RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 ZBTB44Q8NCP5 570 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 PKMYT1Q99640 499 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 VRK1Q99986 396 aaPredicted RBP6.75□□□□□ -1.33
SMC1A-201ENST00000322213 SYT11Q9BT88 431 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 SMPD4Q9NXE4 827 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 GSKIPQ9P0R6 139 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 SLC27A6Q9Y2P4 619 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 ARVCFO00192 962 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 SCO2O43819 266 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 KCNJ13O60928 360 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 C21orf33P30042 268 aaPredicted RBP6.75□□□□□ -1.33
SMC1A-201ENST00000322213 CHRNA4P43681 627 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 MLLT1Q03111 559 aaPredicted RBP6.75□□□□□ -1.33
SMC1A-201ENST00000322213 GNMTQ14749 295 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 WASH2PQ6VEQ5 465 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 FBXL6Q8N531 539 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 OR56A1Q8NGH5 318 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 OR10Z1Q8NGY1 313 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 OR4Q3Q8NH05 313 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 CLEC4CQ8WTT0 213 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 NT5C3BQ969T7 300 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 FYTTD1Q96QD9 318 aaKnown RBP6.75□□□□□ -1.33
SMC1A-201ENST00000322213 METTL17Q9H7H0 456 aaPredicted RBP6.75□□□□□ -1.33
SMC1A-201ENST00000322213 IGSF5Q9NSI5 407 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 TMEM248Q9NWD8 314 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 A0A1W2PQH9 124 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 OR51F1A6NGY5 319 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 TTLL8A6PVC2 850 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 MSR1P21757 451 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 ATXN1P54253 815 aaKnown RBP6.74□□□□□ -1.33
SMC1A-201ENST00000322213 C16orf59Q7L2K0 433 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 DBF4BQ8NFT6 615 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 OR6F1Q8NGZ6 308 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 RADILQ96JH8 1075 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 PIM2Q9P1W9 311 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 CNOT1A5YKK6 2376 aaKnown RBP6.74□□□□□ -1.33
SMC1A-201ENST00000322213 RFXAPO00287 272 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 TO15178 435 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 RENP00797 406 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 ADORA3P0DMS8 318 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 NDUFV1P49821 464 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 DLX5P56178 289 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 BTG1P62324 171 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 ABRAXAS2Q15018 415 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 RBMS2Q15434 407 aaKnown RBP6.74□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF676Q8N7Q3 588 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 TMEM174Q8WUU8 243 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 RGMAQ96B86 450 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 TREX2Q9BQ50 279 aaPredicted RBP6.74□□□□□ -1.33
SMC1A-201ENST00000322213 IER2Q9BTL4 223 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 CDHR4A6H8M9 788 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 NUDT19A8MXV4 375 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 FABP7O15540 132 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 ERAL1O75616 437 aaKnown RBP6.74□□□□□ -1.33
SMC1A-201ENST00000322213 ALDH2P05091 517 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 GIMD1P0DJR0 217 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 HOXD10P28358 340 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 DLSTP36957 453 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 OR12D2P58182 307 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 FOXRED2Q8IWF2 684 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 C7orf57Q8NEG2 295 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 TET1Q8NFU7 2136 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 OR5AK3PQ8NH89 298 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 PSMG2Q969U7 264 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 C7orf34Q96L11 122 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 MFFQ9GZY8 342 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 SYT4Q9H2B2 425 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 NDRG3Q9UGV2 375 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 CYB5R1Q9UHQ9 305 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 CDK14O94921 469 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 ALPPL2P10696 532 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 DCTP40126 519 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 VSX2P58304 361 aaPredicted RBP6.74□□□□□ -1.33
SMC1A-201ENST00000322213 RAB8AP61006 207 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 ARF3P61204 181 aaPredicted RBP6.74□□□□□ -1.33
SMC1A-201ENST00000322213 ARF1P84077 181 aaKnown RBP6.74□□□□□ -1.33
SMC1A-201ENST00000322213 VLDLRP98155 873 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 FAM171A1Q5VUB5 890 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 SLC39A4Q6P5W5 647 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 COX18Q8N8Q8 333 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 C20orf85Q9H1P6 137 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 WDR26Q9H7D7 661 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 WRAP73Q9P2S5 460 aaPredicted RBP6.74□□□□□ -1.33
SMC1A-201ENST00000322213 GTF2IRD1Q9UHL9 959 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF670-ZNF695F2Z2N8 137 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 MECP2P51608 486 aaKnown RBP6.74□□□□□ -1.33
SMC1A-201ENST00000322213 AFF3P51826 1226 aaKnown RBP6.74□□□□□ -1.33
SMC1A-201ENST00000322213 RNF4P78317 190 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 RAET1GQ6H3X3 334 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 NOXRED1Q6NXP6 359 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 COQ8BQ96D53 544 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 CARS2Q9HA77 564 aaKnown RBP6.74□□□□□ -1.33
SMC1A-201ENST00000322213 DCAF16Q9NXF7 216 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 ZFR2Q9UPR6 939 aaKnown RBP6.74□□□□□ -1.33
SMC1A-201ENST00000322213 TNCP24821 2201 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 DUXAA6NLW8 204 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 PSMD9O00233 223 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 P2RX6O15547 441 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 ADAP00813 363 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 MEOX2P50222 304 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms