBP17.25■□□□□ 0.35
USP39-201ENST00000323701 SLC35A4Q96G79 324 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 COL21A1Q96P44 957 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 ANKRD60Q9BZ19 345 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 Q9H521 79 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 TMEFF2Q9UIK5 374 aaPredicted RBP17.25■□□□□ 0.35
USP39-201ENST00000323701 SPACA6W5XKT8 324 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 EME2A4GXA9 379 aaPredicted RBP17.24■□□□□ 0.35
USP39-201ENST00000323701 PCDHGA12O60330 932 aa17.24■□□□□ 0.35
USP39-201ENST00000323701 NSA2O95478 260 aaKnown RBP17.24■□□□□ 0.35
USP39-201ENST00000323701 CHN2P52757 468 aa17.24■□□□□ 0.35
USP39-201ENST00000323701 ELOAQ14241 798 aaKnown RBP17.24■□□□□ 0.35
USP39-201ENST00000323701 EXOSC7Q15024 291 aaKnown RBP17.24■□□□□ 0.35
USP39-201ENST00000323701 PRICKLE4Q2TBC4 344 aa17.24■□□□□ 0.35
USP39-201ENST00000323701 MFSD12Q6NUT3 480 aa17.24■□□□□ 0.35
USP39-201ENST00000323701 SHQ1Q6PI26 577 aaKnown RBP17.24■□□□□ 0.35
USP39-201ENST00000323701 BHLHB9Q6PI77 547 aa17.24■□□□□ 0.35
USP39-201ENST00000323701 CYP4Z1Q86W10 505 aa17.24■□□□□ 0.35
USP39-201ENST00000323701 RBM45Q8IUH3 476 aaKnown RBP17.24■□□□□ 0.35
USP39-201ENST00000323701 SVOPLQ8N434 492 aa17.24■□□□□ 0.35
USP39-201ENST00000323701 EID2Q8N6I1 236 aa17.24■□□□□ 0.35
USP39-201ENST00000323701 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.24■□□□□ 0.35
USP39-201ENST00000323701 TESMINQ9Y4I5 508 aa17.24■□□□□ 0.35
USP39-201ENST00000323701 A0A1W2PQM1 296 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 MITFO75030 526 aaPredicted RBP17.23■□□□□ 0.35
USP39-201ENST00000323701 H6PDO95479 791 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 FESP07332 822 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 PPP2R1BP30154 601 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 RRM2P31350 389 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 APLFQ8IW19 511 aaPredicted RBP17.23■□□□□ 0.35
USP39-201ENST00000323701 SLC30A8Q8IWU4 369 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 OFCC1Q8IZS5 231 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 LGI4Q8N135 537 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 MOAP1Q96BY2 351 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 SLC41A2Q96JW4 573 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 MAT2BQ9NZL9 334 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 SEMA5BQ9P283 1151 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 SAMHD1Q9Y3Z3 626 aaKnown RBP17.23■□□□□ 0.35
USP39-201ENST00000323701 ASCC3Q8N3C0 2202 aaKnown RBP17.23■□□□□ 0.35
USP39-201ENST00000323701 HRKO00198 91 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 FCMRO60667 390 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 OR2B3O76000 313 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 EPPINO95925 133 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 HOXB6P17509 224 aaKnown RBP17.23■□□□□ 0.35
USP39-201ENST00000323701 NT5EP21589 574 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 POLR2IP36954 125 aaKnown RBP17.23■□□□□ 0.35
USP39-201ENST00000323701 PIGAP37287 484 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 ADARB1P78563 741 aaKnown RBP17.23■□□□□ 0.35
USP39-201ENST00000323701 FOXD4Q12950 439 aaPredicted RBP17.23■□□□□ 0.35
USP39-201ENST00000323701 INAVAQ3KP66 663 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 TRIM61Q5EBN2 209 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 WDR74Q6RFH5 385 aaPredicted RBP17.23■□□□□ 0.35
USP39-201ENST00000323701 TTLL10Q6ZVT0 673 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 ARMC8Q8IUR7 673 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 LACC1Q8IV20 430 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 SAMD14Q8IZD0 417 aaPredicted RBP17.23■□□□□ 0.35
USP39-201ENST00000323701 D2HGDHQ8N465 521 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 LZICQ8WZA0 190 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 ZNF300Q96RE9 604 aaPredicted RBP17.23■□□□□ 0.35
USP39-201ENST00000323701 MBOAT4Q96T53 435 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 ACTRT3Q9BYD9 372 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 TOR3AQ9H497 397 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 DHCR7Q9UBM7 475 aaKnown RBP17.23■□□□□ 0.35
USP39-201ENST00000323701 FBXO4Q9UKT5 387 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 ZNF451Q9Y4E5 1061 aa17.23■□□□□ 0.35
USP39-201ENST00000323701 GPC6Q9Y625 555 aaPredicted RBP17.23■□□□□ 0.35
USP39-201ENST00000323701 ENO4A6NNW6 628 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 RNH1P13489 461 aaKnown RBP17.22■□□□□ 0.35
USP39-201ENST00000323701 MAOAP21397 527 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 OR1D4P47884 311 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 DAPP51397 102 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 DUSP8Q13202 625 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 NDUFA9Q16795 377 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 TCTE1Q5JU00 501 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 OR52J3Q8NH60 311 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 CDS1Q92903 461 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 MS4A4EQ96PG1 132 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 DUSP23Q9BVJ7 150 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 SLC38A1Q9H2H9 487 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 ADAP2Q9NPF8 381 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 BAG5Q9UL15 447 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 C19orf53Q9UNZ5 99 aaPredicted RBP17.22■□□□□ 0.35
USP39-201ENST00000323701 ADAMTS20P59510 1910 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 FER1L5A0AVI2 2057 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 FFAR1O14842 300 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 AHCYL1O43865 530 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 HS6ST1O60243 411 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 IFNA14P01570 189 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 THRBP10828 461 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 ACP2P11117 423 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 CCL7P80098 99 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 SLC13A2Q13183 592 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 NR0B2Q15466 257 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 DUSP5Q16690 384 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 GPAT3Q53EU6 434 aa17.22■□□□□ 0.35
USP39-201ENST00000323701 GARNL3Q5VVW2 1013 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms